RNA–Protein interactions for RNA: ENST00000467819.5

COL9A3-207, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 1 (best)

Gene COL9A3, Length 993 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-207ENST00000467819 TMBIM4Q9HC24 238 aa18.23■□□□□ 0.51
COL9A3-207ENST00000467819 DYNLRB1Q9NP97 96 aa18.23■□□□□ 0.51
COL9A3-207ENST00000467819 TCF7L2Q9NQB0 619 aa18.23■□□□□ 0.51
COL9A3-207ENST00000467819 SELENONQ9NZV5 590 aa18.23■□□□□ 0.51
COL9A3-207ENST00000467819 USP22Q9UPT9 525 aa18.23■□□□□ 0.51
COL9A3-207ENST00000467819 MS4A18H0YCH9 400 aa18.22■□□□□ 0.51
COL9A3-207ENST00000467819 ERCC1P07992 297 aaPredicted RBP18.22■□□□□ 0.51
COL9A3-207ENST00000467819 HLA-DOBP13765 273 aa18.22■□□□□ 0.51
COL9A3-207ENST00000467819 RGS8P57771 180 aaPredicted RBP18.22■□□□□ 0.51
COL9A3-207ENST00000467819 DAG1Q14118 895 aa18.22■□□□□ 0.51
COL9A3-207ENST00000467819 MS4A18Q3C1V0 323 aa18.22■□□□□ 0.51
COL9A3-207ENST00000467819 PAGE3Q5JUK9 113 aa18.22■□□□□ 0.51
COL9A3-207ENST00000467819 ULK3Q6PHR2 472 aa18.22■□□□□ 0.51
COL9A3-207ENST00000467819 NET1Q7Z628 596 aaPredicted RBP18.22■□□□□ 0.51
COL9A3-207ENST00000467819 CDK20Q8IZL9 346 aa18.22■□□□□ 0.51
COL9A3-207ENST00000467819 ADPRHL1Q8NDY3 354 aa18.22■□□□□ 0.51
COL9A3-207ENST00000467819 SPDL1Q96EA4 605 aa18.22■□□□□ 0.51
COL9A3-207ENST00000467819 SLC47A1Q96FL8 570 aa18.22■□□□□ 0.51
COL9A3-207ENST00000467819 DOK1Q99704 481 aa18.22■□□□□ 0.51
COL9A3-207ENST00000467819 NOX3Q9HBY0 568 aa18.22■□□□□ 0.51
COL9A3-207ENST00000467819 CCDC167Q9P0B6 97 aa18.22■□□□□ 0.51
COL9A3-207ENST00000467819 VAPAQ9P0L0 249 aa18.22■□□□□ 0.51
COL9A3-207ENST00000467819 TESQ9UGI8 421 aaKnown RBP18.22■□□□□ 0.51
COL9A3-207ENST00000467819 FBXO9Q9UK97 447 aaPredicted RBP18.22■□□□□ 0.51
COL9A3-207ENST00000467819 A0A087WUJ7 227 aa18.21■□□□□ 0.51
COL9A3-207ENST00000467819 LOC102725191A0A1B0GVB3 256 aa18.21■□□□□ 0.51
COL9A3-207ENST00000467819 TMEM129A0AVI4 362 aa18.21■□□□□ 0.51
COL9A3-207ENST00000467819 ZNF500O60304 480 aaPredicted RBP18.21■□□□□ 0.51
COL9A3-207ENST00000467819 HLA-HP01893 362 aa18.21■□□□□ 0.51
COL9A3-207ENST00000467819 CD79AP11912 226 aa18.21■□□□□ 0.51
COL9A3-207ENST00000467819 PPIBP23284 216 aaKnown RBP18.21■□□□□ 0.51
COL9A3-207ENST00000467819 AQP1P29972 269 aa18.21■□□□□ 0.51
COL9A3-207ENST00000467819 POU3F1Q03052 451 aaPredicted RBP18.21■□□□□ 0.51
COL9A3-207ENST00000467819 SCARB2Q14108 478 aa18.21■□□□□ 0.51
COL9A3-207ENST00000467819 ADRM1Q16186 407 aa18.21■□□□□ 0.51
COL9A3-207ENST00000467819 FAM91A1Q658Y4 838 aa18.21■□□□□ 0.51
COL9A3-207ENST00000467819 BLOC1S3Q6QNY0 202 aa18.21■□□□□ 0.51
COL9A3-207ENST00000467819 CKAP2Q8WWK9 683 aa18.21■□□□□ 0.51
COL9A3-207ENST00000467819 NEU4Q8WWR8 484 aaPredicted RBP18.21■□□□□ 0.51
COL9A3-207ENST00000467819 EBF4Q9BQW3 602 aa18.21■□□□□ 0.51
COL9A3-207ENST00000467819 ASPNQ9BXN1 380 aa18.21■□□□□ 0.51
COL9A3-207ENST00000467819 TMEM27Q9HBJ8 222 aa18.21■□□□□ 0.51
COL9A3-207ENST00000467819 MED29Q9NX70 200 aa18.21■□□□□ 0.51
COL9A3-207ENST00000467819 BGLAPP02818 100 aa18.2■□□□□ 0.5
COL9A3-207ENST00000467819 THBS2P35442 1172 aa18.2■□□□□ 0.5
COL9A3-207ENST00000467819 MRPL19P49406 292 aaKnown RBP18.2■□□□□ 0.5
COL9A3-207ENST00000467819 PIGFQ07326 219 aa18.2■□□□□ 0.5
COL9A3-207ENST00000467819 MFSD13AQ14CX5 517 aa18.2■□□□□ 0.5
COL9A3-207ENST00000467819 OR1Q1Q15612 314 aa18.2■□□□□ 0.5
COL9A3-207ENST00000467819 CR1LQ2VPA4 569 aa18.2■□□□□ 0.5
COL9A3-207ENST00000467819 CCDC36Q8IYA8 594 aa18.2■□□□□ 0.5
COL9A3-207ENST00000467819 C20orf196Q8IYI0 205 aa18.2■□□□□ 0.5
COL9A3-207ENST00000467819 C10orf53Q8N6V4 93 aa18.2■□□□□ 0.5
COL9A3-207ENST00000467819 MS4A3Q96HJ5 214 aa18.2■□□□□ 0.5
COL9A3-207ENST00000467819 TXNDC15Q96J42 360 aa18.2■□□□□ 0.5
COL9A3-207ENST00000467819 EPYCQ99645 322 aa18.2■□□□□ 0.5
COL9A3-207ENST00000467819 C19orf24Q9BVV8 132 aa18.2■□□□□ 0.5
COL9A3-207ENST00000467819 TPK1Q9H3S4 243 aa18.2■□□□□ 0.5
COL9A3-207ENST00000467819 IKZF5Q9H5V7 419 aa18.2■□□□□ 0.5
COL9A3-207ENST00000467819 B3GAT2Q9NPZ5 323 aa18.2■□□□□ 0.5
COL9A3-207ENST00000467819 NIPSNAP3AQ9UFN0 247 aaPredicted RBP18.2■□□□□ 0.5
COL9A3-207ENST00000467819 SLC13A4Q9UKG4 626 aa18.2■□□□□ 0.5
COL9A3-207ENST00000467819 CORINQ9Y5Q5 1042 aa18.2■□□□□ 0.5
COL9A3-207ENST00000467819 A0A0B4J2E0 115 aa18.19■□□□□ 0.5
COL9A3-207ENST00000467819 A0A1B0GX12 115 aa18.19■□□□□ 0.5
COL9A3-207ENST00000467819 LRRN3E7EW58 273 aa18.19■□□□□ 0.5
COL9A3-207ENST00000467819 SERPINI2O75830 405 aa18.19■□□□□ 0.5
COL9A3-207ENST00000467819 IGFBP1P08833 259 aaPredicted RBP18.19■□□□□ 0.5
COL9A3-207ENST00000467819 ADRA2AP08913 450 aa18.19■□□□□ 0.5
COL9A3-207ENST00000467819 SLC6A2P23975 617 aa18.19■□□□□ 0.5
COL9A3-207ENST00000467819 GIFP27352 417 aa18.19■□□□□ 0.5
COL9A3-207ENST00000467819 IL2RGP31785 369 aa18.19■□□□□ 0.5
COL9A3-207ENST00000467819 IDH3AP50213 366 aa18.19■□□□□ 0.5
COL9A3-207ENST00000467819 AQP5P55064 265 aa18.19■□□□□ 0.5
COL9A3-207ENST00000467819 PMS2P3Q13401 168 aa18.19■□□□□ 0.5
COL9A3-207ENST00000467819 CAMK2DQ13557 499 aa18.19■□□□□ 0.5
COL9A3-207ENST00000467819 GSG1Q2KHT4 349 aa18.19■□□□□ 0.5
COL9A3-207ENST00000467819 ZNF813Q6ZN06 617 aa18.19■□□□□ 0.5
COL9A3-207ENST00000467819 WDFY1Q8IWB7 410 aa18.19■□□□□ 0.5
COL9A3-207ENST00000467819 IL17RDQ8NFM7 739 aa18.19■□□□□ 0.5
COL9A3-207ENST00000467819 SLC41A3Q96GZ6 507 aa18.19■□□□□ 0.5
COL9A3-207ENST00000467819 C7orf26Q96N11 449 aa18.19■□□□□ 0.5
COL9A3-207ENST00000467819 MOGAT1Q96PD6 335 aa18.19■□□□□ 0.5
COL9A3-207ENST00000467819 SNX18Q96RF0 628 aa18.19■□□□□ 0.5
COL9A3-207ENST00000467819 ZNF607Q96SK3 696 aa18.19■□□□□ 0.5
COL9A3-207ENST00000467819 WFDC6Q9BQY6 131 aa18.19■□□□□ 0.5
COL9A3-207ENST00000467819 SLCO1B3Q9NPD5 702 aa18.19■□□□□ 0.5
COL9A3-207ENST00000467819 B3GNT2Q9NY97 397 aa18.19■□□□□ 0.5
COL9A3-207ENST00000467819 POFUT2Q9Y2G5 429 aa18.19■□□□□ 0.5
COL9A3-207ENST00000467819 CMAHPQ9Y471 501 aa18.19■□□□□ 0.5
COL9A3-207ENST00000467819 ANK2Q01484 3957 aa18.19■□□□□ 0.5
COL9A3-207ENST00000467819 TRBV5-3A0A0A0MS03 114 aa18.18■□□□□ 0.5
COL9A3-207ENST00000467819 PRORSD1PA6NEY8 169 aa18.18■□□□□ 0.5
COL9A3-207ENST00000467819 LYNX1G3V0Z9 82 aa18.18■□□□□ 0.5
COL9A3-207ENST00000467819 TPST2O60704 377 aa18.18■□□□□ 0.5
COL9A3-207ENST00000467819 TGDSO95455 350 aa18.18■□□□□ 0.5
COL9A3-207ENST00000467819 LYNX1P0DP58 116 aa18.18■□□□□ 0.5
COL9A3-207ENST00000467819 B4GALT1P15291 398 aa18.18■□□□□ 0.5
COL9A3-207ENST00000467819 APEX1P27695 318 aaKnown RBP18.18■□□□□ 0.5
COL9A3-207ENST00000467819 CHN2P52757 468 aa18.18■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 61.1 ms