RNA–Protein interactions for RNA: ENST00000468949.1

HDAC6-216, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 572 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-216ENST00000468949 CLCF1Q9UBD9 225 aa7.25□□□□□ -1.25
HDAC6-216ENST00000468949 SEC14L4Q9UDX3 406 aa7.25□□□□□ -1.25
HDAC6-216ENST00000468949 IL20RAQ9UHF4 553 aa7.25□□□□□ -1.25
HDAC6-216ENST00000468949 TINAGQ9UJW2 476 aa7.25□□□□□ -1.25
HDAC6-216ENST00000468949 OSGIN2Q9Y236 505 aa7.25□□□□□ -1.25
HDAC6-216ENST00000468949 NOSIPQ9Y314 301 aaKnown RBP7.25□□□□□ -1.25
HDAC6-216ENST00000468949 NCKAP5O14513 1909 aa7.25□□□□□ -1.25
HDAC6-216ENST00000468949 SHANK1Q9Y566 2161 aa7.25□□□□□ -1.25
HDAC6-216ENST00000468949 MYO18BQ8IUG5 2567 aa7.24□□□□□ -1.25
HDAC6-216ENST00000468949 NBASA2RRP1 2371 aa7.24□□□□□ -1.25
HDAC6-216ENST00000468949 TEX13CA0A0J9YWL9 993 aa7.24□□□□□ -1.25
HDAC6-216ENST00000468949 CLEC18AA5D8T8 446 aa7.24□□□□□ -1.25
HDAC6-216ENST00000468949 A6NIZ1 184 aa7.24□□□□□ -1.25
HDAC6-216ENST00000468949 CD8B2A6NJW9 211 aa7.24□□□□□ -1.25
HDAC6-216ENST00000468949 M0R3G1 203 aa7.24□□□□□ -1.25
HDAC6-216ENST00000468949 MRPL33O75394 65 aaKnown RBP7.24□□□□□ -1.25
HDAC6-216ENST00000468949 WISP2O76076 250 aa7.24□□□□□ -1.25
HDAC6-216ENST00000468949 AQP8O94778 261 aa7.24□□□□□ -1.25
HDAC6-216ENST00000468949 AGFG2O95081 481 aa7.24□□□□□ -1.25
HDAC6-216ENST00000468949 RENP00797 406 aa7.24□□□□□ -1.25
HDAC6-216ENST00000468949 IGHG1P01857 330 aa7.24□□□□□ -1.25
HDAC6-216ENST00000468949 HMGN1P05114 100 aa7.24□□□□□ -1.25
HDAC6-216ENST00000468949 TMIGD3P0DMS9 266 aaPredicted RBP7.24□□□□□ -1.25
HDAC6-216ENST00000468949 IFNGR1P15260 489 aa7.24□□□□□ -1.25
HDAC6-216ENST00000468949 SDHAP31040 664 aa7.24□□□□□ -1.25
HDAC6-216ENST00000468949 UQCRC1P31930 480 aa7.24□□□□□ -1.25
HDAC6-216ENST00000468949 AQP4P55087 323 aa7.24□□□□□ -1.25
HDAC6-216ENST00000468949 BIDP55957 195 aa7.24□□□□□ -1.25
HDAC6-216ENST00000468949 CLDN17P56750 224 aa7.24□□□□□ -1.25
HDAC6-216ENST00000468949 CLRN1P58418 232 aa7.24□□□□□ -1.25
HDAC6-216ENST00000468949 RAP1BP61224 184 aa7.24□□□□□ -1.25
HDAC6-216ENST00000468949 RAP1AP62834 184 aa7.24□□□□□ -1.25
HDAC6-216ENST00000468949 ERVK-25P63136 954 aa7.24□□□□□ -1.25
HDAC6-216ENST00000468949 SIRPAP78324 504 aa7.24□□□□□ -1.25
HDAC6-216ENST00000468949 MYBPC1Q00872 1141 aa7.24□□□□□ -1.25
HDAC6-216ENST00000468949 LTBQ06643 244 aa7.24□□□□□ -1.25
HDAC6-216ENST00000468949 CD47Q08722 323 aa7.24□□□□□ -1.25
HDAC6-216ENST00000468949 ZP4Q12836 540 aa7.24□□□□□ -1.25
HDAC6-216ENST00000468949 NPRL3Q12980 569 aa7.24□□□□□ -1.25
HDAC6-216ENST00000468949 ITGADQ13349 1161 aa7.24□□□□□ -1.25
HDAC6-216ENST00000468949 KRR1Q13601 381 aaKnown RBP7.24□□□□□ -1.25
HDAC6-216ENST00000468949 MELKQ14680 651 aa7.24□□□□□ -1.25
HDAC6-216ENST00000468949 POU4F3Q15319 338 aa7.24□□□□□ -1.25
HDAC6-216ENST00000468949 PGGHGQ32M88 737 aa7.24□□□□□ -1.25
HDAC6-216ENST00000468949 TTC23Q5W5X9 447 aa7.24□□□□□ -1.25
HDAC6-216ENST00000468949 CARD17Q5XLA6 110 aa7.24□□□□□ -1.25
HDAC6-216ENST00000468949 CLEC18BQ6UXF7 455 aa7.24□□□□□ -1.25
HDAC6-216ENST00000468949 Q6ZPB1 254 aaPredicted RBP7.24□□□□□ -1.25
HDAC6-216ENST00000468949 SLC35D2Q76EJ3 337 aa7.24□□□□□ -1.25
HDAC6-216ENST00000468949 FGD2Q7Z6J4 655 aa7.24□□□□□ -1.25
HDAC6-216ENST00000468949 ZNF100Q8IYN0 542 aa7.24□□□□□ -1.25
HDAC6-216ENST00000468949 GCNT2Q8N0V5 402 aa7.24□□□□□ -1.25
HDAC6-216ENST00000468949 KDM8Q8N371 416 aa7.24□□□□□ -1.25
HDAC6-216ENST00000468949 DHRSXQ8N5I4 330 aa7.24□□□□□ -1.25
HDAC6-216ENST00000468949 IQCF1Q8N6M8 205 aa7.24□□□□□ -1.25
HDAC6-216ENST00000468949 CLEC18CQ8NCF0 446 aa7.24□□□□□ -1.25
HDAC6-216ENST00000468949 SETD9Q8NE22 299 aa7.24□□□□□ -1.25
HDAC6-216ENST00000468949 FAM81AQ8TBF8 368 aa7.24□□□□□ -1.25
HDAC6-216ENST00000468949 OTULINQ96BN8 352 aa7.24□□□□□ -1.25
HDAC6-216ENST00000468949 ADAD1Q96M93 576 aaKnown RBP7.24□□□□□ -1.25
HDAC6-216ENST00000468949 GPX7Q96SL4 187 aaPredicted RBP7.24□□□□□ -1.25
HDAC6-216ENST00000468949 SLC29A1Q99808 456 aa7.24□□□□□ -1.25
HDAC6-216ENST00000468949 APOL4Q9BPW4 351 aa7.24□□□□□ -1.25
HDAC6-216ENST00000468949 GABARAPL3Q9BY60 117 aa7.24□□□□□ -1.25
HDAC6-216ENST00000468949 GP6Q9HCN6 339 aa7.24□□□□□ -1.25
HDAC6-216ENST00000468949 B3GAT2Q9NPZ5 323 aa7.24□□□□□ -1.25
HDAC6-216ENST00000468949 PARPBPQ9NWS1 579 aa7.24□□□□□ -1.25
HDAC6-216ENST00000468949 KLHL21Q9UJP4 597 aa7.24□□□□□ -1.25
HDAC6-216ENST00000468949 CLEC4AQ9UMR7 237 aa7.24□□□□□ -1.25
HDAC6-216ENST00000468949 GMPPBQ9Y5P6 360 aa7.24□□□□□ -1.25
HDAC6-216ENST00000468949 IER3IP1Q9Y5U9 82 aa7.24□□□□□ -1.25
HDAC6-216ENST00000468949 A0A1B0GUH1 482 aa7.23□□□□□ -1.25
HDAC6-216ENST00000468949 MBD3L4A6NDZ8 208 aaPredicted RBP7.23□□□□□ -1.25
HDAC6-216ENST00000468949 MBD3L3A6NE82 208 aaPredicted RBP7.23□□□□□ -1.25
HDAC6-216ENST00000468949 MBD3L5A6NJ08 208 aaPredicted RBP7.23□□□□□ -1.25
HDAC6-216ENST00000468949 NPIPB13A6NJU9 1138 aa7.23□□□□□ -1.25
HDAC6-216ENST00000468949 HSPB2A8KAH6 182 aa7.23□□□□□ -1.25
HDAC6-216ENST00000468949 ZNF724A8MTY0 619 aa7.23□□□□□ -1.25
HDAC6-216ENST00000468949 NPIPB4C9JG80 1138 aa7.23□□□□□ -1.25
HDAC6-216ENST00000468949 H0YJX3 145 aa7.23□□□□□ -1.25
HDAC6-216ENST00000468949 CCL21O00585 134 aa7.23□□□□□ -1.25
HDAC6-216ENST00000468949 IDH3BO43837 385 aa7.23□□□□□ -1.25
HDAC6-216ENST00000468949 FZD7O75084 574 aa7.23□□□□□ -1.25
HDAC6-216ENST00000468949 SLC43A1O75387 559 aa7.23□□□□□ -1.25
HDAC6-216ENST00000468949 SNAP29O95721 258 aa7.23□□□□□ -1.25
HDAC6-216ENST00000468949 TGM6O95932 706 aa7.23□□□□□ -1.25
HDAC6-216ENST00000468949 IGHMP01871 453 aa7.23□□□□□ -1.25
HDAC6-216ENST00000468949 YES1P07947 543 aa7.23□□□□□ -1.25
HDAC6-216ENST00000468949 GRK5P34947 590 aa7.23□□□□□ -1.25
HDAC6-216ENST00000468949 ACVR1BP36896 505 aa7.23□□□□□ -1.25
HDAC6-216ENST00000468949 CA7P43166 264 aa7.23□□□□□ -1.25
HDAC6-216ENST00000468949 SLC16A1P53985 500 aa7.23□□□□□ -1.25
HDAC6-216ENST00000468949 RPL27P61353 136 aaKnown RBP7.23□□□□□ -1.25
HDAC6-216ENST00000468949 H3F3AP84243 136 aa7.23□□□□□ -1.25
HDAC6-216ENST00000468949 MRPL49Q13405 166 aaKnown RBP7.23□□□□□ -1.25
HDAC6-216ENST00000468949 GINS1Q14691 196 aa7.23□□□□□ -1.25
HDAC6-216ENST00000468949 SLC17A1Q14916 467 aa7.23□□□□□ -1.25
HDAC6-216ENST00000468949 PDK3Q15120 406 aa7.23□□□□□ -1.25
HDAC6-216ENST00000468949 PTGES3Q15185 160 aaKnown RBP7.23□□□□□ -1.25
HDAC6-216ENST00000468949 HSPB2Q16082 182 aa7.23□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 64.6 ms