RNA–Protein interactions for RNA: ENST00000468600.1

SSB-208, Transcript of Sjogren syndrome antigen B, humanhuman

TSL 2

Gene SSB, Length 290 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSB-208ENST00000468600 PKNOX1P55347 436 aa0.97□□□□□ -2.25
SSB-208ENST00000468600 HSF2Q03933 536 aa0.97□□□□□ -2.25
SSB-208ENST00000468600 BAMBIQ13145 260 aa0.97□□□□□ -2.25
SSB-208ENST00000468600 CBX3Q13185 183 aa0.97□□□□□ -2.25
SSB-208ENST00000468600 ZBED5Q49AG3 693 aa0.97□□□□□ -2.25
SSB-208ENST00000468600 LDLRAP1Q5SW96 308 aa0.97□□□□□ -2.25
SSB-208ENST00000468600 KDM7AQ6ZMT4 941 aa0.97□□□□□ -2.25
SSB-208ENST00000468600 STRADAQ7RTN6 431 aa0.97□□□□□ -2.25
SSB-208ENST00000468600 CLDN19Q8N6F1 224 aa0.97□□□□□ -2.25
SSB-208ENST00000468600 SPC24Q8NBT2 197 aa0.97□□□□□ -2.25
SSB-208ENST00000468600 ATP6V1E2Q96A05 226 aa0.97□□□□□ -2.25
SSB-208ENST00000468600 DNAJC1Q96KC8 554 aaKnown RBP0.97□□□□□ -2.25
SSB-208ENST00000468600 GORASP2Q9H8Y8 452 aa0.97□□□□□ -2.25
SSB-208ENST00000468600 CALYQ9NYX4 217 aa0.97□□□□□ -2.25
SSB-208ENST00000468600 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP0.97□□□□□ -2.25
SSB-208ENST00000468600 SPATA7Q9P0W8 599 aa0.97□□□□□ -2.25
SSB-208ENST00000468600 SEC14L3Q9UDX4 400 aa0.97□□□□□ -2.25
SSB-208ENST00000468600 IL19Q9UHD0 177 aa0.97□□□□□ -2.25
SSB-208ENST00000468600 PRRC2BQ5JSZ5 2229 aaKnown RBP0.97□□□□□ -2.25
SSB-208ENST00000468600 SCN1AP35498 2009 aa0.96□□□□□ -2.26
SSB-208ENST00000468600 IGHV3-74A0A0B4J1X5 117 aa0.96□□□□□ -2.26
SSB-208ENST00000468600 VPS26AO75436 327 aa0.96□□□□□ -2.26
SSB-208ENST00000468600 OR4F21O95013 312 aa0.96□□□□□ -2.26
SSB-208ENST00000468600 CD74P04233 296 aa0.96□□□□□ -2.26
SSB-208ENST00000468600 HPCAL1P37235 193 aa0.96□□□□□ -2.26
SSB-208ENST00000468600 SLC11A1P49279 550 aa0.96□□□□□ -2.26
SSB-208ENST00000468600 STARD6P59095 220 aa0.96□□□□□ -2.26
SSB-208ENST00000468600 ACVR1Q04771 509 aa0.96□□□□□ -2.26
SSB-208ENST00000468600 PLD1Q13393 1074 aa0.96□□□□□ -2.26
SSB-208ENST00000468600 SLC25A52Q3SY17 297 aa0.96□□□□□ -2.26
SSB-208ENST00000468600 TMED8Q6PL24 325 aaPredicted RBP0.96□□□□□ -2.26
SSB-208ENST00000468600 SMARCD3Q6STE5 483 aa0.96□□□□□ -2.26
SSB-208ENST00000468600 SPINT4Q6UDR6 99 aa0.96□□□□□ -2.26
SSB-208ENST00000468600 ELMOD2Q8IZ81 293 aa0.96□□□□□ -2.26
SSB-208ENST00000468600 ZADH2Q8N4Q0 377 aa0.96□□□□□ -2.26
SSB-208ENST00000468600 C1orf64Q8NEQ6 169 aa0.96□□□□□ -2.26
SSB-208ENST00000468600 OR52B4Q8NGK2 314 aa0.96□□□□□ -2.26
SSB-208ENST00000468600 C17orf50Q8WW18 174 aa0.96□□□□□ -2.26
SSB-208ENST00000468600 POPDC2Q9HBU9 364 aa0.96□□□□□ -2.26
SSB-208ENST00000468600 VAT1LQ9HCJ6 419 aa0.96□□□□□ -2.26
SSB-208ENST00000468600 GNG12Q9UBI6 72 aa0.96□□□□□ -2.26
SSB-208ENST00000468600 FETUBQ9UGM5 382 aa0.96□□□□□ -2.26
SSB-208ENST00000468600 MGAT4BQ9UQ53 548 aa0.96□□□□□ -2.26
SSB-208ENST00000468600 ADAMTS13Q76LX8 1427 aa0.96□□□□□ -2.26
SSB-208ENST00000468600 AHDC1Q5TGY3 1603 aaPredicted RBP0.96□□□□□ -2.26
SSB-208ENST00000468600 DOCK8Q8NF50 2099 aa0.95□□□□□ -2.26
SSB-208ENST00000468600 ZSWIM8A7E2V4 1837 aa0.95□□□□□ -2.26
SSB-208ENST00000468600 IGHV3OR16-8A0A075B7F1 116 aa0.95□□□□□ -2.26
SSB-208ENST00000468600 TAPBPO15533 448 aa0.95□□□□□ -2.26
SSB-208ENST00000468600 PFKFB2O60825 505 aa0.95□□□□□ -2.26
SSB-208ENST00000468600 RP2O75695 350 aa0.95□□□□□ -2.26
SSB-208ENST00000468600 BCAS2O75934 225 aaPredicted RBP0.95□□□□□ -2.26
SSB-208ENST00000468600 MT-ATP6P00846 226 aa0.95□□□□□ -2.26
SSB-208ENST00000468600 TNFSF9P41273 254 aa0.95□□□□□ -2.26
SSB-208ENST00000468600 MAP3K8P41279 467 aa0.95□□□□□ -2.26
SSB-208ENST00000468600 NCBP2P52298 156 aaKnown RBP eCLIP0.95□□□□□ -2.26
SSB-208ENST00000468600 NCBP1Q09161 790 aaKnown RBP0.95□□□□□ -2.26
SSB-208ENST00000468600 VGLL4Q14135 290 aa0.95□□□□□ -2.26
SSB-208ENST00000468600 TP53I3Q53FA7 332 aa0.95□□□□□ -2.26
SSB-208ENST00000468600 FAM78AQ5JUQ0 283 aa0.95□□□□□ -2.26
SSB-208ENST00000468600 OR52E8Q6IFG1 317 aa0.95□□□□□ -2.26
SSB-208ENST00000468600 LINC00173Q6ZV60 143 aa0.95□□□□□ -2.26
SSB-208ENST00000468600 MISPQ8IVT2 679 aa0.95□□□□□ -2.26
SSB-208ENST00000468600 KDM8Q8N371 416 aa0.95□□□□□ -2.26
SSB-208ENST00000468600 LRRC52Q8N7C0 313 aa0.95□□□□□ -2.26
SSB-208ENST00000468600 ST20-AS1Q8NBB2 130 aa0.95□□□□□ -2.26
SSB-208ENST00000468600 TMEM104Q8NE00 496 aa0.95□□□□□ -2.26
SSB-208ENST00000468600 ZNF382Q96SR6 550 aa0.95□□□□□ -2.26
SSB-208ENST00000468600 LZTS2Q9BRK4 669 aa0.95□□□□□ -2.26
SSB-208ENST00000468600 FICDQ9BVA6 458 aa0.95□□□□□ -2.26
SSB-208ENST00000468600 MRPL13Q9BYD1 178 aaKnown RBP0.95□□□□□ -2.26
SSB-208ENST00000468600 ISYNA1Q9NPH2 558 aa0.95□□□□□ -2.26
SSB-208ENST00000468600 KLHL28Q9NXS3 571 aa0.95□□□□□ -2.26
SSB-208ENST00000468600 NCAPD2Q15021 1401 aa0.95□□□□□ -2.26
SSB-208ENST00000468600 CEMIPQ8WUJ3 1361 aa0.95□□□□□ -2.26
SSB-208ENST00000468600 SPAG9O60271 1321 aaKnown RBP0.94□□□□□ -2.26
SSB-208ENST00000468600 CCDC182A6NF36 153 aa0.94□□□□□ -2.26
SSB-208ENST00000468600 BCHEP06276 602 aa0.94□□□□□ -2.26
SSB-208ENST00000468600 OR56A5P0C7T3 313 aa0.94□□□□□ -2.26
SSB-208ENST00000468600 FUT1P19526 365 aa0.94□□□□□ -2.26
SSB-208ENST00000468600 PCMT1P22061 227 aa0.94□□□□□ -2.26
SSB-208ENST00000468600 SOX6P35712 828 aa0.94□□□□□ -2.26
SSB-208ENST00000468600 PDIA2Q13087 525 aaKnown RBP0.94□□□□□ -2.26
SSB-208ENST00000468600 RBMY1FQ15415 496 aaKnown RBP0.94□□□□□ -2.26
SSB-208ENST00000468600 KRTAP21-3Q3LHN1 58 aa0.94□□□□□ -2.26
SSB-208ENST00000468600 CARD16Q5EG05 197 aa0.94□□□□□ -2.26
SSB-208ENST00000468600 CATSPER4Q7RTX7 472 aa0.94□□□□□ -2.26
SSB-208ENST00000468600 MOB3BQ86TA1 216 aa0.94□□□□□ -2.26
SSB-208ENST00000468600 CLEC4FQ8N1N0 589 aa0.94□□□□□ -2.26
SSB-208ENST00000468600 MREGQ8N565 214 aa0.94□□□□□ -2.26
SSB-208ENST00000468600 Q8NDZ9 215 aa0.94□□□□□ -2.26
SSB-208ENST00000468600 NOXO1Q8NFA2 376 aa0.94□□□□□ -2.26
SSB-208ENST00000468600 CAMK2N2Q96S95 79 aa0.94□□□□□ -2.26
SSB-208ENST00000468600 TM2D3Q9BRN9 247 aa0.94□□□□□ -2.26
SSB-208ENST00000468600 FRMD8P1Q9BZ68 369 aaPredicted RBP0.94□□□□□ -2.26
SSB-208ENST00000468600 RAB17Q9H0T7 212 aa0.94□□□□□ -2.26
SSB-208ENST00000468600 RBKSQ9H477 322 aa0.94□□□□□ -2.26
SSB-208ENST00000468600 REEP4Q9H6H4 257 aa0.94□□□□□ -2.26
SSB-208ENST00000468600 SYNDIG1Q9H7V2 258 aa0.94□□□□□ -2.26
SSB-208ENST00000468600 UBE2ZQ9H832 354 aaPredicted RBP0.94□□□□□ -2.26
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms