RNA–Protein interactions for RNA: ENST00000477528.5

HDAC6-220, Transcript of histone deacetylase 6, humanhuman

TSL 1 (best)

Gene HDAC6, Length 4,832 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-220ENST00000477528 NEDD4LQ96PU5 975 aa13.41□□□□□ -0.26
HDAC6-220ENST00000477528 LAT2Q9GZY6 243 aa13.41□□□□□ -0.26
HDAC6-220ENST00000477528 RPH3AQ9Y2J0 694 aaPredicted RBP13.41□□□□□ -0.26
HDAC6-220ENST00000477528 PTRH2Q9Y3E5 179 aaKnown RBP13.41□□□□□ -0.26
HDAC6-220ENST00000477528 LILRA5A6NI73 299 aa13.41□□□□□ -0.26
HDAC6-220ENST00000477528 GOSR2O14653 212 aa13.41□□□□□ -0.26
HDAC6-220ENST00000477528 MTRF1O75570 445 aaKnown RBP13.41□□□□□ -0.26
HDAC6-220ENST00000477528 LIMS3P0CW19 117 aa13.41□□□□□ -0.26
HDAC6-220ENST00000477528 LIMS4P0CW20 117 aa13.41□□□□□ -0.26
HDAC6-220ENST00000477528 RBMXP38159 391 aaKnown RBP13.41□□□□□ -0.26
HDAC6-220ENST00000477528 S100A10P60903 97 aa13.41□□□□□ -0.26
HDAC6-220ENST00000477528 BAK1Q16611 211 aa13.41□□□□□ -0.26
HDAC6-220ENST00000477528 MEP1BQ16820 701 aa13.41□□□□□ -0.26
HDAC6-220ENST00000477528 LRRC61Q9BV99 259 aa13.41□□□□□ -0.26
HDAC6-220ENST00000477528 LIN7BQ9HAP6 207 aa13.41□□□□□ -0.26
HDAC6-220ENST00000477528 SPEF1Q9Y4P9 236 aa13.41□□□□□ -0.26
HDAC6-220ENST00000477528 A0A0B4J2E0 115 aa13.41□□□□□ -0.26
HDAC6-220ENST00000477528 A0A1B0GX12 115 aa13.41□□□□□ -0.26
HDAC6-220ENST00000477528 DSCR3O14972 297 aa13.41□□□□□ -0.26
HDAC6-220ENST00000477528 ERGP11308 486 aa13.41□□□□□ -0.26
HDAC6-220ENST00000477528 KIR2DL1P43626 348 aaPredicted RBP13.41□□□□□ -0.26
HDAC6-220ENST00000477528 SPOCK1Q08629 439 aa13.41□□□□□ -0.26
HDAC6-220ENST00000477528 ARL6IP1Q15041 203 aa13.41□□□□□ -0.26
HDAC6-220ENST00000477528 OR6V1Q8N148 313 aa13.41□□□□□ -0.26
HDAC6-220ENST00000477528 GPR137CQ8N3F9 429 aa13.41□□□□□ -0.26
HDAC6-220ENST00000477528 SMIM19Q96E16 107 aa13.41□□□□□ -0.26
HDAC6-220ENST00000477528 FAM71F1Q96KD3 344 aaPredicted RBP13.41□□□□□ -0.26
HDAC6-220ENST00000477528 ZNF701Q9NV72 531 aaPredicted RBP13.41□□□□□ -0.26
HDAC6-220ENST00000477528 B4GALT7Q9UBV7 327 aa13.41□□□□□ -0.26
HDAC6-220ENST00000477528 MUTYHQ9UIF7 546 aa13.41□□□□□ -0.26
HDAC6-220ENST00000477528 SLC7A11Q9UPY5 501 aa13.41□□□□□ -0.26
HDAC6-220ENST00000477528 SIGLEC7Q9Y286 467 aa13.41□□□□□ -0.26
HDAC6-220ENST00000477528 SULT1B1O43704 296 aa13.41□□□□□ -0.26
HDAC6-220ENST00000477528 SLC22A5O76082 557 aa13.41□□□□□ -0.26
HDAC6-220ENST00000477528 FOSL2P15408 326 aa13.41□□□□□ -0.26
HDAC6-220ENST00000477528 HLA-DMAP28067 261 aa13.41□□□□□ -0.26
HDAC6-220ENST00000477528 LIPNQ5VXI9 398 aa13.41□□□□□ -0.26
HDAC6-220ENST00000477528 MORN4Q8NDC4 146 aa13.41□□□□□ -0.26
HDAC6-220ENST00000477528 SLC35B4Q969S0 331 aa13.41□□□□□ -0.26
HDAC6-220ENST00000477528 ELMOD3Q96FG2 381 aa13.41□□□□□ -0.26
HDAC6-220ENST00000477528 WDFY2Q96P53 400 aa13.41□□□□□ -0.26
HDAC6-220ENST00000477528 OR6C1Q96RD1 312 aa13.41□□□□□ -0.26
HDAC6-220ENST00000477528 RBM24Q9BX46 236 aaKnown RBP13.41□□□□□ -0.26
HDAC6-220ENST00000477528 GALNT9Q9HCQ5 603 aa13.41□□□□□ -0.26
HDAC6-220ENST00000477528 TRABD2BA6NFA1 517 aa13.4□□□□□ -0.26
HDAC6-220ENST00000477528 F5H5P2 479 aa13.4□□□□□ -0.26
HDAC6-220ENST00000477528 SEC14L5O43304 696 aa13.4□□□□□ -0.26
HDAC6-220ENST00000477528 SYNGR4O95473 234 aa13.4□□□□□ -0.26
HDAC6-220ENST00000477528 P2RX1P51575 399 aa13.4□□□□□ -0.26
HDAC6-220ENST00000477528 GFERP55789 205 aa13.4□□□□□ -0.26
HDAC6-220ENST00000477528 DLX5P56178 289 aa13.4□□□□□ -0.26
HDAC6-220ENST00000477528 CDK5R1Q15078 307 aa13.4□□□□□ -0.26
HDAC6-220ENST00000477528 PRICKLE4Q2TBC4 344 aa13.4□□□□□ -0.26
HDAC6-220ENST00000477528 OPN5Q6U736 354 aa13.4□□□□□ -0.26
HDAC6-220ENST00000477528 NAXEQ8NCW5 288 aa13.4□□□□□ -0.26
HDAC6-220ENST00000477528 FBLIM1Q8WUP2 373 aa13.4□□□□□ -0.26
HDAC6-220ENST00000477528 SNAPC3Q92966 411 aa13.4□□□□□ -0.26
HDAC6-220ENST00000477528 WSB2Q9NYS7 404 aaPredicted RBP13.4□□□□□ -0.26
HDAC6-220ENST00000477528 MEIS3P1A6NDR6 274 aa13.4□□□□□ -0.26
HDAC6-220ENST00000477528 TRIM64A6NGJ6 449 aa13.4□□□□□ -0.26
HDAC6-220ENST00000477528 FOLR3P41439 243 aa13.4□□□□□ -0.26
HDAC6-220ENST00000477528 TAS2R19P59542 299 aa13.4□□□□□ -0.26
HDAC6-220ENST00000477528 RPS15P62841 145 aaKnown RBP13.4□□□□□ -0.26
HDAC6-220ENST00000477528 GPR176Q14439 515 aa13.4□□□□□ -0.26
HDAC6-220ENST00000477528 RAB12Q6IQ22 244 aa13.4□□□□□ -0.26
HDAC6-220ENST00000477528 PRSS41Q7RTY9 318 aa13.4□□□□□ -0.26
HDAC6-220ENST00000477528 TDHQ8IZJ6 230 aa13.4□□□□□ -0.26
HDAC6-220ENST00000477528 EID2Q8N6I1 236 aa13.4□□□□□ -0.26
HDAC6-220ENST00000477528 CCNOP22674 350 aa13.4□□□□□ -0.26
HDAC6-220ENST00000477528 OTX2P32243 289 aa13.4□□□□□ -0.26
HDAC6-220ENST00000477528 RPL27P61353 136 aaKnown RBP13.4□□□□□ -0.26
HDAC6-220ENST00000477528 IRF3Q14653 427 aa13.4□□□□□ -0.26
HDAC6-220ENST00000477528 RNLSQ5VYX0 342 aa13.4□□□□□ -0.26
HDAC6-220ENST00000477528 GPR155Q7Z3F1 870 aa13.4□□□□□ -0.26
HDAC6-220ENST00000477528 RABEPKQ7Z6M1 372 aa13.4□□□□□ -0.26
HDAC6-220ENST00000477528 KIF18BQ86Y91 864 aa13.4□□□□□ -0.26
HDAC6-220ENST00000477528 LILRB4Q8NHJ6 448 aa13.4□□□□□ -0.26
HDAC6-220ENST00000477528 ATF6BQ99941 703 aa13.4□□□□□ -0.26
HDAC6-220ENST00000477528 FKBP14Q9NWM8 211 aa13.4□□□□□ -0.26
HDAC6-220ENST00000477528 MRPS2Q9Y399 296 aaKnown RBP13.4□□□□□ -0.26
HDAC6-220ENST00000477528 B4DXG7 233 aa13.39□□□□□ -0.27
HDAC6-220ENST00000477528 MPIG6BO95866 241 aa13.39□□□□□ -0.27
HDAC6-220ENST00000477528 PET100P0DJ07 73 aa13.39□□□□□ -0.27
HDAC6-220ENST00000477528 MEF2DQ14814 521 aa13.39□□□□□ -0.27
HDAC6-220ENST00000477528 NKPD1Q17RQ9 610 aa13.39□□□□□ -0.27
HDAC6-220ENST00000477528 PTCRAQ6ISU1 281 aaPredicted RBP13.39□□□□□ -0.27
HDAC6-220ENST00000477528 TMEM92Q6UXU6 159 aa13.39□□□□□ -0.27
HDAC6-220ENST00000477528 FOXRED2Q8IWF2 684 aa13.39□□□□□ -0.27
HDAC6-220ENST00000477528 OR4N2Q8NGD1 307 aa13.39□□□□□ -0.27
HDAC6-220ENST00000477528 OR14L1PQ8NHC6 308 aa13.39□□□□□ -0.27
HDAC6-220ENST00000477528 TSLPQ969D9 159 aa13.39□□□□□ -0.27
HDAC6-220ENST00000477528 SORCS2Q96PQ0 1159 aa13.39□□□□□ -0.27
HDAC6-220ENST00000477528 FKRPQ9H9S5 495 aa13.39□□□□□ -0.27
HDAC6-220ENST00000477528 ZNF160Q9HCG1 818 aa13.39□□□□□ -0.27
HDAC6-220ENST00000477528 GSKIPQ9P0R6 139 aa13.39□□□□□ -0.27
HDAC6-220ENST00000477528 TSPAN4O14817 238 aa13.39□□□□□ -0.27
HDAC6-220ENST00000477528 CSNK1A1P48729 337 aa13.39□□□□□ -0.27
HDAC6-220ENST00000477528 RAB2AP61019 212 aa13.39□□□□□ -0.27
HDAC6-220ENST00000477528 SYT13Q7L8C5 426 aa13.39□□□□□ -0.27
HDAC6-220ENST00000477528 NLGN4YQ8NFZ3 816 aaPredicted RBP13.39□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms