RNA–Protein interactions for RNA: ENST00000467302.5

PRPF38B-204, Transcript of pre-mRNA processing factor 38B, humanhuman

TSL 1 (best)

Gene PRPF38B, Length 2,043 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38B-204ENST00000467302 LCN1P31025 176 aa13.42□□□□□ -0.26
PRPF38B-204ENST00000467302 HOXD11P31277 338 aaPredicted RBP13.42□□□□□ -0.26
PRPF38B-204ENST00000467302 RPL4P36578 427 aaKnown RBP13.42□□□□□ -0.26
PRPF38B-204ENST00000467302 MAGEB1P43366 347 aa13.42□□□□□ -0.26
PRPF38B-204ENST00000467302 BLVRAP53004 296 aa13.42□□□□□ -0.26
PRPF38B-204ENST00000467302 ZNHIT3Q15649 155 aaPredicted RBP13.42□□□□□ -0.26
PRPF38B-204ENST00000467302 PWWP2BQ6NUJ5 590 aa13.42□□□□□ -0.26
PRPF38B-204ENST00000467302 SLC35F3Q8IY50 421 aa13.42□□□□□ -0.26
PRPF38B-204ENST00000467302 SLC38A6Q8IZM9 456 aa13.42□□□□□ -0.26
PRPF38B-204ENST00000467302 UXS1Q8NBZ7 420 aa13.42□□□□□ -0.26
PRPF38B-204ENST00000467302 OR10A4Q9H209 315 aa13.42□□□□□ -0.26
PRPF38B-204ENST00000467302 LIN7BQ9HAP6 207 aa13.42□□□□□ -0.26
PRPF38B-204ENST00000467302 KLK11Q9UBX7 282 aa13.42□□□□□ -0.26
PRPF38B-204ENST00000467302 FOXJ3Q9UPW0 622 aa13.42□□□□□ -0.26
PRPF38B-204ENST00000467302 DTX4Q9Y2E6 619 aa13.42□□□□□ -0.26
PRPF38B-204ENST00000467302 ZNF337Q9Y3M9 751 aa13.42□□□□□ -0.26
PRPF38B-204ENST00000467302 V9GY05 133 aa13.42□□□□□ -0.26
PRPF38B-204ENST00000467302 EML5Q05BV3 1969 aa13.42□□□□□ -0.26
PRPF38B-204ENST00000467302 ANKRD20A5PA0PJZ0 165 aa13.42□□□□□ -0.26
PRPF38B-204ENST00000467302 EFCAB7A8K855 629 aa13.42□□□□□ -0.26
PRPF38B-204ENST00000467302 KRT33AO76009 404 aa13.42□□□□□ -0.26
PRPF38B-204ENST00000467302 OR7A10O76100 309 aa13.42□□□□□ -0.26
PRPF38B-204ENST00000467302 BCKDHBP21953 392 aa13.42□□□□□ -0.26
PRPF38B-204ENST00000467302 CXCL12P48061 93 aa13.42□□□□□ -0.26
PRPF38B-204ENST00000467302 GXYLT1Q4G148 440 aa13.42□□□□□ -0.26
PRPF38B-204ENST00000467302 C14orf28Q4W4Y0 310 aa13.42□□□□□ -0.26
PRPF38B-204ENST00000467302 WDR45BQ5MNZ6 344 aa13.42□□□□□ -0.26
PRPF38B-204ENST00000467302 OLFML2AQ68BL7 652 aa13.42□□□□□ -0.26
PRPF38B-204ENST00000467302 OGFOD3Q6PK18 319 aa13.42□□□□□ -0.26
PRPF38B-204ENST00000467302 NPSR1Q6W5P4 371 aa13.42□□□□□ -0.26
PRPF38B-204ENST00000467302 Q7L0L9 218 aa13.42□□□□□ -0.26
PRPF38B-204ENST00000467302 UBALD2Q8IYN6 164 aa13.42□□□□□ -0.26
PRPF38B-204ENST00000467302 RCBTB1Q8NDN9 531 aa13.42□□□□□ -0.26
PRPF38B-204ENST00000467302 OR6K6Q8NGW6 343 aa13.42□□□□□ -0.26
PRPF38B-204ENST00000467302 FCAMRQ8WWV6 532 aa13.42□□□□□ -0.26
PRPF38B-204ENST00000467302 DNASE2BQ8WZ79 361 aa13.42□□□□□ -0.26
PRPF38B-204ENST00000467302 RASD2Q96D21 266 aa13.42□□□□□ -0.26
PRPF38B-204ENST00000467302 GPX7Q96SL4 187 aaPredicted RBP13.42□□□□□ -0.26
PRPF38B-204ENST00000467302 PIPOXQ9P0Z9 390 aa13.42□□□□□ -0.26
PRPF38B-204ENST00000467302 OR5V1Q9UGF6 321 aa13.42□□□□□ -0.26
PRPF38B-204ENST00000467302 NUP50Q9UKX7 468 aa13.42□□□□□ -0.26
PRPF38B-204ENST00000467302 A0A087WV48 116 aa13.41□□□□□ -0.26
PRPF38B-204ENST00000467302 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa13.41□□□□□ -0.26
PRPF38B-204ENST00000467302 CIB4A0PJX0 185 aa13.41□□□□□ -0.26
PRPF38B-204ENST00000467302 TLCD2A6NGC4 264 aa13.41□□□□□ -0.26
PRPF38B-204ENST00000467302 HRKO00198 91 aa13.41□□□□□ -0.26
PRPF38B-204ENST00000467302 SDC3O75056 442 aa13.41□□□□□ -0.26
PRPF38B-204ENST00000467302 TOXO94900 526 aa13.41□□□□□ -0.26
PRPF38B-204ENST00000467302 GLCEO94923 617 aa13.41□□□□□ -0.26
PRPF38B-204ENST00000467302 RNH1P13489 461 aaKnown RBP13.41□□□□□ -0.26
PRPF38B-204ENST00000467302 MNDAP41218 407 aa13.41□□□□□ -0.26
PRPF38B-204ENST00000467302 CSNK1EP49674 416 aaKnown RBP13.41□□□□□ -0.26
PRPF38B-204ENST00000467302 CLDN12P56749 244 aa13.41□□□□□ -0.26
PRPF38B-204ENST00000467302 ERVK-25P63136 954 aa13.41□□□□□ -0.26
PRPF38B-204ENST00000467302 DHODHQ02127 395 aa13.41□□□□□ -0.26
PRPF38B-204ENST00000467302 RIPPLY1Q0D2K3 151 aa13.41□□□□□ -0.26
PRPF38B-204ENST00000467302 NDUFAF6Q330K2 333 aa13.41□□□□□ -0.26
PRPF38B-204ENST00000467302 APOOLQ6UXV4 268 aa13.41□□□□□ -0.26
PRPF38B-204ENST00000467302 COMMD7Q86VX2 200 aa13.41□□□□□ -0.26
PRPF38B-204ENST00000467302 SERPINA12Q8IW75 414 aa13.41□□□□□ -0.26
PRPF38B-204ENST00000467302 OR6V1Q8N148 313 aa13.41□□□□□ -0.26
PRPF38B-204ENST00000467302 FTMTQ8N4E7 242 aa13.41□□□□□ -0.26
PRPF38B-204ENST00000467302 SPICQ8N5J4 248 aa13.41□□□□□ -0.26
PRPF38B-204ENST00000467302 ZNF433Q8N7K0 673 aaPredicted RBP13.41□□□□□ -0.26
PRPF38B-204ENST00000467302 CEP76Q8TAP6 659 aa13.41□□□□□ -0.26
PRPF38B-204ENST00000467302 ADAMTS18Q8TE60 1221 aa13.41□□□□□ -0.26
PRPF38B-204ENST00000467302 GUCD1Q96NT3 240 aa13.41□□□□□ -0.26
PRPF38B-204ENST00000467302 TGM7Q96PF1 710 aa13.41□□□□□ -0.26
PRPF38B-204ENST00000467302 UTP23Q9BRU9 249 aaKnown RBP13.41□□□□□ -0.26
PRPF38B-204ENST00000467302 MRI1Q9BV20 369 aa13.41□□□□□ -0.26
PRPF38B-204ENST00000467302 PLCL2Q9UPR0 1127 aa13.41□□□□□ -0.26
PRPF38B-204ENST00000467302 BLACEA4D250 179 aa13.4□□□□□ -0.26
PRPF38B-204ENST00000467302 TGFBR3LH3BV60 316 aa13.4□□□□□ -0.26
PRPF38B-204ENST00000467302 K7ESF4 209 aa13.4□□□□□ -0.26
PRPF38B-204ENST00000467302 PSMD9O00233 223 aa13.4□□□□□ -0.26
PRPF38B-204ENST00000467302 ARPC1BO15143 372 aaKnown RBP13.4□□□□□ -0.26
PRPF38B-204ENST00000467302 PIAS2O75928 621 aa13.4□□□□□ -0.26
PRPF38B-204ENST00000467302 RAB40ALP0C0E4 278 aa13.4□□□□□ -0.26
PRPF38B-204ENST00000467302 CALCBP10092 127 aa13.4□□□□□ -0.26
PRPF38B-204ENST00000467302 CPN1P15169 458 aa13.4□□□□□ -0.26
PRPF38B-204ENST00000467302 ZNF250P15622 560 aa13.4□□□□□ -0.26
PRPF38B-204ENST00000467302 P2RX1P51575 399 aa13.4□□□□□ -0.26
PRPF38B-204ENST00000467302 RPS15P62841 145 aaKnown RBP13.4□□□□□ -0.26
PRPF38B-204ENST00000467302 GLDNQ6ZMI3 551 aaPredicted RBP13.4□□□□□ -0.26
PRPF38B-204ENST00000467302 DNM1P46Q6ZS02 220 aa13.4□□□□□ -0.26
PRPF38B-204ENST00000467302 OR2T4Q8NH00 348 aa13.4□□□□□ -0.26
PRPF38B-204ENST00000467302 SYNPRQ8TBG9 265 aa13.4□□□□□ -0.26
PRPF38B-204ENST00000467302 RAB40AQ8WXH6 277 aa13.4□□□□□ -0.26
PRPF38B-204ENST00000467302 HAVCR1Q96D42 359 aa13.4□□□□□ -0.26
PRPF38B-204ENST00000467302 S100A16Q96FQ6 103 aaKnown RBP13.4□□□□□ -0.26
PRPF38B-204ENST00000467302 ZNF285Q96NJ3 590 aa13.4□□□□□ -0.26
PRPF38B-204ENST00000467302 IER2Q9BTL4 223 aa13.4□□□□□ -0.26
PRPF38B-204ENST00000467302 ALG12Q9BV10 488 aa13.4□□□□□ -0.26
PRPF38B-204ENST00000467302 CHRNA10Q9GZZ6 450 aa13.4□□□□□ -0.26
PRPF38B-204ENST00000467302 RAB33BQ9H082 229 aa13.4□□□□□ -0.26
PRPF38B-204ENST00000467302 CDCP1Q9H5V8 836 aa13.4□□□□□ -0.26
PRPF38B-204ENST00000467302 SOHLH2Q9NX45 425 aa13.4□□□□□ -0.26
PRPF38B-204ENST00000467302 HCN3Q9P1Z3 774 aa13.4□□□□□ -0.26
PRPF38B-204ENST00000467302 SPAG17Q6Q759 2223 aa13.4□□□□□ -0.26
PRPF38B-204ENST00000467302 IGKV1D-42A0A075B6H8 117 aa13.4□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms