RNA–Protein interactions for RNA: ENST00000476215.5

PTCD3-211, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 754 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-211ENST00000476215 RBKSQ9H477 322 aa3.25□□□□□ -1.89
PTCD3-211ENST00000476215 NEUROG3Q9Y4Z2 214 aa3.25□□□□□ -1.89
PTCD3-211ENST00000476215 DDX49Q9Y6V7 483 aaKnown RBP3.25□□□□□ -1.89
PTCD3-211ENST00000476215 RGPD3A6NKT7 1758 aaPredicted RBP3.25□□□□□ -1.89
PTCD3-211ENST00000476215 LTN1O94822 1766 aa3.25□□□□□ -1.89
PTCD3-211ENST00000476215 RGPD4Q7Z3J3 1758 aa3.25□□□□□ -1.89
PTCD3-211ENST00000476215 CASZ1Q86V15 1759 aa3.25□□□□□ -1.89
PTCD3-211ENST00000476215 PALLDQ8WX93 1383 aa3.25□□□□□ -1.89
PTCD3-211ENST00000476215 NHSQ6T4R5 1651 aa3.24□□□□□ -1.89
PTCD3-211ENST00000476215 BTAF1O14981 1849 aa3.24□□□□□ -1.89
PTCD3-211ENST00000476215 GJE1A6NN92 205 aa3.24□□□□□ -1.89
PTCD3-211ENST00000476215 ATP5LO75964 103 aa3.24□□□□□ -1.89
PTCD3-211ENST00000476215 DIRAS1O95057 198 aa3.24□□□□□ -1.89
PTCD3-211ENST00000476215 RPL13AP40429 203 aaKnown RBP3.24□□□□□ -1.89
PTCD3-211ENST00000476215 KPNA2P52292 529 aaKnown RBP3.24□□□□□ -1.89
PTCD3-211ENST00000476215 TAS2R19P59542 299 aa3.24□□□□□ -1.89
PTCD3-211ENST00000476215 UNC119Q13432 240 aa3.24□□□□□ -1.89
PTCD3-211ENST00000476215 PARP15Q460N3 678 aa3.24□□□□□ -1.89
PTCD3-211ENST00000476215 CCDC152Q4G0S7 254 aa3.24□□□□□ -1.89
PTCD3-211ENST00000476215 CASC10Q5T4H9 136 aa3.24□□□□□ -1.89
PTCD3-211ENST00000476215 GALNT17Q6IS24 598 aa3.24□□□□□ -1.89
PTCD3-211ENST00000476215 HSDL2Q6YN16 418 aa3.24□□□□□ -1.89
PTCD3-211ENST00000476215 VSTM4Q8IW00 320 aa3.24□□□□□ -1.89
PTCD3-211ENST00000476215 FAM71E2Q8N5Q1 922 aa3.24□□□□□ -1.89
PTCD3-211ENST00000476215 OR10G3Q8NGC4 313 aa3.24□□□□□ -1.89
PTCD3-211ENST00000476215 ZNF285Q96NJ3 590 aa3.24□□□□□ -1.89
PTCD3-211ENST00000476215 SECISBP2Q96T21 854 aaKnown RBP3.24□□□□□ -1.89
PTCD3-211ENST00000476215 P2RY13Q9BPV8 354 aa3.24□□□□□ -1.89
PTCD3-211ENST00000476215 ZSCAN5AQ9BUG6 496 aa3.24□□□□□ -1.89
PTCD3-211ENST00000476215 REEP4Q9H6H4 257 aa3.24□□□□□ -1.89
PTCD3-211ENST00000476215 ZNF331Q9NQX6 463 aaPredicted RBP3.24□□□□□ -1.89
PTCD3-211ENST00000476215 ZNF225Q9UK10 706 aa3.24□□□□□ -1.89
PTCD3-211ENST00000476215 POLDIP2Q9Y2S7 368 aa3.24□□□□□ -1.89
PTCD3-211ENST00000476215 RPL36Q9Y3U8 105 aaKnown RBP3.24□□□□□ -1.89
PTCD3-211ENST00000476215 CACNG2Q9Y698 323 aa3.24□□□□□ -1.89
PTCD3-211ENST00000476215 FAM208AQ9UK61 1670 aaKnown RBP3.24□□□□□ -1.89
PTCD3-211ENST00000476215 RGPD2P0DJD1 1756 aa3.23□□□□□ -1.89
PTCD3-211ENST00000476215 IGKV6D-21A0A0A0MT36 114 aa3.23□□□□□ -1.89
PTCD3-211ENST00000476215 CA11O75493 328 aa3.23□□□□□ -1.89
PTCD3-211ENST00000476215 SCGNO76038 276 aa3.23□□□□□ -1.89
PTCD3-211ENST00000476215 KLK3P07288 261 aaPredicted RBP3.23□□□□□ -1.89
PTCD3-211ENST00000476215 GIPP09681 153 aaPredicted RBP3.23□□□□□ -1.89
PTCD3-211ENST00000476215 PSG2P11465 335 aa3.23□□□□□ -1.89
PTCD3-211ENST00000476215 ZNF44P15621 663 aa3.23□□□□□ -1.89
PTCD3-211ENST00000476215 NPR2P20594 1047 aa3.23□□□□□ -1.89
PTCD3-211ENST00000476215 KIR2DS4P43632 304 aa3.23□□□□□ -1.89
PTCD3-211ENST00000476215 CASP4P49662 377 aa3.23□□□□□ -1.89
PTCD3-211ENST00000476215 EFNB2P52799 333 aa3.23□□□□□ -1.89
PTCD3-211ENST00000476215 C1QTNF8P60827 252 aa3.23□□□□□ -1.89
PTCD3-211ENST00000476215 ZNF763Q0D2J5 394 aa3.23□□□□□ -1.89
PTCD3-211ENST00000476215 ASPHQ12797 758 aa3.23□□□□□ -1.89
PTCD3-211ENST00000476215 DPYSL2Q16555 572 aa3.23□□□□□ -1.89
PTCD3-211ENST00000476215 NRF1Q16656 503 aa3.23□□□□□ -1.89
PTCD3-211ENST00000476215 OR2G6Q5TZ20 316 aa3.23□□□□□ -1.89
PTCD3-211ENST00000476215 OR52E8Q6IFG1 317 aa3.23□□□□□ -1.89
PTCD3-211ENST00000476215 Q6ZN92 141 aa3.23□□□□□ -1.89
PTCD3-211ENST00000476215 RFLNAQ6ZTI6 216 aa3.23□□□□□ -1.89
PTCD3-211ENST00000476215 PGAP1Q75T13 922 aa3.23□□□□□ -1.89
PTCD3-211ENST00000476215 SLC26A11Q86WA9 606 aa3.23□□□□□ -1.89
PTCD3-211ENST00000476215 ZNF540Q8NDQ6 660 aa3.23□□□□□ -1.89
PTCD3-211ENST00000476215 FANK1Q8TC84 345 aa3.23□□□□□ -1.89
PTCD3-211ENST00000476215 RNF2Q99496 336 aa3.23□□□□□ -1.89
PTCD3-211ENST00000476215 C20orf85Q9H1P6 137 aa3.23□□□□□ -1.89
PTCD3-211ENST00000476215 SMOXQ9NWM0 555 aa3.23□□□□□ -1.89
PTCD3-211ENST00000476215 SMPD3Q9NY59 655 aaPredicted RBP3.23□□□□□ -1.89
PTCD3-211ENST00000476215 HOXC10Q9NYD6 342 aa3.23□□□□□ -1.89
PTCD3-211ENST00000476215 PTBP2Q9UKA9 531 aaKnown RBP3.23□□□□□ -1.89
PTCD3-211ENST00000476215 WNK3Q9BYP7 1800 aa3.23□□□□□ -1.89
PTCD3-211ENST00000476215 PLEKHG2Q9H7P9 1386 aa3.23□□□□□ -1.89
PTCD3-211ENST00000476215 PAPPAQ13219 1627 aa3.22□□□□□ -1.89
PTCD3-211ENST00000476215 MAP2P11137 1827 aaKnown RBP3.22□□□□□ -1.89
PTCD3-211ENST00000476215 E9PBE3 544 aa3.22□□□□□ -1.89
PTCD3-211ENST00000476215 FAM189A1O60320 539 aa3.22□□□□□ -1.89
PTCD3-211ENST00000476215 PCMT1P22061 227 aa3.22□□□□□ -1.89
PTCD3-211ENST00000476215 CCNCP24863 283 aa3.22□□□□□ -1.89
PTCD3-211ENST00000476215 GNA11P29992 359 aa3.22□□□□□ -1.89
PTCD3-211ENST00000476215 VDAC2P45880 294 aaPredicted RBP3.22□□□□□ -1.89
PTCD3-211ENST00000476215 HLCSP50747 726 aa3.22□□□□□ -1.89
PTCD3-211ENST00000476215 GPM6AP51674 278 aa3.22□□□□□ -1.89
PTCD3-211ENST00000476215 UCNP55089 124 aa3.22□□□□□ -1.89
PTCD3-211ENST00000476215 SH3BGRP55822 239 aaPredicted RBP3.22□□□□□ -1.89
PTCD3-211ENST00000476215 SPIBQ01892 262 aa3.22□□□□□ -1.89
PTCD3-211ENST00000476215 SLC39A6Q13433 755 aa3.22□□□□□ -1.89
PTCD3-211ENST00000476215 MICBQ29980 383 aa3.22□□□□□ -1.89
PTCD3-211ENST00000476215 DMRTC1Q5HYR2 192 aa3.22□□□□□ -1.89
PTCD3-211ENST00000476215 C1orf220Q5T0J3 134 aa3.22□□□□□ -1.89
PTCD3-211ENST00000476215 TIFABQ6ZNK6 161 aa3.22□□□□□ -1.89
PTCD3-211ENST00000476215 KRTAP5-5Q701N2 237 aaPredicted RBP3.22□□□□□ -1.89
PTCD3-211ENST00000476215 NLRP9Q7RTR0 991 aa3.22□□□□□ -1.89
PTCD3-211ENST00000476215 PRSS41Q7RTY9 318 aa3.22□□□□□ -1.89
PTCD3-211ENST00000476215 RALGPS2Q86X27 583 aaPredicted RBP3.22□□□□□ -1.89
PTCD3-211ENST00000476215 ZNF433Q8N7K0 673 aaPredicted RBP3.22□□□□□ -1.89
PTCD3-211ENST00000476215 OR6C4Q8NGE1 309 aa3.22□□□□□ -1.89
PTCD3-211ENST00000476215 OR9G1Q8NH87 305 aa3.22□□□□□ -1.89
PTCD3-211ENST00000476215 ARPC1AQ92747 370 aa3.22□□□□□ -1.89
PTCD3-211ENST00000476215 CMTM7Q96FZ5 175 aa3.22□□□□□ -1.89
PTCD3-211ENST00000476215 NRIP2Q9BQI9 281 aa3.22□□□□□ -1.89
PTCD3-211ENST00000476215 MRPL45Q9BRJ2 306 aaKnown RBP3.22□□□□□ -1.89
PTCD3-211ENST00000476215 ACTR6Q9GZN1 396 aa3.22□□□□□ -1.89
PTCD3-211ENST00000476215 NHEJ1Q9H9Q4 299 aaPredicted RBP3.22□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms