RNA–Protein interactions for RNA: ENST00000475146.1

CPNE1-223, Transcript of copine 1, humanhuman

TSL 3

Gene CPNE1, Length 627 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-223ENST00000475146 CRLF2Q9HC73 371 aa21.03■□□□□ 0.96
CPNE1-223ENST00000475146 GPR35Q9HC97 309 aa21.03■□□□□ 0.96
CPNE1-223ENST00000475146 SPAG4Q9NPE6 437 aa21.03■□□□□ 0.96
CPNE1-223ENST00000475146 OBP2BQ9NPH6 170 aa21.03■□□□□ 0.96
CPNE1-223ENST00000475146 MEPEQ9NQ76 525 aaPredicted RBP21.03■□□□□ 0.96
CPNE1-223ENST00000475146 ADA2Q9NZK5 511 aa21.03■□□□□ 0.96
CPNE1-223ENST00000475146 ABCD2Q9UBJ2 740 aa21.03■□□□□ 0.96
CPNE1-223ENST00000475146 MED13LQ71F56 2210 aa21.02■□□□□ 0.96
CPNE1-223ENST00000475146 A0A096LPE4 126 aa21.02■□□□□ 0.96
CPNE1-223ENST00000475146 A0A1W2PPZ6 126 aa21.02■□□□□ 0.96
CPNE1-223ENST00000475146 SLC35F4A4IF30 521 aa21.02■□□□□ 0.96
CPNE1-223ENST00000475146 ZNF726A6NNF4 738 aa21.02■□□□□ 0.96
CPNE1-223ENST00000475146 M0R3G1 203 aa21.02■□□□□ 0.96
CPNE1-223ENST00000475146 THRBP10828 461 aa21.02■□□□□ 0.96
CPNE1-223ENST00000475146 NCK1P16333 377 aa21.02■□□□□ 0.96
CPNE1-223ENST00000475146 IFNA8P32881 189 aa21.02■□□□□ 0.96
CPNE1-223ENST00000475146 RPS4XP62701 263 aaKnown RBP21.02■□□□□ 0.96
CPNE1-223ENST00000475146 CEACAM16Q2WEN9 425 aa21.02■□□□□ 0.96
CPNE1-223ENST00000475146 C1QTNF12Q5T7M4 302 aa21.02■□□□□ 0.96
CPNE1-223ENST00000475146 ANKRD16Q6P6B7 361 aa21.02■□□□□ 0.96
CPNE1-223ENST00000475146 NANOGNBQ7Z5D8 188 aa21.02■□□□□ 0.96
CPNE1-223ENST00000475146 PIGWQ7Z7B1 504 aa21.02■□□□□ 0.96
CPNE1-223ENST00000475146 SMAP2Q8WU79 429 aaPredicted RBP21.02■□□□□ 0.96
CPNE1-223ENST00000475146 TMEM239Q8WW34 195 aa21.02■□□□□ 0.96
CPNE1-223ENST00000475146 BCL2L2Q92843 193 aaPredicted RBP21.02■□□□□ 0.96
CPNE1-223ENST00000475146 CISD1Q9NZ45 108 aaKnown RBP21.02■□□□□ 0.96
CPNE1-223ENST00000475146 RPL36A-HNRNPH2H7BZ11 118 aa21.01■□□□□ 0.95
CPNE1-223ENST00000475146 RNF13O43567 381 aa21.01■□□□□ 0.95
CPNE1-223ENST00000475146 SERPINA1P01009 418 aa21.01■□□□□ 0.95
CPNE1-223ENST00000475146 MT-ND1P03886 318 aa21.01■□□□□ 0.95
CPNE1-223ENST00000475146 IFNW1P05000 195 aa21.01■□□□□ 0.95
CPNE1-223ENST00000475146 IFNGR1P15260 489 aa21.01■□□□□ 0.95
CPNE1-223ENST00000475146 YAP1P46937 504 aaKnown RBP21.01■□□□□ 0.95
CPNE1-223ENST00000475146 PTH2RP49190 550 aa21.01■□□□□ 0.95
CPNE1-223ENST00000475146 ARF1P84077 181 aaKnown RBP21.01■□□□□ 0.95
CPNE1-223ENST00000475146 CAMK2DQ13557 499 aa21.01■□□□□ 0.95
CPNE1-223ENST00000475146 IFI44LQ53G44 452 aa21.01■□□□□ 0.95
CPNE1-223ENST00000475146 FKBP9P1Q75LS8 142 aa21.01■□□□□ 0.95
CPNE1-223ENST00000475146 SLC46A3Q7Z3Q1 461 aa21.01■□□□□ 0.95
CPNE1-223ENST00000475146 KRTAP1-3Q8IUG1 177 aa21.01■□□□□ 0.95
CPNE1-223ENST00000475146 C20orf196Q8IYI0 205 aa21.01■□□□□ 0.95
CPNE1-223ENST00000475146 DEPDC4Q8N2C3 294 aa21.01■□□□□ 0.95
CPNE1-223ENST00000475146 ANKK1Q8NFD2 765 aa21.01■□□□□ 0.95
CPNE1-223ENST00000475146 OR6N1Q8NGY5 312 aa21.01■□□□□ 0.95
CPNE1-223ENST00000475146 IGFBPL1Q8WX77 278 aa21.01■□□□□ 0.95
CPNE1-223ENST00000475146 GEMIN6Q8WXD5 167 aaKnown RBP21.01■□□□□ 0.95
CPNE1-223ENST00000475146 SGTBQ96EQ0 304 aa21.01■□□□□ 0.95
CPNE1-223ENST00000475146 BOD1Q96IK1 185 aa21.01■□□□□ 0.95
CPNE1-223ENST00000475146 HSH2DQ96JZ2 352 aa21.01■□□□□ 0.95
CPNE1-223ENST00000475146 LRRC37BQ96QE4 947 aa21.01■□□□□ 0.95
CPNE1-223ENST00000475146 TMUB1Q9BVT8 246 aa21.01■□□□□ 0.95
CPNE1-223ENST00000475146 GSX2Q9BZM3 304 aa21.01■□□□□ 0.95
CPNE1-223ENST00000475146 B3GAT2Q9NPZ5 323 aa21.01■□□□□ 0.95
CPNE1-223ENST00000475146 MED31Q9Y3C7 131 aa21.01■□□□□ 0.95
CPNE1-223ENST00000475146 HIVEP1P15822 2718 aa21■□□□□ 0.95
CPNE1-223ENST00000475146 TMCC2O75069 709 aa21■□□□□ 0.95
CPNE1-223ENST00000475146 DCTN3O75935 186 aa21■□□□□ 0.95
CPNE1-223ENST00000475146 SOD3P08294 240 aa21■□□□□ 0.95
CPNE1-223ENST00000475146 ASAH2BP0C7U1 165 aa21■□□□□ 0.95
CPNE1-223ENST00000475146 BIDP55957 195 aa21■□□□□ 0.95
CPNE1-223ENST00000475146 TUBA1BP68363 451 aa21■□□□□ 0.95
CPNE1-223ENST00000475146 TUBA4AP68366 448 aa21■□□□□ 0.95
CPNE1-223ENST00000475146 ST3GAL3Q11203 375 aa21■□□□□ 0.95
CPNE1-223ENST00000475146 PHYHD1Q5SRE7 291 aa21■□□□□ 0.95
CPNE1-223ENST00000475146 TUBA1AQ71U36 451 aa21■□□□□ 0.95
CPNE1-223ENST00000475146 CBLL1Q75N03 491 aa21■□□□□ 0.95
CPNE1-223ENST00000475146 ZNF837Q96EG3 531 aaPredicted RBP21■□□□□ 0.95
CPNE1-223ENST00000475146 HS6ST2Q96MM7 605 aa21■□□□□ 0.95
CPNE1-223ENST00000475146 TAS2R5Q9NYW4 299 aa21■□□□□ 0.95
CPNE1-223ENST00000475146 A4GNTQ9UNA3 340 aa21■□□□□ 0.95
CPNE1-223ENST00000475146 ARID1AO14497 2285 aa20.99■□□□□ 0.95
CPNE1-223ENST00000475146 SEC14L2O76054 403 aa20.99■□□□□ 0.95
CPNE1-223ENST00000475146 OR7A10O76100 309 aa20.99■□□□□ 0.95
CPNE1-223ENST00000475146 DANCRP0C864 163 aa20.99■□□□□ 0.95
CPNE1-223ENST00000475146 ZP4Q12836 540 aa20.99■□□□□ 0.95
CPNE1-223ENST00000475146 NHLRC1Q6VVB1 395 aa20.99■□□□□ 0.95
CPNE1-223ENST00000475146 SLC35D2Q76EJ3 337 aa20.99■□□□□ 0.95
CPNE1-223ENST00000475146 RNF148Q8N7C7 305 aa20.99■□□□□ 0.95
CPNE1-223ENST00000475146 MAGEE2Q8TD90 523 aaPredicted RBP20.99■□□□□ 0.95
CPNE1-223ENST00000475146 GTPBP3Q969Y2 492 aaKnown RBP20.99■□□□□ 0.95
CPNE1-223ENST00000475146 FNDC11Q9BVV2 318 aa20.99■□□□□ 0.95
CPNE1-223ENST00000475146 ULBP2Q9BZM5 246 aa20.99■□□□□ 0.95
CPNE1-223ENST00000475146 NELFAQ9H3P2 528 aa20.99■□□□□ 0.95
CPNE1-223ENST00000475146 C20orf141Q9NUB4 165 aa20.99■□□□□ 0.95
CPNE1-223ENST00000475146 FAIMQ9NVQ4 179 aa20.99■□□□□ 0.95
CPNE1-223ENST00000475146 RHCGQ9UBD6 479 aa20.99■□□□□ 0.95
CPNE1-223ENST00000475146 EGFL7Q9UHF1 273 aa20.99■□□□□ 0.95
CPNE1-223ENST00000475146 TAGLN3Q9UI15 199 aa20.99■□□□□ 0.95
CPNE1-223ENST00000475146 SNX13Q9Y5W8 968 aa20.99■□□□□ 0.95
CPNE1-223ENST00000475146 TEP1Q99973 2627 aaKnown RBP20.99■□□□□ 0.95
CPNE1-223ENST00000475146 CELSR1Q9NYQ6 3014 aa20.99■□□□□ 0.95
CPNE1-223ENST00000475146 ARPC4-TTLL3A0A0A6YYG9 625 aa20.98■□□□□ 0.95
CPNE1-223ENST00000475146 BLOC1S5-TXNDC5H3BN57 136 aa20.98■□□□□ 0.95
CPNE1-223ENST00000475146 FUT1P19526 365 aa20.98■□□□□ 0.95
CPNE1-223ENST00000475146 CSNK1A1P48729 337 aa20.98■□□□□ 0.95
CPNE1-223ENST00000475146 MELKQ14680 651 aa20.98■□□□□ 0.95
CPNE1-223ENST00000475146 PGGHGQ32M88 737 aa20.98■□□□□ 0.95
CPNE1-223ENST00000475146 YTHDF3Q7Z739 585 aaKnown RBP20.98■□□□□ 0.95
CPNE1-223ENST00000475146 WDFY1Q8IWB7 410 aa20.98■□□□□ 0.95
CPNE1-223ENST00000475146 LRR1Q96L50 414 aa20.98■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 55.4 ms