RNA–Protein interactions for RNA: ENST00000474643.5

VARS-223, Transcript of valyl-tRNA synthetase, humanhuman

TSL 5

Gene VARS, Length 885 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-223ENST00000474643 C1QTNF6Q9BXI9 259 aa13.29□□□□□ -0.28
VARS-223ENST00000474643 SLCO5A1Q9H2Y9 848 aa13.29□□□□□ -0.28
VARS-223ENST00000474643 SLC7A7Q9UM01 511 aa13.29□□□□□ -0.28
VARS-223ENST00000474643 FLVCR1Q9Y5Y0 555 aa13.29□□□□□ -0.28
VARS-223ENST00000474643 HIVEP2P31629 2446 aa13.29□□□□□ -0.28
VARS-223ENST00000474643 SHISA9B4DS77 424 aa13.28□□□□□ -0.28
VARS-223ENST00000474643 OVOL3O00110 214 aa13.28□□□□□ -0.28
VARS-223ENST00000474643 GSC2O15499 205 aa13.28□□□□□ -0.28
VARS-223ENST00000474643 CHP2O43745 196 aa13.28□□□□□ -0.28
VARS-223ENST00000474643 RRP9O43818 475 aaKnown RBP13.28□□□□□ -0.28
VARS-223ENST00000474643 SSX4O60224 188 aa13.28□□□□□ -0.28
VARS-223ENST00000474643 NPIPB7O75200 414 aa13.28□□□□□ -0.28
VARS-223ENST00000474643 SERPINA1P01009 418 aa13.28□□□□□ -0.28
VARS-223ENST00000474643 NQO1P15559 274 aaKnown RBP13.28□□□□□ -0.28
VARS-223ENST00000474643 CD40P25942 277 aa13.28□□□□□ -0.28
VARS-223ENST00000474643 EGR4Q05215 589 aa13.28□□□□□ -0.28
VARS-223ENST00000474643 PGGHGQ32M88 737 aa13.28□□□□□ -0.28
VARS-223ENST00000474643 FAM69AQ5T7M9 428 aa13.28□□□□□ -0.28
VARS-223ENST00000474643 GLYATQ6IB77 296 aa13.28□□□□□ -0.28
VARS-223ENST00000474643 PGM2L1Q6PCE3 622 aa13.28□□□□□ -0.28
VARS-223ENST00000474643 CLEC2AQ6UVW9 174 aa13.28□□□□□ -0.28
VARS-223ENST00000474643 MUC15Q8N387 334 aa13.28□□□□□ -0.28
VARS-223ENST00000474643 C17orf78Q8N4C9 275 aa13.28□□□□□ -0.28
VARS-223ENST00000474643 POMGNT2Q8NAT1 580 aa13.28□□□□□ -0.28
VARS-223ENST00000474643 C1orf162Q8NEQ5 155 aaPredicted RBP13.28□□□□□ -0.28
VARS-223ENST00000474643 OR9K2Q8NGE7 335 aa13.28□□□□□ -0.28
VARS-223ENST00000474643 SLC41A3Q96GZ6 507 aa13.28□□□□□ -0.28
VARS-223ENST00000474643 RHNO1Q9BSD3 238 aa13.28□□□□□ -0.28
VARS-223ENST00000474643 ASPNQ9BXN1 380 aa13.28□□□□□ -0.28
VARS-223ENST00000474643 CACNG6Q9BXT2 260 aa13.28□□□□□ -0.28
VARS-223ENST00000474643 REG4Q9BYZ8 158 aa13.28□□□□□ -0.28
VARS-223ENST00000474643 RPS6KA6Q9UK32 745 aa13.28□□□□□ -0.28
VARS-223ENST00000474643 SLC25A15Q9Y619 301 aa13.28□□□□□ -0.28
VARS-223ENST00000474643 AQP7P3A6NL99 342 aa13.27□□□□□ -0.29
VARS-223ENST00000474643 ZNF587BE7ETH6 402 aa13.27□□□□□ -0.29
VARS-223ENST00000474643 VAMP5O95183 116 aa13.27□□□□□ -0.29
VARS-223ENST00000474643 IFNW1P05000 195 aa13.27□□□□□ -0.29
VARS-223ENST00000474643 HOXB6P17509 224 aaKnown RBP13.27□□□□□ -0.29
VARS-223ENST00000474643 MPGP29372 298 aa13.27□□□□□ -0.29
VARS-223ENST00000474643 PRPS1P60891 318 aa13.27□□□□□ -0.29
VARS-223ENST00000474643 UBE2NP61088 152 aaKnown RBP13.27□□□□□ -0.29
VARS-223ENST00000474643 H3F3AP84243 136 aa13.27□□□□□ -0.29
VARS-223ENST00000474643 CHRNB3Q05901 458 aa13.27□□□□□ -0.29
VARS-223ENST00000474643 TRAP1Q12931 704 aaKnown RBP13.27□□□□□ -0.29
VARS-223ENST00000474643 SLC17A1Q14916 467 aa13.27□□□□□ -0.29
VARS-223ENST00000474643 MFSD13AQ14CX5 517 aa13.27□□□□□ -0.29
VARS-223ENST00000474643 RAB35Q15286 201 aa13.27□□□□□ -0.29
VARS-223ENST00000474643 GABRA6Q16445 453 aa13.27□□□□□ -0.29
VARS-223ENST00000474643 IFI44LQ53G44 452 aa13.27□□□□□ -0.29
VARS-223ENST00000474643 TSPO2Q5TGU0 170 aa13.27□□□□□ -0.29
VARS-223ENST00000474643 GEMIN6Q8WXD5 167 aaKnown RBP13.27□□□□□ -0.29
VARS-223ENST00000474643 TAAR8Q969N4 342 aa13.27□□□□□ -0.29
VARS-223ENST00000474643 MPP4Q96JB8 637 aa13.27□□□□□ -0.29
VARS-223ENST00000474643 DHRS9Q9BPW9 319 aa13.27□□□□□ -0.29
VARS-223ENST00000474643 TMEM43Q9BTV4 400 aa13.27□□□□□ -0.29
VARS-223ENST00000474643 PTDSS2Q9BVG9 487 aa13.27□□□□□ -0.29
VARS-223ENST00000474643 SF3B5Q9BWJ5 86 aaKnown RBP13.27□□□□□ -0.29
VARS-223ENST00000474643 GORASP2Q9H8Y8 452 aa13.27□□□□□ -0.29
VARS-223ENST00000474643 SLC7A10Q9NS82 523 aa13.27□□□□□ -0.29
VARS-223ENST00000474643 CBLN4Q9NTU7 201 aa13.27□□□□□ -0.29
VARS-223ENST00000474643 MAGEL2Q9UJ55 1249 aa13.27□□□□□ -0.29
VARS-223ENST00000474643 GDF2Q9UK05 429 aaPredicted RBP13.27□□□□□ -0.29
VARS-223ENST00000474643 RASD1Q9Y272 281 aa13.27□□□□□ -0.29
VARS-223ENST00000474643 IGKV1D-42A0A075B6H8 117 aa13.26□□□□□ -0.29
VARS-223ENST00000474643 KPNA4O00629 521 aaPredicted RBP13.26□□□□□ -0.29
VARS-223ENST00000474643 IGHV4-39P01824 125 aa13.26□□□□□ -0.29
VARS-223ENST00000474643 ITGA5P08648 1049 aa13.26□□□□□ -0.29
VARS-223ENST00000474643 GRPRP30550 384 aa13.26□□□□□ -0.29
VARS-223ENST00000474643 TTKP33981 857 aa13.26□□□□□ -0.29
VARS-223ENST00000474643 SPOCK1Q08629 439 aa13.26□□□□□ -0.29
VARS-223ENST00000474643 C1DQ13901 141 aaKnown RBP13.26□□□□□ -0.29
VARS-223ENST00000474643 TRIM25Q14258 630 aaKnown RBP13.26□□□□□ -0.29
VARS-223ENST00000474643 MTX3Q5HYI7 312 aa13.26□□□□□ -0.29
VARS-223ENST00000474643 SEZ6L2Q6UXD5 910 aa13.26□□□□□ -0.29
VARS-223ENST00000474643 CBLL1Q75N03 491 aa13.26□□□□□ -0.29
VARS-223ENST00000474643 VTCN1Q7Z7D3 282 aa13.26□□□□□ -0.29
VARS-223ENST00000474643 DTX2Q86UW9 622 aa13.26□□□□□ -0.29
VARS-223ENST00000474643 FAM156AQ8NDB6 213 aa13.26□□□□□ -0.29
VARS-223ENST00000474643 MCUR1Q96AQ8 359 aa13.26□□□□□ -0.29
VARS-223ENST00000474643 ASB9Q96DX5 294 aa13.26□□□□□ -0.29
VARS-223ENST00000474643 HSH2DQ96JZ2 352 aa13.26□□□□□ -0.29
VARS-223ENST00000474643 MUS81Q96NY9 551 aa13.26□□□□□ -0.29
VARS-223ENST00000474643 CADM1Q9BY67 442 aaKnown RBP13.26□□□□□ -0.29
VARS-223ENST00000474643 POLR2J2Q9GZM3 115 aaKnown RBP13.26□□□□□ -0.29
VARS-223ENST00000474643 PCDHAC1Q9H158 963 aa13.26□□□□□ -0.29
VARS-223ENST00000474643 POLR2J3Q9H1A7 115 aaKnown RBP13.26□□□□□ -0.29
VARS-223ENST00000474643 ACTR3BQ9P1U1 418 aa13.26□□□□□ -0.29
VARS-223ENST00000474643 RIMS3Q9UJD0 308 aa13.26□□□□□ -0.29
VARS-223ENST00000474643 TLN2Q9Y4G6 2542 aa13.26□□□□□ -0.29
VARS-223ENST00000474643 OR6C65A6NJZ3 312 aa13.25□□□□□ -0.29
VARS-223ENST00000474643 FTCDNL1E5RQL4 147 aa13.25□□□□□ -0.29
VARS-223ENST00000474643 E7EQL1 145 aa13.25□□□□□ -0.29
VARS-223ENST00000474643 M0R082 166 aa13.25□□□□□ -0.29
VARS-223ENST00000474643 NDUFS7O75251 213 aa13.25□□□□□ -0.29
VARS-223ENST00000474643 OR5F1O95221 314 aa13.25□□□□□ -0.29
VARS-223ENST00000474643 OR6A2O95222 327 aa13.25□□□□□ -0.29
VARS-223ENST00000474643 HIST1H2ABP04908 130 aa13.25□□□□□ -0.29
VARS-223ENST00000474643 UMPSP11172 480 aa13.25□□□□□ -0.29
VARS-223ENST00000474643 ZNF43P17038 809 aa13.25□□□□□ -0.29
VARS-223ENST00000474643 YAP1P46937 504 aaKnown RBP13.25□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms