RNA–Protein interactions for RNA: ENST00000479501.5

COL20A1-206, Transcript of collagen type XX alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL20A1, Length 4,536 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL20A1-206ENST00000479501 SLC2A10O95528 541 aa13.19□□□□□ -0.3
COL20A1-206ENST00000479501 BMP1P13497 986 aa13.19□□□□□ -0.3
COL20A1-206ENST00000479501 LPAL2Q16609 132 aa13.19□□□□□ -0.3
COL20A1-206ENST00000479501 TMEM244Q5VVB8 128 aa13.19□□□□□ -0.3
COL20A1-206ENST00000479501 FCRLAQ7L513 359 aa13.19□□□□□ -0.3
COL20A1-206ENST00000479501 CA13Q8N1Q1 262 aa13.19□□□□□ -0.3
COL20A1-206ENST00000479501 C12orf45Q8N5I9 185 aaPredicted RBP13.19□□□□□ -0.3
COL20A1-206ENST00000479501 IL22RA1Q8N6P7 574 aa13.19□□□□□ -0.3
COL20A1-206ENST00000479501 HOXB13Q92826 284 aaPredicted RBP13.19□□□□□ -0.3
COL20A1-206ENST00000479501 NEURL2Q9BR09 285 aa13.19□□□□□ -0.3
COL20A1-206ENST00000479501 PRMT8Q9NR22 394 aaPredicted RBP13.19□□□□□ -0.3
COL20A1-206ENST00000479501 MYEF2Q9P2K5 600 aaKnown RBP13.19□□□□□ -0.3
COL20A1-206ENST00000479501 KDM4EB2RXH2 506 aaPredicted RBP13.19□□□□□ -0.3
COL20A1-206ENST00000479501 NPIPB8E9PQR5 432 aa13.19□□□□□ -0.3
COL20A1-206ENST00000479501 SYNGR4O95473 234 aa13.19□□□□□ -0.3
COL20A1-206ENST00000479501 NFYAP23511 347 aaPredicted RBP13.19□□□□□ -0.3
COL20A1-206ENST00000479501 OR1D5P58170 312 aa13.19□□□□□ -0.3
COL20A1-206ENST00000479501 ZNF585AQ6P3V2 769 aa13.19□□□□□ -0.3
COL20A1-206ENST00000479501 GIMAP5Q96F15 307 aa13.19□□□□□ -0.3
COL20A1-206ENST00000479501 PHF7Q9BWX1 381 aaPredicted RBP13.19□□□□□ -0.3
COL20A1-206ENST00000479501 SLC25A19Q9HC21 320 aa13.19□□□□□ -0.3
COL20A1-206ENST00000479501 CMC2Q9NRP2 79 aa13.19□□□□□ -0.3
COL20A1-206ENST00000479501 MAN2C1Q9NTJ4 1040 aa13.19□□□□□ -0.3
COL20A1-206ENST00000479501 B3GNT2Q9NY97 397 aa13.19□□□□□ -0.3
COL20A1-206ENST00000479501 A4GNTQ9UNA3 340 aa13.19□□□□□ -0.3
COL20A1-206ENST00000479501 HIF3AQ9Y2N7 669 aa13.19□□□□□ -0.3
COL20A1-206ENST00000479501 SUSD5O60279 629 aa13.19□□□□□ -0.3
COL20A1-206ENST00000479501 GMDSO60547 372 aa13.19□□□□□ -0.3
COL20A1-206ENST00000479501 IFNA17P01571 189 aa13.19□□□□□ -0.3
COL20A1-206ENST00000479501 AKAIN1P0CW23 69 aa13.19□□□□□ -0.3
COL20A1-206ENST00000479501 RBMS1P29558 406 aaKnown RBP13.19□□□□□ -0.3
COL20A1-206ENST00000479501 LUMP51884 338 aaPredicted RBP13.19□□□□□ -0.3
COL20A1-206ENST00000479501 PLP2Q04941 152 aa13.19□□□□□ -0.3
COL20A1-206ENST00000479501 PXDC1Q5TGL8 231 aa13.19□□□□□ -0.3
COL20A1-206ENST00000479501 ADGRF3Q8IZF5 1079 aa13.19□□□□□ -0.3
COL20A1-206ENST00000479501 SLC25A46Q96AG3 418 aa13.19□□□□□ -0.3
COL20A1-206ENST00000479501 OPALINQ96PE5 141 aa13.19□□□□□ -0.3
COL20A1-206ENST00000479501 KCNJ16Q9NPI9 418 aa13.19□□□□□ -0.3
COL20A1-206ENST00000479501 SLAMF7Q9NQ25 335 aa13.19□□□□□ -0.3
COL20A1-206ENST00000479501 NDUFB11Q9NX14 153 aa13.19□□□□□ -0.3
COL20A1-206ENST00000479501 B4GALT7Q9UBV7 327 aa13.19□□□□□ -0.3
COL20A1-206ENST00000479501 MEIS3P1A6NDR6 274 aa13.18□□□□□ -0.3
COL20A1-206ENST00000479501 YY2O15391 372 aa13.18□□□□□ -0.3
COL20A1-206ENST00000479501 TPT1P13693 172 aaKnown RBP13.18□□□□□ -0.3
COL20A1-206ENST00000479501 P2RY14Q15391 338 aa13.18□□□□□ -0.3
COL20A1-206ENST00000479501 SLC35D2Q76EJ3 337 aa13.18□□□□□ -0.3
COL20A1-206ENST00000479501 C10orf111Q8N326 155 aa13.18□□□□□ -0.3
COL20A1-206ENST00000479501 GPR137CQ8N3F9 429 aa13.18□□□□□ -0.3
COL20A1-206ENST00000479501 GPR32P1Q8NGA4 272 aa13.18□□□□□ -0.3
COL20A1-206ENST00000479501 SLC2A12Q8TD20 617 aa13.18□□□□□ -0.3
COL20A1-206ENST00000479501 ZNF416Q9BWM5 594 aa13.18□□□□□ -0.3
COL20A1-206ENST00000479501 SULT1C2O00338 296 aa13.18□□□□□ -0.3
COL20A1-206ENST00000479501 TCRBP04435 133 aa13.18□□□□□ -0.3
COL20A1-206ENST00000479501 POLR2HP52434 150 aaKnown RBP13.18□□□□□ -0.3
COL20A1-206ENST00000479501 PCBP4P57723 403 aaKnown RBP13.18□□□□□ -0.3
COL20A1-206ENST00000479501 DYRK1AQ13627 763 aa13.18□□□□□ -0.3
COL20A1-206ENST00000479501 OR14L1PQ8NHC6 308 aa13.18□□□□□ -0.3
COL20A1-206ENST00000479501 PAQR8Q8TEZ7 354 aa13.18□□□□□ -0.3
COL20A1-206ENST00000479501 RASD2Q96D21 266 aa13.18□□□□□ -0.3
COL20A1-206ENST00000479501 LRRC3BQ96PB8 259 aa13.18□□□□□ -0.3
COL20A1-206ENST00000479501 PSD2Q9BQI7 771 aa13.18□□□□□ -0.3
COL20A1-206ENST00000479501 GSX2Q9BZM3 304 aa13.18□□□□□ -0.3
COL20A1-206ENST00000479501 RNF215Q9Y6U7 377 aa13.18□□□□□ -0.3
COL20A1-206ENST00000479501 TMEM269A0A1B0GVZ9 245 aa13.18□□□□□ -0.3
COL20A1-206ENST00000479501 ATP6V1G2-DDX39BF2Z307 99 aa13.18□□□□□ -0.3
COL20A1-206ENST00000479501 GABRG2P18507 467 aa13.18□□□□□ -0.3
COL20A1-206ENST00000479501 BTG2P78543 158 aa13.18□□□□□ -0.3
COL20A1-206ENST00000479501 DBPQ10586 325 aaPredicted RBP13.18□□□□□ -0.3
COL20A1-206ENST00000479501 SMAD2Q15796 467 aaKnown RBP13.18□□□□□ -0.3
COL20A1-206ENST00000479501 AKR1C8PQ5T2L2 129 aa13.18□□□□□ -0.3
COL20A1-206ENST00000479501 PAPD4Q6PIY7 484 aaKnown RBP13.18□□□□□ -0.3
COL20A1-206ENST00000479501 NT5CQ8TCD5 201 aa13.18□□□□□ -0.3
COL20A1-206ENST00000479501 ASB17Q8WXJ9 295 aa13.18□□□□□ -0.3
COL20A1-206ENST00000479501 KIAA1143Q96AT1 154 aaPredicted RBP13.18□□□□□ -0.3
COL20A1-206ENST00000479501 FAM71F1Q96KD3 344 aaPredicted RBP13.18□□□□□ -0.3
COL20A1-206ENST00000479501 NEDD4LQ96PU5 975 aa13.18□□□□□ -0.3
COL20A1-206ENST00000479501 TRAV36DV7A0A075B6V5 113 aa13.18□□□□□ -0.3
COL20A1-206ENST00000479501 A0A0A6YYH2 397 aa13.18□□□□□ -0.3
COL20A1-206ENST00000479501 TMEM221A6NGB7 291 aa13.18□□□□□ -0.3
COL20A1-206ENST00000479501 A6NJ64 397 aa13.18□□□□□ -0.3
COL20A1-206ENST00000479501 RAB40ALP0C0E4 278 aa13.18□□□□□ -0.3
COL20A1-206ENST00000479501 HMGA2P52926 109 aa13.18□□□□□ -0.3
COL20A1-206ENST00000479501 CXADRP78310 365 aa13.18□□□□□ -0.3
COL20A1-206ENST00000479501 PSPHP78330 225 aa13.18□□□□□ -0.3
COL20A1-206ENST00000479501 ELAVL1Q15717 326 aaKnown RBP13.18□□□□□ -0.3
COL20A1-206ENST00000479501 BEX5Q5H9J7 111 aa13.18□□□□□ -0.3
COL20A1-206ENST00000479501 ZMAT1Q5H9K5 638 aa13.18□□□□□ -0.3
COL20A1-206ENST00000479501 SLC16A9Q7RTY1 509 aa13.18□□□□□ -0.3
COL20A1-206ENST00000479501 RAB40AQ8WXH6 277 aa13.18□□□□□ -0.3
COL20A1-206ENST00000479501 TCEAL7Q9BRU2 100 aa13.18□□□□□ -0.3
COL20A1-206ENST00000479501 NRIP3Q9NQ35 241 aa13.18□□□□□ -0.3
COL20A1-206ENST00000479501 TMED7-TICAM2A0A0A6YYA0 188 aa13.17□□□□□ -0.3
COL20A1-206ENST00000479501 ZNF593O00488 134 aaPredicted RBP13.17□□□□□ -0.3
COL20A1-206ENST00000479501 IFNA5P01569 189 aa13.17□□□□□ -0.3
COL20A1-206ENST00000479501 CPEP16870 476 aa13.17□□□□□ -0.3
COL20A1-206ENST00000479501 AWAT2Q6E213 333 aa13.17□□□□□ -0.3
COL20A1-206ENST00000479501 RBPMSQ93062 196 aaKnown RBP13.17□□□□□ -0.3
COL20A1-206ENST00000479501 OR14A2Q96R54 314 aa13.17□□□□□ -0.3
COL20A1-206ENST00000479501 SLC7A11Q9UPY5 501 aa13.17□□□□□ -0.3
COL20A1-206ENST00000479501 YBX2Q9Y2T7 364 aaKnown RBP13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 71.6 ms