RNA–Protein interactions for RNA: ENST00000477446.5

EPHB4-204, Transcript of EPH receptor B4, humanhuman

TSL 1 (best)

Gene EPHB4, Length 1,551 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB4-204ENST00000477446 NCS1P62166 190 aa15.15■□□□□ 0.02
EPHB4-204ENST00000477446 LSM11P83369 360 aaKnown RBP eCLIP15.15■□□□□ 0.02
EPHB4-204ENST00000477446 SPHARQ15513 63 aa15.15■□□□□ 0.02
EPHB4-204ENST00000477446 TMPRSS11FQ6ZWK6 438 aa15.15■□□□□ 0.02
EPHB4-204ENST00000477446 OR2T33Q8NG76 320 aa15.15■□□□□ 0.02
EPHB4-204ENST00000477446 OR9Q1Q8NGQ5 310 aa15.15■□□□□ 0.02
EPHB4-204ENST00000477446 NDNFQ8TB73 568 aa15.15■□□□□ 0.02
EPHB4-204ENST00000477446 TMEM255BQ8WV15 326 aa15.15■□□□□ 0.02
EPHB4-204ENST00000477446 SARAFQ96BY9 339 aa15.15■□□□□ 0.02
EPHB4-204ENST00000477446 PLEKHA8Q96JA3 519 aa15.15■□□□□ 0.02
EPHB4-204ENST00000477446 PLA2G12AQ9BZM1 189 aa15.15■□□□□ 0.02
EPHB4-204ENST00000477446 DCSTAMPQ9H295 470 aa15.15■□□□□ 0.02
EPHB4-204ENST00000477446 MMP27Q9H306 513 aa15.15■□□□□ 0.02
EPHB4-204ENST00000477446 TMEM185BQ9H7F4 350 aa15.15■□□□□ 0.02
EPHB4-204ENST00000477446 SIAEQ9HAT2 523 aa15.15■□□□□ 0.02
EPHB4-204ENST00000477446 ISYNA1Q9NPH2 558 aa15.15■□□□□ 0.02
EPHB4-204ENST00000477446 MED31Q9Y3C7 131 aa15.15■□□□□ 0.02
EPHB4-204ENST00000477446 TMED7-TICAM2A0A0A6YYA0 188 aa15.14■□□□□ 0.01
EPHB4-204ENST00000477446 A0A0B4J2E0 115 aa15.14■□□□□ 0.01
EPHB4-204ENST00000477446 A0A1B0GX12 115 aa15.14■□□□□ 0.01
EPHB4-204ENST00000477446 UNC119BA6NIH7 251 aa15.14■□□□□ 0.01
EPHB4-204ENST00000477446 LYPD3O95274 346 aa15.14■□□□□ 0.01
EPHB4-204ENST00000477446 OPN1LWP04000 364 aa15.14■□□□□ 0.01
EPHB4-204ENST00000477446 PEPDP12955 493 aa15.14■□□□□ 0.01
EPHB4-204ENST00000477446 MYL12AP19105 171 aa15.14■□□□□ 0.01
EPHB4-204ENST00000477446 POU3F2P20265 443 aaPredicted RBP15.14■□□□□ 0.01
EPHB4-204ENST00000477446 GADD45AP24522 165 aa15.14■□□□□ 0.01
EPHB4-204ENST00000477446 CTBP2P56545 445 aa15.14■□□□□ 0.01
EPHB4-204ENST00000477446 LSM3P62310 102 aaKnown RBP15.14■□□□□ 0.01
EPHB4-204ENST00000477446 RAC1P63000 192 aa15.14■□□□□ 0.01
EPHB4-204ENST00000477446 IGFBP7Q16270 282 aa15.14■□□□□ 0.01
EPHB4-204ENST00000477446 ULK3Q6PHR2 472 aa15.14■□□□□ 0.01
EPHB4-204ENST00000477446 ATG4DQ86TL0 474 aaPredicted RBP15.14■□□□□ 0.01
EPHB4-204ENST00000477446 ANKK1Q8NFD2 765 aa15.14■□□□□ 0.01
EPHB4-204ENST00000477446 OR8D4Q8NGM9 314 aa15.14■□□□□ 0.01
EPHB4-204ENST00000477446 DNAJA4Q8WW22 397 aaPredicted RBP15.14■□□□□ 0.01
EPHB4-204ENST00000477446 SMPDL3BQ92485 455 aa15.14■□□□□ 0.01
EPHB4-204ENST00000477446 SERINC1Q9NRX5 453 aa15.14■□□□□ 0.01
EPHB4-204ENST00000477446 LSM2Q9Y333 95 aaKnown RBP15.14■□□□□ 0.01
EPHB4-204ENST00000477446 EXOSC1Q9Y3B2 195 aaKnown RBP15.14■□□□□ 0.01
EPHB4-204ENST00000477446 TMED7Q9Y3B3 224 aa15.14■□□□□ 0.01
EPHB4-204ENST00000477446 HTR3EA5X5Y0 456 aa15.13■□□□□ 0.01
EPHB4-204ENST00000477446 MYL12BO14950 172 aa15.13■□□□□ 0.01
EPHB4-204ENST00000477446 CHP2O43745 196 aa15.13■□□□□ 0.01
EPHB4-204ENST00000477446 HSMCR30P0CW71 290 aa15.13■□□□□ 0.01
EPHB4-204ENST00000477446 ZNF12P17014 697 aa15.13■□□□□ 0.01
EPHB4-204ENST00000477446 ZNF708P17019 499 aa15.13■□□□□ 0.01
EPHB4-204ENST00000477446 GRK5P34947 590 aa15.13■□□□□ 0.01
EPHB4-204ENST00000477446 CLDN18P56856 261 aa15.13■□□□□ 0.01
EPHB4-204ENST00000477446 C19orf57Q0VDD7 668 aa15.13■□□□□ 0.01
EPHB4-204ENST00000477446 MLLT11Q13015 90 aaPredicted RBP15.13■□□□□ 0.01
EPHB4-204ENST00000477446 SELENBP1Q13228 472 aa15.13■□□□□ 0.01
EPHB4-204ENST00000477446 C3AR1Q16581 482 aa15.13■□□□□ 0.01
EPHB4-204ENST00000477446 PGGHGQ32M88 737 aa15.13■□□□□ 0.01
EPHB4-204ENST00000477446 ALG10BQ5I7T1 473 aa15.13■□□□□ 0.01
EPHB4-204ENST00000477446 C3orf33Q6P1S2 294 aa15.13■□□□□ 0.01
EPHB4-204ENST00000477446 UBQLNLQ8IYU4 475 aa15.13■□□□□ 0.01
EPHB4-204ENST00000477446 ATP6V1C2Q8NEY4 427 aa15.13■□□□□ 0.01
EPHB4-204ENST00000477446 OR52L1Q8NGH7 329 aa15.13■□□□□ 0.01
EPHB4-204ENST00000477446 OR52I1Q8NGK6 324 aa15.13■□□□□ 0.01
EPHB4-204ENST00000477446 RELTQ969Z4 430 aa15.13■□□□□ 0.01
EPHB4-204ENST00000477446 WDYHV1Q96HA8 205 aa15.13■□□□□ 0.01
EPHB4-204ENST00000477446 TAPBPLQ9BX59 468 aa15.13■□□□□ 0.01
EPHB4-204ENST00000477446 FN3KQ9H479 309 aa15.13■□□□□ 0.01
EPHB4-204ENST00000477446 H2AFY2Q9P0M6 372 aaPredicted RBP15.13■□□□□ 0.01
EPHB4-204ENST00000477446 CHRNA9Q9UGM1 479 aa15.13■□□□□ 0.01
EPHB4-204ENST00000477446 TMEM129A0AVI4 362 aa15.12■□□□□ 0.01
EPHB4-204ENST00000477446 TMEM72A0PK05 275 aa15.12■□□□□ 0.01
EPHB4-204ENST00000477446 H0YC42 278 aa15.12■□□□□ 0.01
EPHB4-204ENST00000477446 SURF4O15260 269 aa15.12■□□□□ 0.01
EPHB4-204ENST00000477446 CPN1P15169 458 aa15.12■□□□□ 0.01
EPHB4-204ENST00000477446 ABOP16442 354 aa15.12■□□□□ 0.01
EPHB4-204ENST00000477446 CXCR1P25024 350 aa15.12■□□□□ 0.01
EPHB4-204ENST00000477446 SHC1P29353 583 aa15.12■□□□□ 0.01
EPHB4-204ENST00000477446 MTNR1AP48039 350 aa15.12■□□□□ 0.01
EPHB4-204ENST00000477446 SUCLG1P53597 346 aaKnown RBP15.12■□□□□ 0.01
EPHB4-204ENST00000477446 CLDN15P56746 228 aa15.12■□□□□ 0.01
EPHB4-204ENST00000477446 CLDN20P56880 219 aa15.12■□□□□ 0.01
EPHB4-204ENST00000477446 SRYQ05066 204 aa15.12■□□□□ 0.01
EPHB4-204ENST00000477446 MRPL49Q13405 166 aaKnown RBP15.12■□□□□ 0.01
EPHB4-204ENST00000477446 TMED1Q13445 227 aa15.12■□□□□ 0.01
EPHB4-204ENST00000477446 BCL2A1Q16548 175 aa15.12■□□□□ 0.01
EPHB4-204ENST00000477446 ZNF800Q2TB10 664 aaPredicted RBP eCLIP15.12■□□□□ 0.01
EPHB4-204ENST00000477446 C16orf87Q6PH81 154 aa15.12■□□□□ 0.01
EPHB4-204ENST00000477446 OR5M9Q8NGP3 310 aa15.12■□□□□ 0.01
EPHB4-204ENST00000477446 OR6Q1Q8NGQ2 317 aa15.12■□□□□ 0.01
EPHB4-204ENST00000477446 FAM57AQ8TBR7 257 aa15.12■□□□□ 0.01
EPHB4-204ENST00000477446 RNF217Q8TC41 542 aa15.12■□□□□ 0.01
EPHB4-204ENST00000477446 RPL3LQ92901 407 aaKnown RBP15.12■□□□□ 0.01
EPHB4-204ENST00000477446 OR5M11Q96RB7 305 aa15.12■□□□□ 0.01
EPHB4-204ENST00000477446 SLIRPQ9GZT3 109 aaKnown RBP15.12■□□□□ 0.01
EPHB4-204ENST00000477446 PRDM14Q9GZV8 571 aa15.12■□□□□ 0.01
EPHB4-204ENST00000477446 C12orf10Q9HB07 376 aa15.12■□□□□ 0.01
EPHB4-204ENST00000477446 CCDC59Q9P031 241 aaKnown RBP15.12■□□□□ 0.01
EPHB4-204ENST00000477446 SEC14L4Q9UDX3 406 aa15.12■□□□□ 0.01
EPHB4-204ENST00000477446 BAIAP2Q9UQB8 552 aa15.12■□□□□ 0.01
EPHB4-204ENST00000477446 ZNF835Q9Y2P0 537 aa15.12■□□□□ 0.01
EPHB4-204ENST00000477446 SEC14L5O43304 696 aa15.11■□□□□ 0.01
EPHB4-204ENST00000477446 SLC19A2O60779 497 aa15.11■□□□□ 0.01
EPHB4-204ENST00000477446 IFI30P13284 250 aa15.11■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms