RNA–Protein interactions for RNA: ENST00000478582.5

CCM2-211, Transcript of CCM2 scaffold protein, humanhuman

TSL 3

Gene CCM2, Length 937 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-211ENST00000478582 SNTB1Q13884 538 aaKnown RBP23.65■■□□□ 1.38
CCM2-211ENST00000478582 GK3PQ14409 553 aa23.65■■□□□ 1.38
CCM2-211ENST00000478582 STAC2Q6ZMT1 411 aa23.65■■□□□ 1.38
CCM2-211ENST00000478582 POMGNT2Q8NAT1 580 aa23.65■■□□□ 1.38
CCM2-211ENST00000478582 HDHD5Q9BXW7 423 aa23.65■■□□□ 1.38
CCM2-211ENST00000478582 C11orf98E9PRG8 122 aa23.64■■□□□ 1.37
CCM2-211ENST00000478582 TNFRSF11BO00300 401 aa23.64■■□□□ 1.37
CCM2-211ENST00000478582 CDC42EP2O14613 210 aa23.64■■□□□ 1.37
CCM2-211ENST00000478582 KLF4O43474 513 aa23.64■■□□□ 1.37
CCM2-211ENST00000478582 RNF13O43567 381 aa23.64■■□□□ 1.37
CCM2-211ENST00000478582 ADAP00813 363 aa23.64■■□□□ 1.37
CCM2-211ENST00000478582 AQP2P41181 271 aa23.64■■□□□ 1.37
CCM2-211ENST00000478582 SELENOPP49908 381 aa23.64■■□□□ 1.37
CCM2-211ENST00000478582 TSPO2Q5TGU0 170 aa23.64■■□□□ 1.37
CCM2-211ENST00000478582 NIPAL3Q6P499 406 aa23.64■■□□□ 1.37
CCM2-211ENST00000478582 OAFQ86UD1 273 aa23.64■■□□□ 1.37
CCM2-211ENST00000478582 LINC00471Q8N535 108 aa23.64■■□□□ 1.37
CCM2-211ENST00000478582 SLCO4A1Q96BD0 722 aa23.64■■□□□ 1.37
CCM2-211ENST00000478582 DUS3LQ96G46 650 aaKnown RBP23.64■■□□□ 1.37
CCM2-211ENST00000478582 LINC00470Q9BZP3 86 aa23.64■■□□□ 1.37
CCM2-211ENST00000478582 OR10A4Q9H209 315 aa23.64■■□□□ 1.37
CCM2-211ENST00000478582 SLCO5A1Q9H2Y9 848 aa23.64■■□□□ 1.37
CCM2-211ENST00000478582 SLC7A10Q9NS82 523 aa23.64■■□□□ 1.37
CCM2-211ENST00000478582 GPR52Q9Y2T5 361 aa23.64■■□□□ 1.37
CCM2-211ENST00000478582 PDZD2O15018 2839 aa23.64■■□□□ 1.37
CCM2-211ENST00000478582 FKBP6O75344 327 aa23.63■■□□□ 1.37
CCM2-211ENST00000478582 COX5AP20674 150 aa23.63■■□□□ 1.37
CCM2-211ENST00000478582 GPR4P46093 362 aa23.63■■□□□ 1.37
CCM2-211ENST00000478582 ITGADQ13349 1161 aa23.63■■□□□ 1.37
CCM2-211ENST00000478582 CCNIQ14094 377 aa23.63■■□□□ 1.37
CCM2-211ENST00000478582 SFRP5Q5T4F7 317 aa23.63■■□□□ 1.37
CCM2-211ENST00000478582 ZER1Q7Z7L7 766 aa23.63■■□□□ 1.37
CCM2-211ENST00000478582 CXorf67Q86X51 503 aaPredicted RBP23.63■■□□□ 1.37
CCM2-211ENST00000478582 MEX3DQ86XN8 651 aaKnown RBP23.63■■□□□ 1.37
CCM2-211ENST00000478582 UBE2J2Q8N2K1 259 aa23.63■■□□□ 1.37
CCM2-211ENST00000478582 FAM46AQ96IP4 442 aaKnown RBP23.63■■□□□ 1.37
CCM2-211ENST00000478582 RSRC1Q96IZ7 334 aaKnown RBP23.63■■□□□ 1.37
CCM2-211ENST00000478582 TXNDC15Q96J42 360 aa23.63■■□□□ 1.37
CCM2-211ENST00000478582 OR2M2Q96R28 347 aa23.63■■□□□ 1.37
CCM2-211ENST00000478582 REEP1Q9H902 201 aa23.63■■□□□ 1.37
CCM2-211ENST00000478582 ASB6Q9NWX5 421 aa23.63■■□□□ 1.37
CCM2-211ENST00000478582 PDLIM1O00151 329 aa23.62■■□□□ 1.37
CCM2-211ENST00000478582 CST1P01037 141 aa23.62■■□□□ 1.37
CCM2-211ENST00000478582 IGHV3-9P01782 118 aa23.62■■□□□ 1.37
CCM2-211ENST00000478582 CCKARP32238 428 aa23.62■■□□□ 1.37
CCM2-211ENST00000478582 IFNGR2P38484 337 aa23.62■■□□□ 1.37
CCM2-211ENST00000478582 LAPTM4AQ15012 233 aa23.62■■□□□ 1.37
CCM2-211ENST00000478582 C1orf94Q6P1W5 598 aa23.62■■□□□ 1.37
CCM2-211ENST00000478582 SLC35D2Q76EJ3 337 aa23.62■■□□□ 1.37
CCM2-211ENST00000478582 TMEM123Q8N131 208 aa23.62■■□□□ 1.37
CCM2-211ENST00000478582 MOSPD2Q8NHP6 518 aa23.62■■□□□ 1.37
CCM2-211ENST00000478582 ADAD1Q96M93 576 aaKnown RBP23.62■■□□□ 1.37
CCM2-211ENST00000478582 TNFRSF13CQ96RJ3 184 aa23.62■■□□□ 1.37
CCM2-211ENST00000478582 INIPQ9NRY2 104 aa23.62■■□□□ 1.37
CCM2-211ENST00000478582 MED29Q9NX70 200 aa23.62■■□□□ 1.37
CCM2-211ENST00000478582 VNN3Q9NY84 501 aa23.62■■□□□ 1.37
CCM2-211ENST00000478582 CRIM1Q9NZV1 1036 aa23.62■■□□□ 1.37
CCM2-211ENST00000478582 UPB1Q9UBR1 384 aa23.62■■□□□ 1.37
CCM2-211ENST00000478582 MYO9AB2RTY4 2548 aa23.62■■□□□ 1.37
CCM2-211ENST00000478582 SLC35F4A4IF30 521 aa23.61■■□□□ 1.37
CCM2-211ENST00000478582 TUBAL3A6NHL2 446 aa23.61■■□□□ 1.37
CCM2-211ENST00000478582 NPIPB13A6NJU9 1138 aa23.61■■□□□ 1.37
CCM2-211ENST00000478582 NPIPB4C9JG80 1138 aa23.61■■□□□ 1.37
CCM2-211ENST00000478582 OR10H3O60404 316 aa23.61■■□□□ 1.37
CCM2-211ENST00000478582 PTP4A3O75365 173 aa23.61■■□□□ 1.37
CCM2-211ENST00000478582 SLC43A1O75387 559 aa23.61■■□□□ 1.37
CCM2-211ENST00000478582 IFNGR1P15260 489 aa23.61■■□□□ 1.37
CCM2-211ENST00000478582 IGHV1-2P23083 117 aa23.61■■□□□ 1.37
CCM2-211ENST00000478582 ERFP50548 548 aa23.61■■□□□ 1.37
CCM2-211ENST00000478582 PRPS1P60891 318 aa23.61■■□□□ 1.37
CCM2-211ENST00000478582 ZBED5Q49AG3 693 aa23.61■■□□□ 1.37
CCM2-211ENST00000478582 LRRC75AQ8NAA5 344 aa23.61■■□□□ 1.37
CCM2-211ENST00000478582 OR13C2Q8NGS9 318 aa23.61■■□□□ 1.37
CCM2-211ENST00000478582 OR51A7Q8NH64 312 aa23.61■■□□□ 1.37
CCM2-211ENST00000478582 OR6X1Q8NH79 312 aa23.61■■□□□ 1.37
CCM2-211ENST00000478582 LRR1Q96L50 414 aa23.61■■□□□ 1.37
CCM2-211ENST00000478582 SAMHD1Q9Y3Z3 626 aaKnown RBP23.61■■□□□ 1.37
CCM2-211ENST00000478582 FREM1Q5H8C1 2179 aa23.6■■□□□ 1.37
CCM2-211ENST00000478582 TRAV27A0A087WT01 109 aa23.6■■□□□ 1.37
CCM2-211ENST00000478582 ZNF726A6NNF4 738 aa23.6■■□□□ 1.37
CCM2-211ENST00000478582 F13BP05160 661 aa23.6■■□□□ 1.37
CCM2-211ENST00000478582 PPP3CBP16298 524 aa23.6■■□□□ 1.37
CCM2-211ENST00000478582 FAPQ12884 760 aa23.6■■□□□ 1.37
CCM2-211ENST00000478582 ALG10Q5BKT4 473 aa23.6■■□□□ 1.37
CCM2-211ENST00000478582 ABHD12BQ7Z5M8 362 aaPredicted RBP23.6■■□□□ 1.37
CCM2-211ENST00000478582 STEAP2Q8NFT2 490 aa23.6■■□□□ 1.37
CCM2-211ENST00000478582 FAM222BQ8WU58 562 aa23.6■■□□□ 1.37
CCM2-211ENST00000478582 GPA33Q99795 319 aa23.6■■□□□ 1.37
CCM2-211ENST00000478582 USB1Q9BQ65 265 aaKnown RBP23.6■■□□□ 1.37
CCM2-211ENST00000478582 EMC6Q9BV81 110 aa23.6■■□□□ 1.37
CCM2-211ENST00000478582 ARMC1Q9NVT9 282 aa23.6■■□□□ 1.37
CCM2-211ENST00000478582 NDRG3Q9UGV2 375 aa23.6■■□□□ 1.37
CCM2-211ENST00000478582 SIGLEC7Q9Y286 467 aa23.6■■□□□ 1.37
CCM2-211ENST00000478582 A0A1W2PRG6 482 aa23.59■■□□□ 1.37
CCM2-211ENST00000478582 CLOCKO15516 846 aa23.59■■□□□ 1.37
CCM2-211ENST00000478582 SERPINI2O75830 405 aa23.59■■□□□ 1.37
CCM2-211ENST00000478582 CCNB2O95067 398 aa23.59■■□□□ 1.37
CCM2-211ENST00000478582 FPR3P25089 353 aa23.59■■□□□ 1.37
CCM2-211ENST00000478582 BIDP55957 195 aa23.59■■□□□ 1.37
CCM2-211ENST00000478582 TAF11Q15544 211 aa23.59■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms