RNA–Protein interactions for RNA: ENST00000480744.2

LIMS3-203, Transcript of LIM zinc finger domain containing 3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene LIMS3, Length 1,197 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS3-203ENST00000480744 hCG_2039718K7EN88 272 aa13.22□□□□□ -0.29
LIMS3-203ENST00000480744 NDUFS8O00217 210 aa13.22□□□□□ -0.29
LIMS3-203ENST00000480744 LMX1BO60663 402 aa13.22□□□□□ -0.29
LIMS3-203ENST00000480744 FZD7O75084 574 aa13.22□□□□□ -0.29
LIMS3-203ENST00000480744 SERPINB7O75635 380 aa13.22□□□□□ -0.29
LIMS3-203ENST00000480744 SERPINI2O75830 405 aa13.22□□□□□ -0.29
LIMS3-203ENST00000480744 IGKV3-15P01624 115 aa13.22□□□□□ -0.29
LIMS3-203ENST00000480744 HLA-DOBP13765 273 aa13.22□□□□□ -0.29
LIMS3-203ENST00000480744 APEHP13798 732 aaKnown RBP13.22□□□□□ -0.29
LIMS3-203ENST00000480744 NPR2P20594 1047 aa13.22□□□□□ -0.29
LIMS3-203ENST00000480744 THBS4P35443 961 aa13.22□□□□□ -0.29
LIMS3-203ENST00000480744 ARR3P36575 388 aa13.22□□□□□ -0.29
LIMS3-203ENST00000480744 POU3F1Q03052 451 aaPredicted RBP13.22□□□□□ -0.29
LIMS3-203ENST00000480744 HGFACQ04756 655 aa13.22□□□□□ -0.29
LIMS3-203ENST00000480744 PMS2P3Q13401 168 aa13.22□□□□□ -0.29
LIMS3-203ENST00000480744 SQLEQ14534 574 aa13.22□□□□□ -0.29
LIMS3-203ENST00000480744 MFSD13AQ14CX5 517 aa13.22□□□□□ -0.29
LIMS3-203ENST00000480744 EFNB3Q15768 340 aa13.22□□□□□ -0.29
LIMS3-203ENST00000480744 MS4A18Q3C1V0 323 aa13.22□□□□□ -0.29
LIMS3-203ENST00000480744 PHYHD1Q5SRE7 291 aa13.22□□□□□ -0.29
LIMS3-203ENST00000480744 SPATA21Q7Z572 469 aa13.22□□□□□ -0.29
LIMS3-203ENST00000480744 RANBP3LQ86VV4 465 aaPredicted RBP13.22□□□□□ -0.29
LIMS3-203ENST00000480744 TMEM123Q8N131 208 aa13.22□□□□□ -0.29
LIMS3-203ENST00000480744 SVOPLQ8N434 492 aa13.22□□□□□ -0.29
LIMS3-203ENST00000480744 ARIH2OSQ8N7S6 290 aa13.22□□□□□ -0.29
LIMS3-203ENST00000480744 FAM169BQ8N8A8 192 aa13.22□□□□□ -0.29
LIMS3-203ENST00000480744 ADPRHL1Q8NDY3 354 aa13.22□□□□□ -0.29
LIMS3-203ENST00000480744 HIPK4Q8NE63 616 aa13.22□□□□□ -0.29
LIMS3-203ENST00000480744 NUP37Q8NFH4 326 aa13.22□□□□□ -0.29
LIMS3-203ENST00000480744 THOC1Q96FV9 657 aaKnown RBP13.22□□□□□ -0.29
LIMS3-203ENST00000480744 RAB1BQ9H0U4 201 aa13.22□□□□□ -0.29
LIMS3-203ENST00000480744 PLK3Q9H4B4 646 aa13.22□□□□□ -0.29
LIMS3-203ENST00000480744 TMEM38AQ9H6F2 299 aa13.22□□□□□ -0.29
LIMS3-203ENST00000480744 MYOZ1Q9NP98 299 aaPredicted RBP13.22□□□□□ -0.29
LIMS3-203ENST00000480744 SLC52A3Q9NQ40 469 aa13.22□□□□□ -0.29
LIMS3-203ENST00000480744 MED29Q9NX70 200 aa13.22□□□□□ -0.29
LIMS3-203ENST00000480744 LPAR3Q9UBY5 353 aa13.22□□□□□ -0.29
LIMS3-203ENST00000480744 USP22Q9UPT9 525 aa13.22□□□□□ -0.29
LIMS3-203ENST00000480744 CORINQ9Y5Q5 1042 aa13.22□□□□□ -0.29
LIMS3-203ENST00000480744 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP13.22□□□□□ -0.29
LIMS3-203ENST00000480744 TRBV5-3A0A0A0MS03 114 aa13.21□□□□□ -0.29
LIMS3-203ENST00000480744 IGHV2OR16-5A0A0B4J2B6 119 aa13.21□□□□□ -0.29
LIMS3-203ENST00000480744 A0A0B4J2E0 115 aa13.21□□□□□ -0.29
LIMS3-203ENST00000480744 IGHV4-61A0A0C4DH41 118 aa13.21□□□□□ -0.29
LIMS3-203ENST00000480744 LOC100289279A0A1B0GTE1 492 aa13.21□□□□□ -0.29
LIMS3-203ENST00000480744 A0A1B0GX12 115 aa13.21□□□□□ -0.29
LIMS3-203ENST00000480744 SH3PXD2BA1X283 911 aa13.21□□□□□ -0.29
LIMS3-203ENST00000480744 ZNF99A8MXY4 864 aaPredicted RBP13.21□□□□□ -0.29
LIMS3-203ENST00000480744 LRRN3E7EW58 273 aa13.21□□□□□ -0.29
LIMS3-203ENST00000480744 PHF1O43189 567 aaPredicted RBP13.21□□□□□ -0.29
LIMS3-203ENST00000480744 ATP8B1O43520 1251 aa13.21□□□□□ -0.29
LIMS3-203ENST00000480744 BGLAPP02818 100 aa13.21□□□□□ -0.29
LIMS3-203ENST00000480744 CD79AP11912 226 aa13.21□□□□□ -0.29
LIMS3-203ENST00000480744 GPX2P18283 190 aa13.21□□□□□ -0.29
LIMS3-203ENST00000480744 PPOXP50336 477 aa13.21□□□□□ -0.29
LIMS3-203ENST00000480744 FAM166AQ6J272 317 aa13.21□□□□□ -0.29
LIMS3-203ENST00000480744 IL17RELQ6ZVW7 336 aa13.21□□□□□ -0.29
LIMS3-203ENST00000480744 PHC2Q8IXK0 858 aa13.21□□□□□ -0.29
LIMS3-203ENST00000480744 C20orf196Q8IYI0 205 aa13.21□□□□□ -0.29
LIMS3-203ENST00000480744 SMYD1Q8NB12 490 aa13.21□□□□□ -0.29
LIMS3-203ENST00000480744 BHLHE22Q8NFJ8 381 aaPredicted RBP13.21□□□□□ -0.29
LIMS3-203ENST00000480744 OR6N1Q8NGY5 312 aa13.21□□□□□ -0.29
LIMS3-203ENST00000480744 TMEM158Q8WZ71 300 aa13.21□□□□□ -0.29
LIMS3-203ENST00000480744 TXNDC15Q96J42 360 aa13.21□□□□□ -0.29
LIMS3-203ENST00000480744 ANKRD27Q96NW4 1050 aa13.21□□□□□ -0.29
LIMS3-203ENST00000480744 MOGAT1Q96PD6 335 aa13.21□□□□□ -0.29
LIMS3-203ENST00000480744 WFDC6Q9BQY6 131 aa13.21□□□□□ -0.29
LIMS3-203ENST00000480744 CPPED1Q9BRF8 314 aaPredicted RBP13.21□□□□□ -0.29
LIMS3-203ENST00000480744 ZNF442Q9H7R0 627 aa13.21□□□□□ -0.29
LIMS3-203ENST00000480744 DYNLRB1Q9NP97 96 aa13.21□□□□□ -0.29
LIMS3-203ENST00000480744 MED4Q9NPJ6 270 aa13.21□□□□□ -0.29
LIMS3-203ENST00000480744 B3GAT2Q9NPZ5 323 aa13.21□□□□□ -0.29
LIMS3-203ENST00000480744 TMEM160Q9NX00 188 aa13.21□□□□□ -0.29
LIMS3-203ENST00000480744 KCNS2Q9ULS6 477 aa13.21□□□□□ -0.29
LIMS3-203ENST00000480744 FBN3Q75N90 2809 aa13.21□□□□□ -0.3
LIMS3-203ENST00000480744 LOC102725191A0A1B0GVB3 256 aa13.2□□□□□ -0.3
LIMS3-203ENST00000480744 SLC35F4A4IF30 521 aa13.2□□□□□ -0.3
LIMS3-203ENST00000480744 ZNF726A6NNF4 738 aa13.2□□□□□ -0.3
LIMS3-203ENST00000480744 M0R3H8 397 aa13.2□□□□□ -0.3
LIMS3-203ENST00000480744 TPST2O60704 377 aa13.2□□□□□ -0.3
LIMS3-203ENST00000480744 EDF1O60869 148 aaKnown RBP13.2□□□□□ -0.3
LIMS3-203ENST00000480744 HLA-HP01893 362 aa13.2□□□□□ -0.3
LIMS3-203ENST00000480744 OPN1SWP03999 348 aa13.2□□□□□ -0.3
LIMS3-203ENST00000480744 ERCC1P07992 297 aaPredicted RBP13.2□□□□□ -0.3
LIMS3-203ENST00000480744 AHCYP23526 432 aa13.2□□□□□ -0.3
LIMS3-203ENST00000480744 ATP4BP51164 291 aa13.2□□□□□ -0.3
LIMS3-203ENST00000480744 CDH12P55289 794 aa13.2□□□□□ -0.3
LIMS3-203ENST00000480744 PIGFQ07326 219 aa13.2□□□□□ -0.3
LIMS3-203ENST00000480744 PUDPQ08623 228 aa13.2□□□□□ -0.3
LIMS3-203ENST00000480744 SNTB2Q13425 540 aaKnown RBP13.2□□□□□ -0.3
LIMS3-203ENST00000480744 CAMK2DQ13557 499 aa13.2□□□□□ -0.3
LIMS3-203ENST00000480744 DAG1Q14118 895 aa13.2□□□□□ -0.3
LIMS3-203ENST00000480744 ADRM1Q16186 407 aa13.2□□□□□ -0.3
LIMS3-203ENST00000480744 CYP51A1Q16850 503 aa13.2□□□□□ -0.3
LIMS3-203ENST00000480744 KRT80Q6KB66 452 aa13.2□□□□□ -0.3
LIMS3-203ENST00000480744 ZNF813Q6ZN06 617 aa13.2□□□□□ -0.3
LIMS3-203ENST00000480744 DHDDSQ86SQ9 333 aa13.2□□□□□ -0.3
LIMS3-203ENST00000480744 CCDC36Q8IYA8 594 aa13.2□□□□□ -0.3
LIMS3-203ENST00000480744 ZCCHC24Q8N2G6 241 aaKnown RBP13.2□□□□□ -0.3
LIMS3-203ENST00000480744 SCAIQ8N9R8 606 aa13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms