RNA–Protein interactions for RNA: ENST00000478693.1

SRRT-211, Transcript of serrate, RNA effector molecule, humanhuman

TSL 2

Gene SRRT, Length 655 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRT-211ENST00000478693 ANKDD1AQ495B1 522 aa10.06□□□□□ -0.8
SRRT-211ENST00000478693 ZBED5Q49AG3 693 aa10.06□□□□□ -0.8
SRRT-211ENST00000478693 TSPO2Q5TGU0 170 aa10.06□□□□□ -0.8
SRRT-211ENST00000478693 FBXW10Q5XX13 1052 aa10.06□□□□□ -0.8
SRRT-211ENST00000478693 ANKRD34AQ69YU3 496 aa10.06□□□□□ -0.8
SRRT-211ENST00000478693 ALKBH2Q6NS38 261 aa10.06□□□□□ -0.8
SRRT-211ENST00000478693 HMBOX1Q6NT76 420 aa10.06□□□□□ -0.8
SRRT-211ENST00000478693 TMPRSS11FQ6ZWK6 438 aa10.06□□□□□ -0.8
SRRT-211ENST00000478693 DMRTC2Q8IXT2 367 aaPredicted RBP10.06□□□□□ -0.8
SRRT-211ENST00000478693 STEAP2Q8NFT2 490 aa10.06□□□□□ -0.8
SRRT-211ENST00000478693 OR10G2Q8NGC3 310 aa10.06□□□□□ -0.8
SRRT-211ENST00000478693 GNPDA2Q8TDQ7 276 aa10.06□□□□□ -0.8
SRRT-211ENST00000478693 LIPHQ8WWY8 451 aa10.06□□□□□ -0.8
SRRT-211ENST00000478693 ZC3HAV1LQ96H79 300 aaKnown RBP10.06□□□□□ -0.8
SRRT-211ENST00000478693 ADAD1Q96M93 576 aaKnown RBP10.06□□□□□ -0.8
SRRT-211ENST00000478693 OR2M2Q96R28 347 aa10.06□□□□□ -0.8
SRRT-211ENST00000478693 POLDIP3Q9BY77 421 aaKnown RBP10.06□□□□□ -0.8
SRRT-211ENST00000478693 ACTR6Q9GZN1 396 aa10.06□□□□□ -0.8
SRRT-211ENST00000478693 SLC7A10Q9NS82 523 aa10.06□□□□□ -0.8
SRRT-211ENST00000478693 CCM2LQ9NUG4 571 aaPredicted RBP10.06□□□□□ -0.8
SRRT-211ENST00000478693 VNN3Q9NY84 501 aa10.06□□□□□ -0.8
SRRT-211ENST00000478693 HIF3AQ9Y2N7 669 aa10.06□□□□□ -0.8
SRRT-211ENST00000478693 AP4S1Q9Y587 144 aa10.06□□□□□ -0.8
SRRT-211ENST00000478693 POLEQ07864 2286 aa10.06□□□□□ -0.8
SRRT-211ENST00000478693 LOC102725191A0A1B0GVB3 256 aa10.05□□□□□ -0.8
SRRT-211ENST00000478693 SH3D21A4FU49 640 aa10.05□□□□□ -0.8
SRRT-211ENST00000478693 ERICH4A6NGS2 130 aa10.05□□□□□ -0.8
SRRT-211ENST00000478693 M0R3G1 203 aa10.05□□□□□ -0.8
SRRT-211ENST00000478693 CASKO14936 926 aa10.05□□□□□ -0.8
SRRT-211ENST00000478693 DEAF1O75398 565 aaPredicted RBP10.05□□□□□ -0.8
SRRT-211ENST00000478693 RAD51DO75771 328 aa10.05□□□□□ -0.8
SRRT-211ENST00000478693 NDUFB2O95178 105 aa10.05□□□□□ -0.8
SRRT-211ENST00000478693 CNOT4O95628 575 aaKnown RBP10.05□□□□□ -0.8
SRRT-211ENST00000478693 IGHG1P01857 330 aa10.05□□□□□ -0.8
SRRT-211ENST00000478693 IGHV1-2P23083 117 aa10.05□□□□□ -0.8
SRRT-211ENST00000478693 FPR3P25089 353 aa10.05□□□□□ -0.8
SRRT-211ENST00000478693 CCKARP32238 428 aa10.05□□□□□ -0.8
SRRT-211ENST00000478693 NTF4P34130 210 aa10.05□□□□□ -0.8
SRRT-211ENST00000478693 CSNK1A1P48729 337 aa10.05□□□□□ -0.8
SRRT-211ENST00000478693 CLRN1P58418 232 aa10.05□□□□□ -0.8
SRRT-211ENST00000478693 CTXN1P60606 82 aa10.05□□□□□ -0.8
SRRT-211ENST00000478693 LGALS3BPQ08380 585 aa10.05□□□□□ -0.8
SRRT-211ENST00000478693 ITGADQ13349 1161 aa10.05□□□□□ -0.8
SRRT-211ENST00000478693 CAMK2DQ13557 499 aa10.05□□□□□ -0.8
SRRT-211ENST00000478693 GK3PQ14409 553 aa10.05□□□□□ -0.8
SRRT-211ENST00000478693 P2RY6Q15077 328 aa10.05□□□□□ -0.8
SRRT-211ENST00000478693 PGBD2Q6P3X8 592 aa10.05□□□□□ -0.8
SRRT-211ENST00000478693 STAC2Q6ZMT1 411 aa10.05□□□□□ -0.8
SRRT-211ENST00000478693 BHLHA15Q7RTS1 189 aaPredicted RBP10.05□□□□□ -0.8
SRRT-211ENST00000478693 C10orf67Q8IYJ2 551 aa10.05□□□□□ -0.8
SRRT-211ENST00000478693 GABRG1Q8N1C3 465 aa10.05□□□□□ -0.8
SRRT-211ENST00000478693 AQP11Q8NBQ7 271 aa10.05□□□□□ -0.8
SRRT-211ENST00000478693 OR4C15Q8NGM1 316 aa10.05□□□□□ -0.8
SRRT-211ENST00000478693 LINC01560Q8TB33 94 aa10.05□□□□□ -0.8
SRRT-211ENST00000478693 ZNF566Q969W8 418 aa10.05□□□□□ -0.8
SRRT-211ENST00000478693 TXNDC15Q96J42 360 aa10.05□□□□□ -0.8
SRRT-211ENST00000478693 TNFRSF13CQ96RJ3 184 aa10.05□□□□□ -0.8
SRRT-211ENST00000478693 SPOCK3Q9BQ16 436 aa10.05□□□□□ -0.8
SRRT-211ENST00000478693 FUZQ9BT04 418 aa10.05□□□□□ -0.8
SRRT-211ENST00000478693 HDHD5Q9BXW7 423 aa10.05□□□□□ -0.8
SRRT-211ENST00000478693 ULBP2Q9BZM5 246 aa10.05□□□□□ -0.8
SRRT-211ENST00000478693 ENKD1Q9H0I2 346 aa10.05□□□□□ -0.8
SRRT-211ENST00000478693 TAS2R16Q9NYV7 291 aa10.05□□□□□ -0.8
SRRT-211ENST00000478693 KIF17Q9P2E2 1029 aa10.05□□□□□ -0.8
SRRT-211ENST00000478693 STX18Q9P2W9 335 aaKnown RBP10.05□□□□□ -0.8
SRRT-211ENST00000478693 DNAJB9Q9UBS3 223 aa10.05□□□□□ -0.8
SRRT-211ENST00000478693 MALT1Q9UDY8 824 aa10.05□□□□□ -0.8
SRRT-211ENST00000478693 GPR52Q9Y2T5 361 aa10.05□□□□□ -0.8
SRRT-211ENST00000478693 DOCK7Q96N67 2140 aa10.04□□□□□ -0.8
SRRT-211ENST00000478693 HNRNPRO43390 633 aaKnown RBP10.04□□□□□ -0.8
SRRT-211ENST00000478693 UPK3AO75631 287 aa10.04□□□□□ -0.8
SRRT-211ENST00000478693 FCGR1AP12314 374 aa10.04□□□□□ -0.8
SRRT-211ENST00000478693 PPP3CBP16298 524 aa10.04□□□□□ -0.8
SRRT-211ENST00000478693 PSMB1P20618 241 aaKnown RBP10.04□□□□□ -0.8
SRRT-211ENST00000478693 FASP25445 335 aa10.04□□□□□ -0.8
SRRT-211ENST00000478693 LIMS1P48059 325 aa10.04□□□□□ -0.8
SRRT-211ENST00000478693 IST1P53990 364 aa10.04□□□□□ -0.8
SRRT-211ENST00000478693 RPS4XP62701 263 aaKnown RBP10.04□□□□□ -0.8
SRRT-211ENST00000478693 ROR2Q01974 943 aaKnown RBP10.04□□□□□ -0.8
SRRT-211ENST00000478693 TGFBR3Q03167 851 aa10.04□□□□□ -0.8
SRRT-211ENST00000478693 ACKR1Q16570 336 aa10.04□□□□□ -0.8
SRRT-211ENST00000478693 MICAQ29983 383 aa10.04□□□□□ -0.8
SRRT-211ENST00000478693 SFRP5Q5T4F7 317 aa10.04□□□□□ -0.8
SRRT-211ENST00000478693 ZNF787Q6DD87 383 aa10.04□□□□□ -0.8
SRRT-211ENST00000478693 SMARCD3Q6STE5 483 aa10.04□□□□□ -0.8
SRRT-211ENST00000478693 KLHL24Q6TFL4 600 aa10.04□□□□□ -0.8
SRRT-211ENST00000478693 ZER1Q7Z7L7 766 aa10.04□□□□□ -0.8
SRRT-211ENST00000478693 PAPD5Q8NDF8 572 aaKnown RBP10.04□□□□□ -0.8
SRRT-211ENST00000478693 NOXO1Q8NFA2 376 aa10.04□□□□□ -0.8
SRRT-211ENST00000478693 OR52L1Q8NGH7 329 aa10.04□□□□□ -0.8
SRRT-211ENST00000478693 OR6X1Q8NH79 312 aa10.04□□□□□ -0.8
SRRT-211ENST00000478693 GIPC3Q8TF64 312 aa10.04□□□□□ -0.8
SRRT-211ENST00000478693 PYDC1Q8WXC3 89 aa10.04□□□□□ -0.8
SRRT-211ENST00000478693 GTPBP3Q969Y2 492 aaKnown RBP10.04□□□□□ -0.8
SRRT-211ENST00000478693 MARVELD3Q96A59 401 aa10.04□□□□□ -0.8
SRRT-211ENST00000478693 SLCO4A1Q96BD0 722 aa10.04□□□□□ -0.8
SRRT-211ENST00000478693 S100PBPQ96BU1 408 aa10.04□□□□□ -0.8
SRRT-211ENST00000478693 ZNF570Q96NI8 536 aa10.04□□□□□ -0.8
SRRT-211ENST00000478693 KATNB1Q9BVA0 655 aa10.04□□□□□ -0.8
SRRT-211ENST00000478693 LINC00470Q9BZP3 86 aa10.04□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms