RNA–Protein interactions for RNA: ENST00000473854.5

CCDC39-203, Transcript of coiled-coil domain containing 39, humanhuman

TSL 2

Gene CCDC39, Length 487 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-203ENST00000473854 P2RY2P41231 377 aa1.21□□□□□ -2.22
CCDC39-203ENST00000473854 CDKN2CP42773 168 aa1.21□□□□□ -2.22
CCDC39-203ENST00000473854 NSG1P42857 185 aa1.21□□□□□ -2.22
CCDC39-203ENST00000473854 SLC9A3P48764 834 aa1.21□□□□□ -2.22
CCDC39-203ENST00000473854 RGS4P49798 205 aa1.21□□□□□ -2.22
CCDC39-203ENST00000473854 GSK3BP49841 420 aa1.21□□□□□ -2.22
CCDC39-203ENST00000473854 CCR3P51677 355 aa1.21□□□□□ -2.22
CCDC39-203ENST00000473854 MNAT1P51948 309 aa1.21□□□□□ -2.22
CCDC39-203ENST00000473854 PPP5CP53041 499 aa1.21□□□□□ -2.22
CCDC39-203ENST00000473854 CRYBA2P53672 197 aa1.21□□□□□ -2.22
CCDC39-203ENST00000473854 OR4D2P58180 307 aa1.21□□□□□ -2.22
CCDC39-203ENST00000473854 MTPNP58546 118 aa1.21□□□□□ -2.22
CCDC39-203ENST00000473854 PFN3P60673 137 aa1.21□□□□□ -2.22
CCDC39-203ENST00000473854 PSME3P61289 254 aa1.21□□□□□ -2.22
CCDC39-203ENST00000473854 RPS14P62263 151 aaKnown RBP1.21□□□□□ -2.22
CCDC39-203ENST00000473854 TBPL1P62380 186 aa1.21□□□□□ -2.22
CCDC39-203ENST00000473854 ERVK-8P63133 956 aa1.21□□□□□ -2.22
CCDC39-203ENST00000473854 MAT1AQ00266 395 aaKnown RBP1.21□□□□□ -2.22
CCDC39-203ENST00000473854 REEP5Q00765 189 aa1.21□□□□□ -2.22
CCDC39-203ENST00000473854 DHODHQ02127 395 aa1.21□□□□□ -2.22
CCDC39-203ENST00000473854 TLE4Q04727 773 aa1.21□□□□□ -2.22
CCDC39-203ENST00000473854 SLC34A1Q06495 639 aa1.21□□□□□ -2.22
CCDC39-203ENST00000473854 RAD51Q06609 339 aa1.21□□□□□ -2.22
CCDC39-203ENST00000473854 ASPHQ12797 758 aa1.21□□□□□ -2.22
CCDC39-203ENST00000473854 CNTN1Q12860 1018 aa1.21□□□□□ -2.22
CCDC39-203ENST00000473854 HTR4Q13639 388 aa1.21□□□□□ -2.22
CCDC39-203ENST00000473854 APOFQ13790 326 aa1.21□□□□□ -2.22
CCDC39-203ENST00000473854 CYLC2Q14093 348 aaPredicted RBP1.21□□□□□ -2.22
CCDC39-203ENST00000473854 FLOT2Q14254 428 aa1.21□□□□□ -2.22
CCDC39-203ENST00000473854 GK3PQ14409 553 aa1.21□□□□□ -2.22
CCDC39-203ENST00000473854 NFE2L1Q14494 772 aa1.21□□□□□ -2.22
CCDC39-203ENST00000473854 DMC1Q14565 340 aa1.21□□□□□ -2.22
CCDC39-203ENST00000473854 ELAVL3Q14576 367 aaKnown RBP1.21□□□□□ -2.22
CCDC39-203ENST00000473854 IRF4Q15306 451 aa1.21□□□□□ -2.22
CCDC39-203ENST00000473854 TRIP10Q15642 601 aa1.21□□□□□ -2.22
CCDC39-203ENST00000473854 HNRNPA1L2Q32P51 320 aaKnown RBP1.21□□□□□ -2.22
CCDC39-203ENST00000473854 TTLL9Q3SXZ7 439 aa1.21□□□□□ -2.22
CCDC39-203ENST00000473854 GPR33Q49SQ1 333 aa1.21□□□□□ -2.22
CCDC39-203ENST00000473854 VPS26BQ4G0F5 336 aa1.21□□□□□ -2.22
CCDC39-203ENST00000473854 GGTA1PQ4G0N0 100 aa1.21□□□□□ -2.22
CCDC39-203ENST00000473854 BCL7AQ4VC05 210 aa1.21□□□□□ -2.22
CCDC39-203ENST00000473854 AGKQ53H12 422 aa1.21□□□□□ -2.22
CCDC39-203ENST00000473854 CMPK2Q5EBM0 449 aa1.21□□□□□ -2.22
CCDC39-203ENST00000473854 TMEM31Q5JXX7 168 aa1.21□□□□□ -2.22
CCDC39-203ENST00000473854 SPANXN4Q5MJ08 99 aa1.21□□□□□ -2.22
CCDC39-203ENST00000473854 C6orf136Q5SQH8 315 aa1.21□□□□□ -2.22
CCDC39-203ENST00000473854 C9orf64Q5T6V5 341 aa1.21□□□□□ -2.22
CCDC39-203ENST00000473854 OGFRL1Q5TC84 451 aaPredicted RBP1.21□□□□□ -2.22
CCDC39-203ENST00000473854 IL23RQ5VWK5 629 aa1.21□□□□□ -2.22
CCDC39-203ENST00000473854 PTRHD1Q6GMV3 140 aaKnown RBP1.21□□□□□ -2.22
CCDC39-203ENST00000473854 RAET1GQ6H3X3 334 aa1.21□□□□□ -2.22
CCDC39-203ENST00000473854 LCN8Q6JVE9 175 aa1.21□□□□□ -2.22
CCDC39-203ENST00000473854 ANKRD26P1Q6NSI1 321 aa1.21□□□□□ -2.22
CCDC39-203ENST00000473854 REG3GQ6UW15 175 aa1.21□□□□□ -2.22
CCDC39-203ENST00000473854 UGT2A3Q6UWM9 527 aa1.21□□□□□ -2.22
CCDC39-203ENST00000473854 ISLR2Q6UXK2 745 aa1.21□□□□□ -2.22
CCDC39-203ENST00000473854 IZUMO2Q6UXV1 221 aa1.21□□□□□ -2.22
CCDC39-203ENST00000473854 DLEU7Q6UYE1 221 aa1.21□□□□□ -2.22
CCDC39-203ENST00000473854 HACD2Q6Y1H2 254 aa1.21□□□□□ -2.22
CCDC39-203ENST00000473854 RNF165Q6ZSG1 346 aa1.21□□□□□ -2.22
CCDC39-203ENST00000473854 ERN2Q76MJ5 926 aaKnown RBP1.21□□□□□ -2.22
CCDC39-203ENST00000473854 TAS2R42Q7RTR8 314 aa1.21□□□□□ -2.22
CCDC39-203ENST00000473854 CAMKMTQ7Z624 323 aa1.21□□□□□ -2.22
CCDC39-203ENST00000473854 GALNT10Q86SR1 603 aa1.21□□□□□ -2.22
CCDC39-203ENST00000473854 ANKRD46Q86W74 232 aa1.21□□□□□ -2.22
CCDC39-203ENST00000473854 NUDT13Q86X67 352 aa1.21□□□□□ -2.22
CCDC39-203ENST00000473854 MMAAQ8IVH4 418 aaKnown RBP1.21□□□□□ -2.22
CCDC39-203ENST00000473854 SLC22A9Q8IVM8 553 aa1.21□□□□□ -2.22
CCDC39-203ENST00000473854 RIMKLAQ8IXN7 391 aa1.21□□□□□ -2.22
CCDC39-203ENST00000473854 SLC22A15Q8IZD6 547 aa1.21□□□□□ -2.22
CCDC39-203ENST00000473854 CLYBLQ8N0X4 340 aa1.21□□□□□ -2.22
CCDC39-203ENST00000473854 FBXW8Q8N3Y1 598 aa1.21□□□□□ -2.22
CCDC39-203ENST00000473854 KRTCAP2Q8N6L1 136 aa1.21□□□□□ -2.22
CCDC39-203ENST00000473854 FAM86B1Q8N7N1 296 aa1.21□□□□□ -2.22
CCDC39-203ENST00000473854 RASGEF1AQ8N9B8 481 aa1.21□□□□□ -2.22
CCDC39-203ENST00000473854 LINC01555Q8NAE3 123 aa1.21□□□□□ -2.22
CCDC39-203ENST00000473854 FNDC5Q8NAU1 212 aa1.21□□□□□ -2.22
CCDC39-203ENST00000473854 LEMD2Q8NC56 503 aa1.21□□□□□ -2.22
CCDC39-203ENST00000473854 SLC37A3Q8NCC5 494 aa1.21□□□□□ -2.22
CCDC39-203ENST00000473854 CSNK1G2-AS1Q8NCQ2 148 aa1.21□□□□□ -2.22
CCDC39-203ENST00000473854 OR5T2Q8NGG2 359 aa1.21□□□□□ -2.22
CCDC39-203ENST00000473854 OR56A4Q8NGH8 313 aa1.21□□□□□ -2.22
CCDC39-203ENST00000473854 STAG3L4Q8TBR4 150 aa1.21□□□□□ -2.22
CCDC39-203ENST00000473854 SLC13A3Q8WWT9 602 aa1.21□□□□□ -2.22
CCDC39-203ENST00000473854 DNAJC9Q8WXX5 260 aa1.21□□□□□ -2.22
CCDC39-203ENST00000473854 ELMO1Q92556 727 aa1.21□□□□□ -2.22
CCDC39-203ENST00000473854 N4BP2L2Q92802 583 aaPredicted RBP1.21□□□□□ -2.22
CCDC39-203ENST00000473854 KLK6Q92876 244 aa1.21□□□□□ -2.22
CCDC39-203ENST00000473854 SMARCD2Q92925 531 aa1.21□□□□□ -2.22
CCDC39-203ENST00000473854 GLYATL1Q969I3 302 aa1.21□□□□□ -2.22
CCDC39-203ENST00000473854 TBRG4Q969Z0 631 aaKnown RBP eCLIP1.21□□□□□ -2.22
CCDC39-203ENST00000473854 ATP6V1E2Q96A05 226 aa1.21□□□□□ -2.22
CCDC39-203ENST00000473854 MCUR1Q96AQ8 359 aa1.21□□□□□ -2.22
CCDC39-203ENST00000473854 VPS33AQ96AX1 596 aa1.21□□□□□ -2.22
CCDC39-203ENST00000473854 PYCR2Q96C36 320 aa1.21□□□□□ -2.22
CCDC39-203ENST00000473854 ULK4Q96C45 1275 aa1.21□□□□□ -2.22
CCDC39-203ENST00000473854 AP2M1Q96CW1 435 aa1.21□□□□□ -2.22
CCDC39-203ENST00000473854 TUBGCP3Q96CW5 907 aa1.21□□□□□ -2.22
CCDC39-203ENST00000473854 MRPL38Q96DV4 380 aaKnown RBP1.21□□□□□ -2.22
CCDC39-203ENST00000473854 ASB9Q96DX5 294 aa1.21□□□□□ -2.22
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms