RNA–Protein interactions for RNA: ENST00000468143.1

CDHR3-205, Transcript of cadherin related family member 3, humanhuman

TSL 4

Gene CDHR3, Length 575 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR3-205ENST00000468143 PCDHAC1Q9H158 963 aa10.09□□□□□ -0.79
CDHR3-205ENST00000468143 MYLK2Q9H1R3 596 aa10.09□□□□□ -0.79
CDHR3-205ENST00000468143 CRLF2Q9HC73 371 aa10.09□□□□□ -0.79
CDHR3-205ENST00000468143 MEPEQ9NQ76 525 aaPredicted RBP10.09□□□□□ -0.79
CDHR3-205ENST00000468143 ZNF701Q9NV72 531 aaPredicted RBP10.09□□□□□ -0.79
CDHR3-205ENST00000468143 TAS2R5Q9NYW4 299 aa10.09□□□□□ -0.79
CDHR3-205ENST00000468143 MOKQ9UQ07 419 aa10.09□□□□□ -0.79
CDHR3-205ENST00000468143 MGAT4BQ9UQ53 548 aa10.09□□□□□ -0.79
CDHR3-205ENST00000468143 IGHV1-18A0A0C4DH31 117 aa10.08□□□□□ -0.8
CDHR3-205ENST00000468143 H7C1Q1 480 aa10.08□□□□□ -0.8
CDHR3-205ENST00000468143 OVOL3O00110 214 aa10.08□□□□□ -0.8
CDHR3-205ENST00000468143 CXCR6O00574 342 aa10.08□□□□□ -0.8
CDHR3-205ENST00000468143 SMAD7O15105 426 aaKnown RBP10.08□□□□□ -0.8
CDHR3-205ENST00000468143 RNF13O43567 381 aa10.08□□□□□ -0.8
CDHR3-205ENST00000468143 AKAP8O43823 692 aaKnown RBP10.08□□□□□ -0.8
CDHR3-205ENST00000468143 SNX3O60493 162 aa10.08□□□□□ -0.8
CDHR3-205ENST00000468143 NDUFS7O75251 213 aa10.08□□□□□ -0.8
CDHR3-205ENST00000468143 ZNF682O95780 498 aa10.08□□□□□ -0.8
CDHR3-205ENST00000468143 HIST1H2ABP04908 130 aa10.08□□□□□ -0.8
CDHR3-205ENST00000468143 IFNGR1P15260 489 aa10.08□□□□□ -0.8
CDHR3-205ENST00000468143 NCK1P16333 377 aa10.08□□□□□ -0.8
CDHR3-205ENST00000468143 FUT4P22083 530 aa10.08□□□□□ -0.8
CDHR3-205ENST00000468143 FABP6P51161 128 aa10.08□□□□□ -0.8
CDHR3-205ENST00000468143 UGT2B15P54855 530 aa10.08□□□□□ -0.8
CDHR3-205ENST00000468143 BIDP55957 195 aa10.08□□□□□ -0.8
CDHR3-205ENST00000468143 C8orf82Q6P1X6 216 aaPredicted RBP10.08□□□□□ -0.8
CDHR3-205ENST00000468143 ANKRD16Q6P6B7 361 aa10.08□□□□□ -0.8
CDHR3-205ENST00000468143 Q71RC1 249 aaPredicted RBP10.08□□□□□ -0.8
CDHR3-205ENST00000468143 HIST3H2AQ7L7L0 130 aa10.08□□□□□ -0.8
CDHR3-205ENST00000468143 ARPINQ7Z6K5 226 aa10.08□□□□□ -0.8
CDHR3-205ENST00000468143 PXKQ7Z7A4 578 aa10.08□□□□□ -0.8
CDHR3-205ENST00000468143 VTCN1Q7Z7D3 282 aa10.08□□□□□ -0.8
CDHR3-205ENST00000468143 C20orf196Q8IYI0 205 aa10.08□□□□□ -0.8
CDHR3-205ENST00000468143 OR6N1Q8NGY5 312 aa10.08□□□□□ -0.8
CDHR3-205ENST00000468143 HIST1H2ACQ93077 130 aa10.08□□□□□ -0.8
CDHR3-205ENST00000468143 C18orf12Q96KH6 178 aa10.08□□□□□ -0.8
CDHR3-205ENST00000468143 TRAF4Q9BUZ4 470 aaPredicted RBP10.08□□□□□ -0.8
CDHR3-205ENST00000468143 NSRP1Q9H0G5 558 aaKnown RBP10.08□□□□□ -0.8
CDHR3-205ENST00000468143 NELFAQ9H3P2 528 aa10.08□□□□□ -0.8
CDHR3-205ENST00000468143 ALG2Q9H553 416 aa10.08□□□□□ -0.8
CDHR3-205ENST00000468143 NANSQ9NR45 359 aa10.08□□□□□ -0.8
CDHR3-205ENST00000468143 RHCGQ9UBD6 479 aa10.08□□□□□ -0.8
CDHR3-205ENST00000468143 NOX1Q9Y5S8 564 aa10.08□□□□□ -0.8
CDHR3-205ENST00000468143 SNX13Q9Y5W8 968 aa10.08□□□□□ -0.8
CDHR3-205ENST00000468143 RAI1Q7Z5J4 1906 aaPredicted RBP10.07□□□□□ -0.8
CDHR3-205ENST00000468143 AKAP9Q99996 3911 aa10.07□□□□□ -0.8
CDHR3-205ENST00000468143 F8P00451 2351 aa10.07□□□□□ -0.8
CDHR3-205ENST00000468143 PRR14LQ5THK1 2151 aa10.07□□□□□ -0.8
CDHR3-205ENST00000468143 ZNF503-AS2A6NEH8 195 aa10.07□□□□□ -0.8
CDHR3-205ENST00000468143 ATP6V1G2-DDX39BF2Z307 99 aa10.07□□□□□ -0.8
CDHR3-205ENST00000468143 BLOC1S5-TXNDC5H3BN57 136 aa10.07□□□□□ -0.8
CDHR3-205ENST00000468143 RPL36A-HNRNPH2H7BZ11 118 aa10.07□□□□□ -0.8
CDHR3-205ENST00000468143 J3KTA2 159 aa10.07□□□□□ -0.8
CDHR3-205ENST00000468143 OR5F1O95221 314 aa10.07□□□□□ -0.8
CDHR3-205ENST00000468143 FOSL1P15407 271 aa10.07□□□□□ -0.8
CDHR3-205ENST00000468143 PAX1P15863 534 aa10.07□□□□□ -0.8
CDHR3-205ENST00000468143 FUT1P19526 365 aa10.07□□□□□ -0.8
CDHR3-205ENST00000468143 TTKP33981 857 aa10.07□□□□□ -0.8
CDHR3-205ENST00000468143 CAPZA2P47755 286 aa10.07□□□□□ -0.8
CDHR3-205ENST00000468143 GSK3BP49841 420 aa10.07□□□□□ -0.8
CDHR3-205ENST00000468143 PSME3P61289 254 aa10.07□□□□□ -0.8
CDHR3-205ENST00000468143 LSM11P83369 360 aaKnown RBP eCLIP10.07□□□□□ -0.8
CDHR3-205ENST00000468143 MELKQ14680 651 aa10.07□□□□□ -0.8
CDHR3-205ENST00000468143 PRSS57Q6UWY2 283 aa10.07□□□□□ -0.8
CDHR3-205ENST00000468143 SLC35D2Q76EJ3 337 aa10.07□□□□□ -0.8
CDHR3-205ENST00000468143 SLC46A3Q7Z3Q1 461 aa10.07□□□□□ -0.8
CDHR3-205ENST00000468143 TMEM239Q8WW34 195 aa10.07□□□□□ -0.8
CDHR3-205ENST00000468143 HTRA1Q92743 480 aa10.07□□□□□ -0.8
CDHR3-205ENST00000468143 CMTM5Q96DZ9 223 aa10.07□□□□□ -0.8
CDHR3-205ENST00000468143 TRMT61AQ96FX7 289 aaKnown RBP10.07□□□□□ -0.8
CDHR3-205ENST00000468143 BOD1Q96IK1 185 aa10.07□□□□□ -0.8
CDHR3-205ENST00000468143 DHRS9Q9BPW9 319 aa10.07□□□□□ -0.8
CDHR3-205ENST00000468143 ZNF426Q9BUY5 554 aa10.07□□□□□ -0.8
CDHR3-205ENST00000468143 SLC19A3Q9BZV2 496 aa10.07□□□□□ -0.8
CDHR3-205ENST00000468143 SEC61A2Q9H9S3 476 aa10.07□□□□□ -0.8
CDHR3-205ENST00000468143 FKRPQ9H9S5 495 aa10.07□□□□□ -0.8
CDHR3-205ENST00000468143 C20orf141Q9NUB4 165 aa10.07□□□□□ -0.8
CDHR3-205ENST00000468143 GDF2Q9UK05 429 aaPredicted RBP10.07□□□□□ -0.8
CDHR3-205ENST00000468143 AP3M1Q9Y2T2 418 aa10.07□□□□□ -0.8
CDHR3-205ENST00000468143 ARPC4-TTLL3A0A0A6YYG9 625 aa10.06□□□□□ -0.8
CDHR3-205ENST00000468143 PIP5K1CO60331 668 aa10.06□□□□□ -0.8
CDHR3-205ENST00000468143 OR7A10O76100 309 aa10.06□□□□□ -0.8
CDHR3-205ENST00000468143 SERPINA1P01009 418 aa10.06□□□□□ -0.8
CDHR3-205ENST00000468143 MT-ND1P03886 318 aa10.06□□□□□ -0.8
CDHR3-205ENST00000468143 F13BP05160 661 aa10.06□□□□□ -0.8
CDHR3-205ENST00000468143 CELA3BP08861 270 aa10.06□□□□□ -0.8
CDHR3-205ENST00000468143 INHBBP09529 407 aa10.06□□□□□ -0.8
CDHR3-205ENST00000468143 ASAH2BP0C7U1 165 aa10.06□□□□□ -0.8
CDHR3-205ENST00000468143 ZP4Q12836 540 aa10.06□□□□□ -0.8
CDHR3-205ENST00000468143 LAPTM4AQ15012 233 aa10.06□□□□□ -0.8
CDHR3-205ENST00000468143 AGAP6Q5VW22 663 aa10.06□□□□□ -0.8
CDHR3-205ENST00000468143 HACD2Q6Y1H2 254 aa10.06□□□□□ -0.8
CDHR3-205ENST00000468143 FKBP9P1Q75LS8 142 aa10.06□□□□□ -0.8
CDHR3-205ENST00000468143 NANOGNBQ7Z5D8 188 aa10.06□□□□□ -0.8
CDHR3-205ENST00000468143 MEX3DQ86XN8 651 aaKnown RBP10.06□□□□□ -0.8
CDHR3-205ENST00000468143 FBXL14Q8N1E6 418 aa10.06□□□□□ -0.8
CDHR3-205ENST00000468143 MUC15Q8N387 334 aa10.06□□□□□ -0.8
CDHR3-205ENST00000468143 RNF148Q8N7C7 305 aa10.06□□□□□ -0.8
CDHR3-205ENST00000468143 MAGEE2Q8TD90 523 aaPredicted RBP10.06□□□□□ -0.8
CDHR3-205ENST00000468143 LZICQ8WZA0 190 aa10.06□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms