RNA–Protein interactions for RNA: ENST00000473371.1

NHLRC3-204, Transcript of NHL repeat containing 3, humanhuman

TSL 2

Gene NHLRC3, Length 3,237 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NHLRC3-204ENST00000473371 TICRRQ7Z2Z1 1910 aa13□□□□□ -0.33
NHLRC3-204ENST00000473371 D6RAR5 112 aa13□□□□□ -0.33
NHLRC3-204ENST00000473371 ARPC3O15145 178 aa13□□□□□ -0.33
NHLRC3-204ENST00000473371 SDC3O75056 442 aa13□□□□□ -0.33
NHLRC3-204ENST00000473371 KDM4BO94953 1096 aa13□□□□□ -0.33
NHLRC3-204ENST00000473371 EGFP01133 1207 aa13□□□□□ -0.33
NHLRC3-204ENST00000473371 C5AR1P21730 350 aa13□□□□□ -0.33
NHLRC3-204ENST00000473371 FAM53BQ14153 422 aa13□□□□□ -0.33
NHLRC3-204ENST00000473371 UBXN2BQ14CS0 331 aa13□□□□□ -0.33
NHLRC3-204ENST00000473371 LIPNQ5VXI9 398 aa13□□□□□ -0.33
NHLRC3-204ENST00000473371 ZNF660Q6AZW8 331 aaPredicted RBP13□□□□□ -0.33
NHLRC3-204ENST00000473371 TSSK4Q6SA08 328 aa13□□□□□ -0.33
NHLRC3-204ENST00000473371 OR5M9Q8NGP3 310 aa13□□□□□ -0.33
NHLRC3-204ENST00000473371 OR8K3Q8NH51 312 aa13□□□□□ -0.33
NHLRC3-204ENST00000473371 SP7Q8TDD2 431 aaPredicted RBP13□□□□□ -0.33
NHLRC3-204ENST00000473371 RNF166Q96A37 237 aaPredicted RBP13□□□□□ -0.33
NHLRC3-204ENST00000473371 RSPH9Q9H1X1 276 aaPredicted RBP13□□□□□ -0.33
NHLRC3-204ENST00000473371 C4orf47A7E2U8 309 aa12.99□□□□□ -0.33
NHLRC3-204ENST00000473371 SLC31A1O15431 190 aa12.99□□□□□ -0.33
NHLRC3-204ENST00000473371 XRCC3O43542 346 aa12.99□□□□□ -0.33
NHLRC3-204ENST00000473371 OR10H2O60403 315 aa12.99□□□□□ -0.33
NHLRC3-204ENST00000473371 KAT7O95251 611 aa12.99□□□□□ -0.33
NHLRC3-204ENST00000473371 CBX7O95931 251 aa12.99□□□□□ -0.33
NHLRC3-204ENST00000473371 ADH1BP00325 375 aa12.99□□□□□ -0.33
NHLRC3-204ENST00000473371 IGKV1D-16P01601 117 aa12.99□□□□□ -0.33
NHLRC3-204ENST00000473371 APOC3P02656 99 aa12.99□□□□□ -0.33
NHLRC3-204ENST00000473371 CSF1P09603 554 aa12.99□□□□□ -0.33
NHLRC3-204ENST00000473371 GTF2F2P13984 249 aa12.99□□□□□ -0.33
NHLRC3-204ENST00000473371 SORDQ00796 357 aa12.99□□□□□ -0.33
NHLRC3-204ENST00000473371 ZNHIT3Q15649 155 aaPredicted RBP12.99□□□□□ -0.33
NHLRC3-204ENST00000473371 ZNF684Q5T5D7 378 aa12.99□□□□□ -0.33
NHLRC3-204ENST00000473371 LINC01590Q5TEZ4 76 aa12.99□□□□□ -0.33
NHLRC3-204ENST00000473371 FCRL6Q6DN72 434 aa12.99□□□□□ -0.33
NHLRC3-204ENST00000473371 LRRTM1Q86UE6 522 aa12.99□□□□□ -0.33
NHLRC3-204ENST00000473371 OR4D10Q8NGI6 311 aa12.99□□□□□ -0.33
NHLRC3-204ENST00000473371 SPPL3Q8TCT6 385 aa12.99□□□□□ -0.33
NHLRC3-204ENST00000473371 RERGQ96A58 199 aaPredicted RBP12.99□□□□□ -0.33
NHLRC3-204ENST00000473371 TSSK2Q96PF2 358 aa12.99□□□□□ -0.33
NHLRC3-204ENST00000473371 MFFQ9GZY8 342 aa12.99□□□□□ -0.33
NHLRC3-204ENST00000473371 CDV3Q9UKY7 258 aaKnown RBP12.99□□□□□ -0.33
NHLRC3-204ENST00000473371 ZNF337Q9Y3M9 751 aa12.99□□□□□ -0.33
NHLRC3-204ENST00000473371 A0A1B0GTH9 108 aa12.99□□□□□ -0.33
NHLRC3-204ENST00000473371 MEIS3P1A6NDR6 274 aa12.99□□□□□ -0.33
NHLRC3-204ENST00000473371 C4orf46Q504U0 113 aa12.99□□□□□ -0.33
NHLRC3-204ENST00000473371 YOD1Q5VVQ6 348 aaPredicted RBP12.99□□□□□ -0.33
NHLRC3-204ENST00000473371 DGAT2L6Q6ZPD8 337 aa12.99□□□□□ -0.33
NHLRC3-204ENST00000473371 KRT77Q7Z794 578 aa12.99□□□□□ -0.33
NHLRC3-204ENST00000473371 JAZF1Q86VZ6 243 aa12.99□□□□□ -0.33
NHLRC3-204ENST00000473371 TAS2R8Q9NYW2 309 aa12.99□□□□□ -0.33
NHLRC3-204ENST00000473371 FRRS1LQ9P0K9 344 aa12.99□□□□□ -0.33
NHLRC3-204ENST00000473371 PILRAQ9UKJ1 303 aa12.99□□□□□ -0.33
NHLRC3-204ENST00000473371 IKZF2Q9UKS7 526 aa12.99□□□□□ -0.33
NHLRC3-204ENST00000473371 KLHDC2Q9Y2U9 406 aa12.99□□□□□ -0.33
NHLRC3-204ENST00000473371 H0YGG7 62 aa12.98□□□□□ -0.33
NHLRC3-204ENST00000473371 CYR61O00622 381 aa12.98□□□□□ -0.33
NHLRC3-204ENST00000473371 IGF2P01344 180 aa12.98□□□□□ -0.33
NHLRC3-204ENST00000473371 ARF3P61204 181 aaPredicted RBP12.98□□□□□ -0.33
NHLRC3-204ENST00000473371 PSG6Q00889 435 aa12.98□□□□□ -0.33
NHLRC3-204ENST00000473371 KIR2DS3Q14952 304 aa12.98□□□□□ -0.33
NHLRC3-204ENST00000473371 SLC16A9Q7RTY1 509 aa12.98□□□□□ -0.33
NHLRC3-204ENST00000473371 OR51S1Q8NGJ8 323 aa12.98□□□□□ -0.33
NHLRC3-204ENST00000473371 FLVCR1-AS1Q8TAF5 88 aa12.98□□□□□ -0.33
NHLRC3-204ENST00000473371 EXOSC3Q9NQT5 275 aaKnown RBP12.98□□□□□ -0.33
NHLRC3-204ENST00000473371 MRM2Q9UI43 246 aaKnown RBP12.98□□□□□ -0.33
NHLRC3-204ENST00000473371 HRH3Q9Y5N1 445 aa12.98□□□□□ -0.33
NHLRC3-204ENST00000473371 PTPRSQ13332 1948 aa12.98□□□□□ -0.33
NHLRC3-204ENST00000473371 TRAV8-7A0A075B6U6 113 aa12.98□□□□□ -0.33
NHLRC3-204ENST00000473371 PRSS38A1L453 326 aa12.98□□□□□ -0.33
NHLRC3-204ENST00000473371 BLOC1S5-TXNDC5H3BN57 136 aa12.98□□□□□ -0.33
NHLRC3-204ENST00000473371 UPK3AO75631 287 aa12.98□□□□□ -0.33
NHLRC3-204ENST00000473371 AQP8O94778 261 aa12.98□□□□□ -0.33
NHLRC3-204ENST00000473371 CDKN2AP42771 156 aaKnown RBP12.98□□□□□ -0.33
NHLRC3-204ENST00000473371 HTRA4P83105 476 aaPredicted RBP12.98□□□□□ -0.33
NHLRC3-204ENST00000473371 GUCA2AQ02747 115 aa12.98□□□□□ -0.33
NHLRC3-204ENST00000473371 ODF4Q2M2E3 257 aa12.98□□□□□ -0.33
NHLRC3-204ENST00000473371 C2orf27AQ580R0 203 aa12.98□□□□□ -0.33
NHLRC3-204ENST00000473371 DNM1P46Q6ZS02 220 aa12.98□□□□□ -0.33
NHLRC3-204ENST00000473371 ZSCAN2Q7Z7L9 614 aaPredicted RBP12.98□□□□□ -0.33
NHLRC3-204ENST00000473371 C10orf53Q8N6V4 93 aa12.98□□□□□ -0.33
NHLRC3-204ENST00000473371 ZNF676Q8N7Q3 588 aa12.98□□□□□ -0.33
NHLRC3-204ENST00000473371 OR6N1Q8NGY5 312 aa12.98□□□□□ -0.33
NHLRC3-204ENST00000473371 ZNF296Q8WUU4 475 aaPredicted RBP12.98□□□□□ -0.33
NHLRC3-204ENST00000473371 EXO5Q9H790 373 aa12.98□□□□□ -0.33
NHLRC3-204ENST00000473371 IFT46Q9NQC8 304 aa12.98□□□□□ -0.33
NHLRC3-204ENST00000473371 A0A087WUJ7 227 aa12.98□□□□□ -0.33
NHLRC3-204ENST00000473371 H0YC42 278 aa12.98□□□□□ -0.33
NHLRC3-204ENST00000473371 FKTNO75072 461 aa12.98□□□□□ -0.33
NHLRC3-204ENST00000473371 CCL5P13501 91 aa12.98□□□□□ -0.33
NHLRC3-204ENST00000473371 RELL2Q8NC24 303 aaPredicted RBP12.98□□□□□ -0.33
NHLRC3-204ENST00000473371 CCDC74AQ96AQ1 378 aa12.98□□□□□ -0.33
NHLRC3-204ENST00000473371 CTHRC1Q96CG8 243 aa12.98□□□□□ -0.33
NHLRC3-204ENST00000473371 ASB16Q96NS5 453 aa12.98□□□□□ -0.33
NHLRC3-204ENST00000473371 ZFYVE21Q9BQ24 234 aa12.98□□□□□ -0.33
NHLRC3-204ENST00000473371 STEAP1Q9UHE8 339 aa12.98□□□□□ -0.33
NHLRC3-204ENST00000473371 TRAV18A0A075B6X5 111 aa12.97□□□□□ -0.33
NHLRC3-204ENST00000473371 TIMP1P01033 207 aa12.97□□□□□ -0.33
NHLRC3-204ENST00000473371 AKAIN1P0CW23 69 aa12.97□□□□□ -0.33
NHLRC3-204ENST00000473371 OR8S1Q8NH09 359 aa12.97□□□□□ -0.33
NHLRC3-204ENST00000473371 SRA1Q9HD15 236 aaKnown RBP12.97□□□□□ -0.33
NHLRC3-204ENST00000473371 TRBV5-5A0A0J9YX44 114 aa12.97□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms