RNA–Protein interactions for RNA: ENST00000484203.5

PTCD3-215, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 2

Gene PTCD3, Length 928 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-215ENST00000484203 RLIMQ9NVW2 624 aa5.42□□□□□ -1.54
PTCD3-215ENST00000484203 CISD1Q9NZ45 108 aaKnown RBP5.42□□□□□ -1.54
PTCD3-215ENST00000484203 CCDC167Q9P0B6 97 aa5.42□□□□□ -1.54
PTCD3-215ENST00000484203 NIPSNAP3AQ9UFN0 247 aaPredicted RBP5.42□□□□□ -1.54
PTCD3-215ENST00000484203 TESQ9UGI8 421 aaKnown RBP5.42□□□□□ -1.54
PTCD3-215ENST00000484203 LEF1Q9UJU2 399 aaPredicted RBP5.42□□□□□ -1.54
PTCD3-215ENST00000484203 POU2F3Q9UKI9 436 aa5.42□□□□□ -1.54
PTCD3-215ENST00000484203 LAMP3Q9UQV4 416 aa5.42□□□□□ -1.54
PTCD3-215ENST00000484203 RCE1Q9Y256 329 aa5.42□□□□□ -1.54
PTCD3-215ENST00000484203 ANGPT4Q9Y264 503 aa5.42□□□□□ -1.54
PTCD3-215ENST00000484203 B3GALT5Q9Y2C3 310 aa5.42□□□□□ -1.54
PTCD3-215ENST00000484203 FLVCR1Q9Y5Y0 555 aa5.42□□□□□ -1.54
PTCD3-215ENST00000484203 ARID1AO14497 2285 aa5.42□□□□□ -1.54
PTCD3-215ENST00000484203 ATRQ13535 2644 aa5.42□□□□□ -1.54
PTCD3-215ENST00000484203 HCFC1P51610 2035 aa5.41□□□□□ -1.54
PTCD3-215ENST00000484203 MPDZO75970 2070 aa5.41□□□□□ -1.54
PTCD3-215ENST00000484203 ZNF587BE7ETH6 402 aa5.41□□□□□ -1.54
PTCD3-215ENST00000484203 OVOL3O00110 214 aa5.41□□□□□ -1.54
PTCD3-215ENST00000484203 NR5A2O00482 541 aa5.41□□□□□ -1.54
PTCD3-215ENST00000484203 AP3D1O14617 1153 aa5.41□□□□□ -1.54
PTCD3-215ENST00000484203 AIM2O14862 343 aa5.41□□□□□ -1.54
PTCD3-215ENST00000484203 NPIPB7O75200 414 aa5.41□□□□□ -1.54
PTCD3-215ENST00000484203 BCAS1O75363 584 aaPredicted RBP5.41□□□□□ -1.54
PTCD3-215ENST00000484203 RAD51DO75771 328 aa5.41□□□□□ -1.54
PTCD3-215ENST00000484203 NPPAP01160 153 aa5.41□□□□□ -1.54
PTCD3-215ENST00000484203 IFNA14P01570 189 aa5.41□□□□□ -1.54
PTCD3-215ENST00000484203 HEXAP06865 529 aa5.41□□□□□ -1.54
PTCD3-215ENST00000484203 DANCRP0C864 163 aa5.41□□□□□ -1.54
PTCD3-215ENST00000484203 TROVE2P10155 538 aaKnown RBP eCLIP5.41□□□□□ -1.54
PTCD3-215ENST00000484203 ZNF43P17038 809 aa5.41□□□□□ -1.54
PTCD3-215ENST00000484203 CCNA2P20248 432 aa5.41□□□□□ -1.54
PTCD3-215ENST00000484203 CDH11P55287 796 aa5.41□□□□□ -1.54
PTCD3-215ENST00000484203 CHRNB3Q05901 458 aa5.41□□□□□ -1.54
PTCD3-215ENST00000484203 FAPQ12884 760 aa5.41□□□□□ -1.54
PTCD3-215ENST00000484203 C1DQ13901 141 aaKnown RBP5.41□□□□□ -1.54
PTCD3-215ENST00000484203 CEACAM7Q14002 265 aa5.41□□□□□ -1.54
PTCD3-215ENST00000484203 CYLC2Q14093 348 aaPredicted RBP5.41□□□□□ -1.54
PTCD3-215ENST00000484203 MAPRE2Q15555 327 aa5.41□□□□□ -1.54
PTCD3-215ENST00000484203 OR7A5Q15622 319 aa5.41□□□□□ -1.54
PTCD3-215ENST00000484203 C3orf36Q3SXR2 165 aa5.41□□□□□ -1.54
PTCD3-215ENST00000484203 AGKQ53H12 422 aa5.41□□□□□ -1.54
PTCD3-215ENST00000484203 COQ5Q5HYK3 327 aa5.41□□□□□ -1.54
PTCD3-215ENST00000484203 FAM69AQ5T7M9 428 aa5.41□□□□□ -1.54
PTCD3-215ENST00000484203 SLC2A7Q6PXP3 512 aa5.41□□□□□ -1.54
PTCD3-215ENST00000484203 SLC22A25Q6T423 547 aa5.41□□□□□ -1.54
PTCD3-215ENST00000484203 H1FNTQ75WM6 255 aaPredicted RBP5.41□□□□□ -1.54
PTCD3-215ENST00000484203 OLIG3Q7RTU3 272 aa5.41□□□□□ -1.54
PTCD3-215ENST00000484203 PATL1Q86TB9 770 aaKnown RBP5.41□□□□□ -1.54
PTCD3-215ENST00000484203 GPAT4Q86UL3 456 aa5.41□□□□□ -1.54
PTCD3-215ENST00000484203 DTX2Q86UW9 622 aa5.41□□□□□ -1.54
PTCD3-215ENST00000484203 VRK2Q86Y07 508 aa5.41□□□□□ -1.54
PTCD3-215ENST00000484203 ARMC8Q8IUR7 673 aa5.41□□□□□ -1.54
PTCD3-215ENST00000484203 FBXL14Q8N1E6 418 aa5.41□□□□□ -1.54
PTCD3-215ENST00000484203 CLIP4Q8N3C7 705 aa5.41□□□□□ -1.54
PTCD3-215ENST00000484203 DPP10Q8N608 796 aa5.41□□□□□ -1.54
PTCD3-215ENST00000484203 C11orf65Q8NCR3 313 aa5.41□□□□□ -1.54
PTCD3-215ENST00000484203 ADPRHL1Q8NDY3 354 aa5.41□□□□□ -1.54
PTCD3-215ENST00000484203 IL17RDQ8NFM7 739 aa5.41□□□□□ -1.54
PTCD3-215ENST00000484203 OR9K2Q8NGE7 335 aa5.41□□□□□ -1.54
PTCD3-215ENST00000484203 OR52E4Q8NGH9 312 aa5.41□□□□□ -1.54
PTCD3-215ENST00000484203 OR9I1Q8NGQ6 314 aa5.41□□□□□ -1.54
PTCD3-215ENST00000484203 MAGEE2Q8TD90 523 aaPredicted RBP5.41□□□□□ -1.54
PTCD3-215ENST00000484203 CKAP2Q8WWK9 683 aa5.41□□□□□ -1.54
PTCD3-215ENST00000484203 C3orf49Q96BT1 292 aa5.41□□□□□ -1.54
PTCD3-215ENST00000484203 ZNF524Q96C55 264 aa5.41□□□□□ -1.54
PTCD3-215ENST00000484203 AURKBQ96GD4 344 aaPredicted RBP5.41□□□□□ -1.54
PTCD3-215ENST00000484203 Q96MF0 132 aa5.41□□□□□ -1.54
PTCD3-215ENST00000484203 HS6ST2Q96MM7 605 aa5.41□□□□□ -1.54
PTCD3-215ENST00000484203 DHRS9Q9BPW9 319 aa5.41□□□□□ -1.54
PTCD3-215ENST00000484203 LINC00470Q9BZP3 86 aa5.41□□□□□ -1.54
PTCD3-215ENST00000484203 DENND2DQ9H6A0 471 aaPredicted RBP5.41□□□□□ -1.54
PTCD3-215ENST00000484203 SLCO1B3Q9NPD5 702 aa5.41□□□□□ -1.54
PTCD3-215ENST00000484203 SLC6A13Q9NSD5 602 aa5.41□□□□□ -1.54
PTCD3-215ENST00000484203 PRSS50Q9UI38 385 aa5.41□□□□□ -1.54
PTCD3-215ENST00000484203 AP3M1Q9Y2T2 418 aa5.41□□□□□ -1.54
PTCD3-215ENST00000484203 NDUFAF1Q9Y375 327 aa5.41□□□□□ -1.54
PTCD3-215ENST00000484203 SLC25A15Q9Y619 301 aa5.41□□□□□ -1.54
PTCD3-215ENST00000484203 DOCK7Q96N67 2140 aa5.41□□□□□ -1.54
PTCD3-215ENST00000484203 TRAV36DV7A0A075B6V5 113 aa5.4□□□□□ -1.54
PTCD3-215ENST00000484203 HTR3EA5X5Y0 456 aa5.4□□□□□ -1.54
PTCD3-215ENST00000484203 DPRXA6NFQ7 191 aa5.4□□□□□ -1.54
PTCD3-215ENST00000484203 BBIP1A8MTZ0 92 aa5.4□□□□□ -1.54
PTCD3-215ENST00000484203 RPL36A-HNRNPH2H7BZ11 118 aa5.4□□□□□ -1.54
PTCD3-215ENST00000484203 PDLIM1O00151 329 aa5.4□□□□□ -1.54
PTCD3-215ENST00000484203 ABCD4O14678 606 aa5.4□□□□□ -1.54
PTCD3-215ENST00000484203 FRS3O43559 492 aa5.4□□□□□ -1.54
PTCD3-215ENST00000484203 FZD7O75084 574 aa5.4□□□□□ -1.54
PTCD3-215ENST00000484203 SLC43A1O75387 559 aa5.4□□□□□ -1.54
PTCD3-215ENST00000484203 AKR7A3O95154 331 aa5.4□□□□□ -1.54
PTCD3-215ENST00000484203 MT-ATP6P00846 226 aa5.4□□□□□ -1.54
PTCD3-215ENST00000484203 CRYAAP02489 173 aa5.4□□□□□ -1.54
PTCD3-215ENST00000484203 AMY2AP04746 511 aa5.4□□□□□ -1.54
PTCD3-215ENST00000484203 ERCC1P07992 297 aaPredicted RBP5.4□□□□□ -1.54
PTCD3-215ENST00000484203 CSF3P09919 207 aa5.4□□□□□ -1.54
PTCD3-215ENST00000484203 GKN3PP0CG01 181 aa5.4□□□□□ -1.54
PTCD3-215ENST00000484203 AMY2BP19961 511 aa5.4□□□□□ -1.54
PTCD3-215ENST00000484203 CD40P25942 277 aa5.4□□□□□ -1.54
PTCD3-215ENST00000484203 IFNA8P32881 189 aa5.4□□□□□ -1.54
PTCD3-215ENST00000484203 RGS8P57771 180 aaPredicted RBP5.4□□□□□ -1.54
PTCD3-215ENST00000484203 UBE2NP61088 152 aaKnown RBP5.4□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms