RNA–Protein interactions for RNA: ENST00000472116.1

CDHR3-209, Transcript of cadherin related family member 3, humanhuman

TSL 2

Gene CDHR3, Length 993 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR3-209ENST00000472116 ACSS3Q9H6R3 686 aa8.6□□□□□ -1.03
CDHR3-209ENST00000472116 ZNF225Q9UK10 706 aa8.6□□□□□ -1.03
CDHR3-209ENST00000472116 TRIM33Q9UPN9 1127 aa8.6□□□□□ -1.03
CDHR3-209ENST00000472116 RCE1Q9Y256 329 aa8.6□□□□□ -1.03
CDHR3-209ENST00000472116 RASD1Q9Y272 281 aa8.6□□□□□ -1.03
CDHR3-209ENST00000472116 GPR45Q9Y5Y3 372 aa8.6□□□□□ -1.03
CDHR3-209ENST00000472116 RYR2Q92736 4967 aa8.59□□□□□ -1.03
CDHR3-209ENST00000472116 ZNF816-ZNF321PA0A0X1KG74 233 aa8.59□□□□□ -1.03
CDHR3-209ENST00000472116 LIPT2A6NK58 231 aa8.59□□□□□ -1.03
CDHR3-209ENST00000472116 E9PQ18 207 aa8.59□□□□□ -1.03
CDHR3-209ENST00000472116 SPRY3O43610 288 aa8.59□□□□□ -1.03
CDHR3-209ENST00000472116 UBL3O95164 117 aa8.59□□□□□ -1.03
CDHR3-209ENST00000472116 AK1P00568 194 aa8.59□□□□□ -1.03
CDHR3-209ENST00000472116 IGHV2-70P01814 119 aa8.59□□□□□ -1.03
CDHR3-209ENST00000472116 ENO1P06733 434 aaKnown RBP8.59□□□□□ -1.03
CDHR3-209ENST00000472116 ZNF43P17038 809 aa8.59□□□□□ -1.03
CDHR3-209ENST00000472116 GTF2E2P29084 291 aaKnown RBP8.59□□□□□ -1.03
CDHR3-209ENST00000472116 HSD17B3P37058 310 aa8.59□□□□□ -1.03
CDHR3-209ENST00000472116 GIPRP48546 466 aa8.59□□□□□ -1.03
CDHR3-209ENST00000472116 RAB1AP62820 205 aa8.59□□□□□ -1.03
CDHR3-209ENST00000472116 GLO1Q04760 184 aa8.59□□□□□ -1.03
CDHR3-209ENST00000472116 FAM219BQ5XKK7 198 aa8.59□□□□□ -1.03
CDHR3-209ENST00000472116 ZNF813Q6ZN06 617 aa8.59□□□□□ -1.03
CDHR3-209ENST00000472116 SNX32Q86XE0 403 aa8.59□□□□□ -1.03
CDHR3-209ENST00000472116 LRRC8AQ8IWT6 810 aa8.59□□□□□ -1.03
CDHR3-209ENST00000472116 RAB40AQ8WXH6 277 aa8.59□□□□□ -1.03
CDHR3-209ENST00000472116 SDF2Q99470 211 aa8.59□□□□□ -1.03
CDHR3-209ENST00000472116 SSBP3Q9BWW4 388 aaPredicted RBP8.59□□□□□ -1.03
CDHR3-209ENST00000472116 TRIM31Q9BZY9 425 aa8.59□□□□□ -1.03
CDHR3-209ENST00000472116 REEP4Q9H6H4 257 aa8.59□□□□□ -1.03
CDHR3-209ENST00000472116 CDH20Q9HBT6 801 aa8.59□□□□□ -1.03
CDHR3-209ENST00000472116 B3GNT2Q9NY97 397 aa8.59□□□□□ -1.03
CDHR3-209ENST00000472116 OSGIN1Q9UJX0 560 aa8.59□□□□□ -1.03
CDHR3-209ENST00000472116 JRKLQ9Y4A0 524 aa8.59□□□□□ -1.03
CDHR3-209ENST00000472116 U3KQK5 164 aa8.59□□□□□ -1.03
CDHR3-209ENST00000472116 IGHV2-70DA0A0C4DH43 119 aa8.58□□□□□ -1.04
CDHR3-209ENST00000472116 ZC3H12DA2A288 527 aaKnown RBP8.58□□□□□ -1.04
CDHR3-209ENST00000472116 DUXAA6NLW8 204 aa8.58□□□□□ -1.04
CDHR3-209ENST00000472116 RAD51CO43502 376 aa8.58□□□□□ -1.04
CDHR3-209ENST00000472116 AKAP10O43572 662 aa8.58□□□□□ -1.04
CDHR3-209ENST00000472116 UBOX5O94941 541 aa8.58□□□□□ -1.04
CDHR3-209ENST00000472116 UROSP10746 265 aa8.58□□□□□ -1.04
CDHR3-209ENST00000472116 ZNF250P15622 560 aa8.58□□□□□ -1.04
CDHR3-209ENST00000472116 CXCR1P25024 350 aa8.58□□□□□ -1.04
CDHR3-209ENST00000472116 TACR3P29371 465 aa8.58□□□□□ -1.04
CDHR3-209ENST00000472116 PGM1P36871 562 aa8.58□□□□□ -1.04
CDHR3-209ENST00000472116 CCT3P49368 545 aaKnown RBP8.58□□□□□ -1.04
CDHR3-209ENST00000472116 PCBP3P57721 371 aaKnown RBP8.58□□□□□ -1.04
CDHR3-209ENST00000472116 DR1Q01658 176 aa8.58□□□□□ -1.04
CDHR3-209ENST00000472116 GUCY2DQ02846 1103 aa8.58□□□□□ -1.04
CDHR3-209ENST00000472116 C1DQ13901 141 aaKnown RBP8.58□□□□□ -1.04
CDHR3-209ENST00000472116 UAP1Q16222 522 aaPredicted RBP8.58□□□□□ -1.04
CDHR3-209ENST00000472116 EMBQ6PCB8 327 aa8.58□□□□□ -1.04
CDHR3-209ENST00000472116 C6orf89Q6UWU4 347 aa8.58□□□□□ -1.04
CDHR3-209ENST00000472116 C16orf62Q7Z3J2 963 aa8.58□□□□□ -1.04
CDHR3-209ENST00000472116 EPHX4Q8IUS5 362 aa8.58□□□□□ -1.04
CDHR3-209ENST00000472116 POU5F2Q8N7G0 328 aa8.58□□□□□ -1.04
CDHR3-209ENST00000472116 C11orf44Q8N8P7 122 aa8.58□□□□□ -1.04
CDHR3-209ENST00000472116 OR4F17Q8NGA8 305 aa8.58□□□□□ -1.04
CDHR3-209ENST00000472116 ACTRT1Q8TDG2 376 aa8.58□□□□□ -1.04
CDHR3-209ENST00000472116 OIT3Q8WWZ8 545 aa8.58□□□□□ -1.04
CDHR3-209ENST00000472116 GATAD2BQ8WXI9 593 aa8.58□□□□□ -1.04
CDHR3-209ENST00000472116 MRRFQ96E11 262 aaKnown RBP8.58□□□□□ -1.04
CDHR3-209ENST00000472116 PLEKHA8Q96JA3 519 aa8.58□□□□□ -1.04
CDHR3-209ENST00000472116 EGLN2Q96KS0 407 aa8.58□□□□□ -1.04
CDHR3-209ENST00000472116 OR4F4Q96R69 305 aa8.58□□□□□ -1.04
CDHR3-209ENST00000472116 OR7D2Q96RA2 312 aa8.58□□□□□ -1.04
CDHR3-209ENST00000472116 C1QTNF3Q9BXJ4 246 aa8.58□□□□□ -1.04
CDHR3-209ENST00000472116 BCL2L14Q9BZR8 327 aa8.58□□□□□ -1.04
CDHR3-209ENST00000472116 TRIM15Q9C019 465 aa8.58□□□□□ -1.04
CDHR3-209ENST00000472116 TOR3AQ9H497 397 aa8.58□□□□□ -1.04
CDHR3-209ENST00000472116 B3GAT2Q9NPZ5 323 aa8.58□□□□□ -1.04
CDHR3-209ENST00000472116 RRAGDQ9NQL2 400 aaPredicted RBP8.58□□□□□ -1.04
CDHR3-209ENST00000472116 MKLN1Q9UL63 735 aa8.58□□□□□ -1.04
CDHR3-209ENST00000472116 POFUT2Q9Y2G5 429 aa8.58□□□□□ -1.04
CDHR3-209ENST00000472116 TIMM22Q9Y584 194 aa8.58□□□□□ -1.04
CDHR3-209ENST00000472116 KCNE3Q9Y6H6 103 aa8.58□□□□□ -1.04
CDHR3-209ENST00000472116 LCE6AA0A183 80 aa8.57□□□□□ -1.04
CDHR3-209ENST00000472116 SERTM1A2A2V5 107 aa8.57□□□□□ -1.04
CDHR3-209ENST00000472116 ANKRD61A6NGH8 418 aa8.57□□□□□ -1.04
CDHR3-209ENST00000472116 M0R3G1 203 aa8.57□□□□□ -1.04
CDHR3-209ENST00000472116 EIF3HO15372 352 aaKnown RBP eCLIP8.57□□□□□ -1.04
CDHR3-209ENST00000472116 SEC22BO75396 215 aa8.57□□□□□ -1.04
CDHR3-209ENST00000472116 CRCPO75575 148 aa8.57□□□□□ -1.04
CDHR3-209ENST00000472116 UGT2B17O75795 530 aa8.57□□□□□ -1.04
CDHR3-209ENST00000472116 TSPAN9O75954 239 aa8.57□□□□□ -1.04
CDHR3-209ENST00000472116 IGHV1-46P01743 117 aa8.57□□□□□ -1.04
CDHR3-209ENST00000472116 IGHV4-59P01825 116 aa8.57□□□□□ -1.04
CDHR3-209ENST00000472116 RPS2P15880 293 aaKnown RBP8.57□□□□□ -1.04
CDHR3-209ENST00000472116 CD33P20138 364 aa8.57□□□□□ -1.04
CDHR3-209ENST00000472116 EFNA1P20827 205 aaPredicted RBP8.57□□□□□ -1.04
CDHR3-209ENST00000472116 CRHR1P34998 444 aa8.57□□□□□ -1.04
CDHR3-209ENST00000472116 FRKP42685 505 aaPredicted RBP8.57□□□□□ -1.04
CDHR3-209ENST00000472116 ZNF75DP51815 510 aa8.57□□□□□ -1.04
CDHR3-209ENST00000472116 PKNOX1P55347 436 aa8.57□□□□□ -1.04
CDHR3-209ENST00000472116 BTG1P62324 171 aa8.57□□□□□ -1.04
CDHR3-209ENST00000472116 EMX1Q04741 257 aaPredicted RBP8.57□□□□□ -1.04
CDHR3-209ENST00000472116 RAB39AQ14964 217 aa8.57□□□□□ -1.04
CDHR3-209ENST00000472116 ZNF385BQ569K4 471 aa8.57□□□□□ -1.04
CDHR3-209ENST00000472116 DMRTC1Q5HYR2 192 aa8.57□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms