RNA–Protein interactions for RNA: ENST00000477626.5

PRPF39-203, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 2

Gene PRPF39, Length 3,507 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-203ENST00000477626 TRAPPC4Q9Y296 219 aa10.87□□□□□ -0.67
PRPF39-203ENST00000477626 A0A087WV48 116 aa10.86□□□□□ -0.67
PRPF39-203ENST00000477626 A0A0G2JK05 382 aa10.86□□□□□ -0.67
PRPF39-203ENST00000477626 SPAARA0A1B0GVQ0 90 aa10.86□□□□□ -0.67
PRPF39-203ENST00000477626 SLC22A23A1A5C7 686 aa10.86□□□□□ -0.67
PRPF39-203ENST00000477626 CEACAM4O75871 244 aa10.86□□□□□ -0.67
PRPF39-203ENST00000477626 TNFSF15O95150 251 aa10.86□□□□□ -0.67
PRPF39-203ENST00000477626 GYPBP06028 91 aa10.86□□□□□ -0.67
PRPF39-203ENST00000477626 ICAM2P13598 275 aa10.86□□□□□ -0.67
PRPF39-203ENST00000477626 BMP7P18075 431 aa10.86□□□□□ -0.67
PRPF39-203ENST00000477626 ACER2Q5QJU3 275 aa10.86□□□□□ -0.67
PRPF39-203ENST00000477626 GPR139Q6DWJ6 353 aa10.86□□□□□ -0.67
PRPF39-203ENST00000477626 TUBA3EQ6PEY2 450 aa10.86□□□□□ -0.67
PRPF39-203ENST00000477626 UNQ9370/PRO34162Q6UXP9 181 aa10.86□□□□□ -0.67
PRPF39-203ENST00000477626 CCDC81Q6ZN84 652 aa10.86□□□□□ -0.67
PRPF39-203ENST00000477626 OR6Q1Q8NGQ2 317 aa10.86□□□□□ -0.67
PRPF39-203ENST00000477626 ZNF417Q8TAU3 575 aa10.86□□□□□ -0.67
PRPF39-203ENST00000477626 ZNF587Q96SQ5 575 aaPredicted RBP10.86□□□□□ -0.67
PRPF39-203ENST00000477626 SDHCQ99643 169 aaPredicted RBP10.86□□□□□ -0.67
PRPF39-203ENST00000477626 SOSTQ9BQB4 213 aa10.86□□□□□ -0.67
PRPF39-203ENST00000477626 KLHL1Q9NR64 748 aa10.86□□□□□ -0.67
PRPF39-203ENST00000477626 TXNL4BQ9NX01 149 aaKnown RBP10.86□□□□□ -0.67
PRPF39-203ENST00000477626 PLEKHB1Q9UF11 243 aaPredicted RBP10.86□□□□□ -0.67
PRPF39-203ENST00000477626 TRDV1A0A1B0GX56 115 aa10.86□□□□□ -0.67
PRPF39-203ENST00000477626 STMND1H3BQB6 276 aa10.86□□□□□ -0.67
PRPF39-203ENST00000477626 RAMP1O60894 148 aa10.86□□□□□ -0.67
PRPF39-203ENST00000477626 WNT11O96014 354 aa10.86□□□□□ -0.67
PRPF39-203ENST00000477626 F13BP05160 661 aa10.86□□□□□ -0.67
PRPF39-203ENST00000477626 RFPL3SP0C7P2 107 aa10.86□□□□□ -0.67
PRPF39-203ENST00000477626 HPGDP15428 266 aa10.86□□□□□ -0.67
PRPF39-203ENST00000477626 RPL27P61353 136 aaKnown RBP10.86□□□□□ -0.67
PRPF39-203ENST00000477626 DCAF10Q5QP82 559 aa10.86□□□□□ -0.67
PRPF39-203ENST00000477626 FDX2Q6P4F2 183 aa10.86□□□□□ -0.67
PRPF39-203ENST00000477626 SGCZQ96LD1 299 aa10.86□□□□□ -0.67
PRPF39-203ENST00000477626 MOKQ9UQ07 419 aa10.86□□□□□ -0.67
PRPF39-203ENST00000477626 PRSS37A4D1T9 235 aa10.85□□□□□ -0.67
PRPF39-203ENST00000477626 CFPP27918 469 aa10.85□□□□□ -0.67
PRPF39-203ENST00000477626 DSCR4P56555 118 aaPredicted RBP10.85□□□□□ -0.67
PRPF39-203ENST00000477626 TUBA1BP68363 451 aa10.85□□□□□ -0.67
PRPF39-203ENST00000477626 ACKR1Q16570 336 aa10.85□□□□□ -0.67
PRPF39-203ENST00000477626 TEX30Q5JUR7 227 aa10.85□□□□□ -0.67
PRPF39-203ENST00000477626 TIGD3Q6B0B8 471 aa10.85□□□□□ -0.67
PRPF39-203ENST00000477626 TUBA1AQ71U36 451 aa10.85□□□□□ -0.67
PRPF39-203ENST00000477626 VASH1Q7L8A9 365 aaPredicted RBP10.85□□□□□ -0.67
PRPF39-203ENST00000477626 ADCK1Q86TW2 530 aa10.85□□□□□ -0.67
PRPF39-203ENST00000477626 BEST3Q8N1M1 668 aa10.85□□□□□ -0.67
PRPF39-203ENST00000477626 TMEM234Q8WY98 164 aa10.85□□□□□ -0.67
PRPF39-203ENST00000477626 PELI1Q96FA3 418 aa10.85□□□□□ -0.67
PRPF39-203ENST00000477626 SIGLEC12Q96PQ1 595 aa10.85□□□□□ -0.67
PRPF39-203ENST00000477626 ALG8Q9BVK2 526 aa10.85□□□□□ -0.67
PRPF39-203ENST00000477626 UGT2A1Q9Y4X1 527 aa10.85□□□□□ -0.67
PRPF39-203ENST00000477626 ZFHX2Q9C0A1 2572 aaPredicted RBP10.85□□□□□ -0.67
PRPF39-203ENST00000477626 AQP7P3A6NL99 342 aa10.85□□□□□ -0.67
PRPF39-203ENST00000477626 RIIAD1A6NNX1 92 aa10.85□□□□□ -0.67
PRPF39-203ENST00000477626 C12orf71A8MTZ7 269 aa10.85□□□□□ -0.67
PRPF39-203ENST00000477626 SELENOFO60613 162 aa10.85□□□□□ -0.67
PRPF39-203ENST00000477626 ZNF432O94892 652 aa10.85□□□□□ -0.67
PRPF39-203ENST00000477626 OR2T7P0C7T2 308 aa10.85□□□□□ -0.67
PRPF39-203ENST00000477626 NTF4P34130 210 aa10.85□□□□□ -0.67
PRPF39-203ENST00000477626 HCCSP53701 268 aa10.85□□□□□ -0.67
PRPF39-203ENST00000477626 MAMDC2Q7Z304 686 aaPredicted RBP10.85□□□□□ -0.67
PRPF39-203ENST00000477626 BTLAQ7Z6A9 289 aa10.85□□□□□ -0.67
PRPF39-203ENST00000477626 TMCO5AQ8N6Q1 288 aa10.85□□□□□ -0.67
PRPF39-203ENST00000477626 TEX19Q8NA77 164 aa10.85□□□□□ -0.67
PRPF39-203ENST00000477626 OR9Q1Q8NGQ5 310 aa10.85□□□□□ -0.67
PRPF39-203ENST00000477626 OR2T27Q8NH04 317 aa10.85□□□□□ -0.67
PRPF39-203ENST00000477626 ZNF563Q8TA94 476 aa10.85□□□□□ -0.67
PRPF39-203ENST00000477626 RNF32Q9H0A6 362 aa10.85□□□□□ -0.67
PRPF39-203ENST00000477626 OCEL1Q9H607 264 aa10.85□□□□□ -0.67
PRPF39-203ENST00000477626 VCX3AQ9NNX9 186 aa10.85□□□□□ -0.67
PRPF39-203ENST00000477626 AIREO43918 545 aa10.85□□□□□ -0.67
PRPF39-203ENST00000477626 SNX4O95219 450 aa10.85□□□□□ -0.67
PRPF39-203ENST00000477626 PGA4P0DJD7 388 aa10.85□□□□□ -0.67
PRPF39-203ENST00000477626 PGA3P0DJD8 388 aa10.85□□□□□ -0.67
PRPF39-203ENST00000477626 CEACAM1P13688 526 aa10.85□□□□□ -0.67
PRPF39-203ENST00000477626 CXCR1P25024 350 aa10.85□□□□□ -0.67
PRPF39-203ENST00000477626 THBS2P35442 1172 aa10.85□□□□□ -0.67
PRPF39-203ENST00000477626 RPS19P39019 145 aaKnown RBP10.85□□□□□ -0.67
PRPF39-203ENST00000477626 IFITM3Q01628 133 aa10.85□□□□□ -0.67
PRPF39-203ENST00000477626 SRSF6Q13247 344 aaKnown RBP10.85□□□□□ -0.67
PRPF39-203ENST00000477626 INSL4Q14641 139 aa10.85□□□□□ -0.67
PRPF39-203ENST00000477626 MOGQ16653 247 aa10.85□□□□□ -0.67
PRPF39-203ENST00000477626 CEP78Q5JTW2 689 aa10.85□□□□□ -0.67
PRPF39-203ENST00000477626 TRILQ7L0X0 811 aa10.85□□□□□ -0.67
PRPF39-203ENST00000477626 ACBD7Q8N6N7 88 aa10.85□□□□□ -0.67
PRPF39-203ENST00000477626 ZIC4Q8N9L1 334 aa10.85□□□□□ -0.67
PRPF39-203ENST00000477626 OR51G2Q8NGK0 314 aa10.85□□□□□ -0.67
PRPF39-203ENST00000477626 TSSK2Q96PF2 358 aa10.85□□□□□ -0.67
PRPF39-203ENST00000477626 CHST11Q9NPF2 352 aa10.85□□□□□ -0.67
PRPF39-203ENST00000477626 PPP4R1LQ9P1A2 415 aa10.85□□□□□ -0.67
PRPF39-203ENST00000477626 ERGIC3Q9Y282 383 aa10.85□□□□□ -0.67
PRPF39-203ENST00000477626 EFSO43281 561 aa10.84□□□□□ -0.67
PRPF39-203ENST00000477626 AKR7A3O95154 331 aa10.84□□□□□ -0.67
PRPF39-203ENST00000477626 HPNP05981 417 aa10.84□□□□□ -0.67
PRPF39-203ENST00000477626 JMJD7P0C870 316 aa10.84□□□□□ -0.67
PRPF39-203ENST00000477626 BMXP51813 675 aa10.84□□□□□ -0.67
PRPF39-203ENST00000477626 CTXN1P60606 82 aa10.84□□□□□ -0.67
PRPF39-203ENST00000477626 KRR1Q13601 381 aaKnown RBP10.84□□□□□ -0.67
PRPF39-203ENST00000477626 TBC1D25Q3MII6 688 aa10.84□□□□□ -0.67
PRPF39-203ENST00000477626 SLC6A19Q695T7 634 aa10.84□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 106.2 ms