RNA–Protein interactions for RNA: ENST00000471978.5

C9orf3-213, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 2

Gene C9orf3, Length 478 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-213ENST00000471978 CAPZA2P47755 286 aa19.56■□□□□ 0.72
C9orf3-213ENST00000471978 IDH3GP51553 393 aaPredicted RBP19.56■□□□□ 0.72
C9orf3-213ENST00000471978 POU3F1Q03052 451 aaPredicted RBP19.56■□□□□ 0.72
C9orf3-213ENST00000471978 PMS2P3Q13401 168 aa19.56■□□□□ 0.72
C9orf3-213ENST00000471978 EFNB3Q15768 340 aa19.56■□□□□ 0.72
C9orf3-213ENST00000471978 PHYHD1Q5SRE7 291 aa19.56■□□□□ 0.72
C9orf3-213ENST00000471978 CYB5R2Q6BCY4 276 aa19.56■□□□□ 0.72
C9orf3-213ENST00000471978 PODNL1Q6PEZ8 512 aa19.56■□□□□ 0.72
C9orf3-213ENST00000471978 DHDDSQ86SQ9 333 aa19.56■□□□□ 0.72
C9orf3-213ENST00000471978 CCDC36Q8IYA8 594 aa19.56■□□□□ 0.72
C9orf3-213ENST00000471978 ANKS4BQ8N8V4 417 aa19.56■□□□□ 0.72
C9orf3-213ENST00000471978 C11orf65Q8NCR3 313 aa19.56■□□□□ 0.72
C9orf3-213ENST00000471978 NUP37Q8NFH4 326 aa19.56■□□□□ 0.72
C9orf3-213ENST00000471978 MOGAT1Q96PD6 335 aa19.56■□□□□ 0.72
C9orf3-213ENST00000471978 KCNK17Q96T54 332 aa19.56■□□□□ 0.72
C9orf3-213ENST00000471978 EMC6Q9BV81 110 aa19.56■□□□□ 0.72
C9orf3-213ENST00000471978 PLK3Q9H4B4 646 aa19.56■□□□□ 0.72
C9orf3-213ENST00000471978 NDUFAF1Q9Y375 327 aa19.56■□□□□ 0.72
C9orf3-213ENST00000471978 NDUFS8O00217 210 aa19.55■□□□□ 0.72
C9orf3-213ENST00000471978 SEC14L2O76054 403 aa19.55■□□□□ 0.72
C9orf3-213ENST00000471978 ARR3P36575 388 aa19.55■□□□□ 0.72
C9orf3-213ENST00000471978 LSM11P83369 360 aaKnown RBP eCLIP19.55■□□□□ 0.72
C9orf3-213ENST00000471978 HGFACQ04756 655 aa19.55■□□□□ 0.72
C9orf3-213ENST00000471978 NPRL3Q12980 569 aa19.55■□□□□ 0.72
C9orf3-213ENST00000471978 CARTPTQ16568 116 aa19.55■□□□□ 0.72
C9orf3-213ENST00000471978 CYP51A1Q16850 503 aa19.55■□□□□ 0.72
C9orf3-213ENST00000471978 SWT1Q5T5J6 900 aaKnown RBP19.55■□□□□ 0.72
C9orf3-213ENST00000471978 MDP1Q86V88 176 aa19.55■□□□□ 0.72
C9orf3-213ENST00000471978 PTOV1Q86YD1 416 aa19.55■□□□□ 0.72
C9orf3-213ENST00000471978 C20orf196Q8IYI0 205 aa19.55■□□□□ 0.72
C9orf3-213ENST00000471978 SPATA3Q8NHX4 192 aa19.55■□□□□ 0.72
C9orf3-213ENST00000471978 ANKRD27Q96NW4 1050 aa19.55■□□□□ 0.72
C9orf3-213ENST00000471978 PIMREGQ9BSJ6 248 aa19.55■□□□□ 0.72
C9orf3-213ENST00000471978 TMEM43Q9BTV4 400 aa19.55■□□□□ 0.72
C9orf3-213ENST00000471978 MRPL39Q9NYK5 338 aaKnown RBP19.55■□□□□ 0.72
C9orf3-213ENST00000471978 USP22Q9UPT9 525 aa19.55■□□□□ 0.72
C9orf3-213ENST00000471978 NOX1Q9Y5S8 564 aa19.55■□□□□ 0.72
C9orf3-213ENST00000471978 RTTNQ86VV8 2226 aa19.55■□□□□ 0.72
C9orf3-213ENST00000471978 FBN3Q75N90 2809 aa19.54■□□□□ 0.72
C9orf3-213ENST00000471978 IGHV2OR16-5A0A0B4J2B6 119 aa19.54■□□□□ 0.72
C9orf3-213ENST00000471978 SLC35F4A4IF30 521 aa19.54■□□□□ 0.72
C9orf3-213ENST00000471978 VWC2LB2RUY7 222 aa19.54■□□□□ 0.72
C9orf3-213ENST00000471978 LRRN3E7EW58 273 aa19.54■□□□□ 0.72
C9orf3-213ENST00000471978 M0R3H8 397 aa19.54■□□□□ 0.72
C9orf3-213ENST00000471978 ANGPT2O15123 496 aa19.54■□□□□ 0.72
C9orf3-213ENST00000471978 IGHV4-31P0DP07 118 aa19.54■□□□□ 0.72
C9orf3-213ENST00000471978 THBS4P35443 961 aa19.54■□□□□ 0.72
C9orf3-213ENST00000471978 PCBP3P57721 371 aaKnown RBP19.54■□□□□ 0.72
C9orf3-213ENST00000471978 MTPNP58546 118 aa19.54■□□□□ 0.72
C9orf3-213ENST00000471978 PUDPQ08623 228 aa19.54■□□□□ 0.72
C9orf3-213ENST00000471978 RBBP4Q09028 425 aa19.54■□□□□ 0.72
C9orf3-213ENST00000471978 SELPLGQ14242 412 aa19.54■□□□□ 0.72
C9orf3-213ENST00000471978 GGTLC2Q14390 218 aa19.54■□□□□ 0.72
C9orf3-213ENST00000471978 DPP10Q8N608 796 aa19.54■□□□□ 0.72
C9orf3-213ENST00000471978 CKAP2Q8WWK9 683 aa19.54■□□□□ 0.72
C9orf3-213ENST00000471978 STON2Q8WXE9 905 aa19.54■□□□□ 0.72
C9orf3-213ENST00000471978 TXNDC15Q96J42 360 aa19.54■□□□□ 0.72
C9orf3-213ENST00000471978 LRR1Q96L50 414 aa19.54■□□□□ 0.72
C9orf3-213ENST00000471978 MAGEB18Q96M61 343 aa19.54■□□□□ 0.72
C9orf3-213ENST00000471978 CGREF1Q99674 301 aa19.54■□□□□ 0.72
C9orf3-213ENST00000471978 MCHR1Q99705 422 aa19.54■□□□□ 0.72
C9orf3-213ENST00000471978 ARHGDIGQ99819 225 aa19.54■□□□□ 0.72
C9orf3-213ENST00000471978 B3GAT2Q9NPZ5 323 aa19.54■□□□□ 0.72
C9orf3-213ENST00000471978 MED29Q9NX70 200 aa19.54■□□□□ 0.72
C9orf3-213ENST00000471978 CDC42EP3Q9UKI2 254 aa19.54■□□□□ 0.72
C9orf3-213ENST00000471978 TRIM33Q9UPN9 1127 aa19.54■□□□□ 0.72
C9orf3-213ENST00000471978 YLPM1P49750 1951 aaKnown RBP19.53■□□□□ 0.72
C9orf3-213ENST00000471978 VSTM5A8MXK1 200 aa19.53■□□□□ 0.72
C9orf3-213ENST00000471978 HMGB1P1B2RPK0 211 aaPredicted RBP19.53■□□□□ 0.72
C9orf3-213ENST00000471978 M0QX08 132 aa19.53■□□□□ 0.72
C9orf3-213ENST00000471978 PLPP3O14495 311 aa19.53■□□□□ 0.72
C9orf3-213ENST00000471978 FMO6PO60774 539 aa19.53■□□□□ 0.72
C9orf3-213ENST00000471978 OPN1SWP03999 348 aa19.53■□□□□ 0.72
C9orf3-213ENST00000471978 NPR2P20594 1047 aa19.53■□□□□ 0.72
C9orf3-213ENST00000471978 AHCYP23526 432 aa19.53■□□□□ 0.72
C9orf3-213ENST00000471978 NR4A2P43354 598 aa19.53■□□□□ 0.72
C9orf3-213ENST00000471978 PPOXP50336 477 aa19.53■□□□□ 0.72
C9orf3-213ENST00000471978 DUSP7Q16829 419 aa19.53■□□□□ 0.72
C9orf3-213ENST00000471978 ZNF613Q6PF04 617 aa19.53■□□□□ 0.72
C9orf3-213ENST00000471978 NHLRC1Q6VVB1 395 aa19.53■□□□□ 0.72
C9orf3-213ENST00000471978 RETREG3Q86VR2 466 aa19.53■□□□□ 0.72
C9orf3-213ENST00000471978 ZNF385DQ9H6B1 395 aa19.53■□□□□ 0.72
C9orf3-213ENST00000471978 ZNF442Q9H7R0 627 aa19.53■□□□□ 0.72
C9orf3-213ENST00000471978 MYOZ1Q9NP98 299 aaPredicted RBP19.53■□□□□ 0.72
C9orf3-213ENST00000471978 FBXO9Q9UK97 447 aaPredicted RBP19.53■□□□□ 0.72
C9orf3-213ENST00000471978 SVEP1Q4LDE5 3571 aa19.53■□□□□ 0.72
C9orf3-213ENST00000471978 LOC390937A0A1W2PQ73 354 aa19.52■□□□□ 0.72
C9orf3-213ENST00000471978 ZNF726A6NNF4 738 aa19.52■□□□□ 0.72
C9orf3-213ENST00000471978 hCG_2039718K7EN88 272 aa19.52■□□□□ 0.72
C9orf3-213ENST00000471978 SERPINI2O75830 405 aa19.52■□□□□ 0.72
C9orf3-213ENST00000471978 C8BP07358 591 aa19.52■□□□□ 0.72
C9orf3-213ENST00000471978 ZNF16P17020 682 aaPredicted RBP19.52■□□□□ 0.72
C9orf3-213ENST00000471978 CAMK2DQ13557 499 aa19.52■□□□□ 0.72
C9orf3-213ENST00000471978 LINC00114Q6XXX2 140 aa19.52■□□□□ 0.72
C9orf3-213ENST00000471978 PXKQ7Z7A4 578 aa19.52■□□□□ 0.72
C9orf3-213ENST00000471978 WDFY1Q8IWB7 410 aa19.52■□□□□ 0.72
C9orf3-213ENST00000471978 IL17RDQ8NFM7 739 aa19.52■□□□□ 0.72
C9orf3-213ENST00000471978 GPR32P1Q8NGA4 272 aa19.52■□□□□ 0.72
C9orf3-213ENST00000471978 FOXN4Q96NZ1 517 aa19.52■□□□□ 0.72
C9orf3-213ENST00000471978 RAB1BQ9H0U4 201 aa19.52■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms