RNA–Protein interactions for RNA: ENST00000467263.1

SMC4-207, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 401 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-207ENST00000467263 ZBED5Q49AG3 693 aa2.26□□□□□ -2.05
SMC4-207ENST00000467263 CES3Q6UWW8 571 aa2.26□□□□□ -2.05
SMC4-207ENST00000467263 GET4Q7L5D6 327 aaPredicted RBP2.26□□□□□ -2.05
SMC4-207ENST00000467263 FGF14Q92915 247 aa2.26□□□□□ -2.05
SMC4-207ENST00000467263 LRRC58Q96CX6 371 aa2.26□□□□□ -2.05
SMC4-207ENST00000467263 CXorf40BQ96DE9 158 aa2.26□□□□□ -2.05
SMC4-207ENST00000467263 NDFIP1Q9BT67 221 aa2.26□□□□□ -2.05
SMC4-207ENST00000467263 ZNF430Q9H8G1 570 aaPredicted RBP2.26□□□□□ -2.05
SMC4-207ENST00000467263 CTPS2Q9NRF8 586 aa2.26□□□□□ -2.05
SMC4-207ENST00000467263 SPATA7Q9P0W8 599 aa2.26□□□□□ -2.05
SMC4-207ENST00000467263 XCL2Q9UBD3 114 aa2.26□□□□□ -2.05
SMC4-207ENST00000467263 ZNF629Q9UEG4 869 aaPredicted RBP2.26□□□□□ -2.05
SMC4-207ENST00000467263 OR12D3Q9UGF7 316 aa2.26□□□□□ -2.05
SMC4-207ENST00000467263 COL1A2P08123 1366 aa2.25□□□□□ -2.05
SMC4-207ENST00000467263 RPAP1Q9BWH6 1393 aaPredicted RBP2.25□□□□□ -2.05
SMC4-207ENST00000467263 KIF16BQ96L93 1317 aa2.25□□□□□ -2.05
SMC4-207ENST00000467263 IGLV3-22A0A075B6J6 115 aa2.25□□□□□ -2.05
SMC4-207ENST00000467263 IGKV1D-17A0A075B6S4 117 aa2.25□□□□□ -2.05
SMC4-207ENST00000467263 H3BNH8 94 aa2.25□□□□□ -2.05
SMC4-207ENST00000467263 B4GALT5O43286 388 aa2.25□□□□□ -2.05
SMC4-207ENST00000467263 IGHV3-43DP0DP04 118 aa2.25□□□□□ -2.05
SMC4-207ENST00000467263 ELP6Q0PNE2 266 aa2.25□□□□□ -2.05
SMC4-207ENST00000467263 KRTAP21-2Q3LI59 83 aa2.25□□□□□ -2.05
SMC4-207ENST00000467263 COA6Q5JTJ3 125 aaKnown RBP2.25□□□□□ -2.05
SMC4-207ENST00000467263 NANOGP8Q6NSW7 305 aa2.25□□□□□ -2.05
SMC4-207ENST00000467263 CNIH2Q6PI25 160 aa2.25□□□□□ -2.05
SMC4-207ENST00000467263 ECHDC2Q86YB7 292 aa2.25□□□□□ -2.05
SMC4-207ENST00000467263 LYPD1Q8N2G4 141 aa2.25□□□□□ -2.05
SMC4-207ENST00000467263 FAM133AQ8N9E0 248 aa2.25□□□□□ -2.05
SMC4-207ENST00000467263 CD300LFQ8TDQ1 290 aa2.25□□□□□ -2.05
SMC4-207ENST00000467263 THRSPQ92748 146 aa2.25□□□□□ -2.05
SMC4-207ENST00000467263 AURKBQ96GD4 344 aaPredicted RBP2.25□□□□□ -2.05
SMC4-207ENST00000467263 C16orf45Q96MC5 204 aaPredicted RBP2.25□□□□□ -2.05
SMC4-207ENST00000467263 SPIN2AQ99865 258 aa2.25□□□□□ -2.05
SMC4-207ENST00000467263 SPIN2BQ9BPZ2 258 aa2.25□□□□□ -2.05
SMC4-207ENST00000467263 RIOK1Q9BRS2 568 aaKnown RBP2.25□□□□□ -2.05
SMC4-207ENST00000467263 RAB33BQ9H082 229 aa2.25□□□□□ -2.05
SMC4-207ENST00000467263 ING2Q9H160 280 aa2.25□□□□□ -2.05
SMC4-207ENST00000467263 RIBC2Q9H4K1 309 aa2.25□□□□□ -2.05
SMC4-207ENST00000467263 LY9Q9HBG7 655 aa2.25□□□□□ -2.05
SMC4-207ENST00000467263 TM9SF3Q9HD45 589 aa2.25□□□□□ -2.05
SMC4-207ENST00000467263 ZNF222Q9UK12 451 aa2.25□□□□□ -2.05
SMC4-207ENST00000467263 KCNIP3Q9Y2W7 256 aa2.25□□□□□ -2.05
SMC4-207ENST00000467263 FANCIQ9NVI1 1328 aa2.24□□□□□ -2.05
SMC4-207ENST00000467263 IGSF9BQ9UPX0 1349 aa2.24□□□□□ -2.05
SMC4-207ENST00000467263 CIB4A0PJX0 185 aa2.24□□□□□ -2.05
SMC4-207ENST00000467263 OR5B21A6NL26 309 aa2.24□□□□□ -2.05
SMC4-207ENST00000467263 COLCA2A8K830 154 aa2.24□□□□□ -2.05
SMC4-207ENST00000467263 XKRYO14609 159 aa2.24□□□□□ -2.05
SMC4-207ENST00000467263 ARPC3O15145 178 aa2.24□□□□□ -2.05
SMC4-207ENST00000467263 PRKAB2O43741 272 aa2.24□□□□□ -2.05
SMC4-207ENST00000467263 RAMP3O60896 148 aa2.24□□□□□ -2.05
SMC4-207ENST00000467263 PEX11AO75192 247 aa2.24□□□□□ -2.05
SMC4-207ENST00000467263 IGKV1-17P01599 117 aa2.24□□□□□ -2.05
SMC4-207ENST00000467263 KRT8P05787 483 aa2.24□□□□□ -2.05
SMC4-207ENST00000467263 IQCF3P0C7M6 154 aa2.24□□□□□ -2.05
SMC4-207ENST00000467263 HSPA5P11021 654 aaKnown RBP2.24□□□□□ -2.05
SMC4-207ENST00000467263 PGAM1P18669 254 aa2.24□□□□□ -2.05
SMC4-207ENST00000467263 CCR1P32246 355 aa2.24□□□□□ -2.05
SMC4-207ENST00000467263 SOX6P35712 828 aa2.24□□□□□ -2.05
SMC4-207ENST00000467263 ACAA2P42765 397 aaKnown RBP2.24□□□□□ -2.05
SMC4-207ENST00000467263 STK11Q15831 433 aa2.24□□□□□ -2.05
SMC4-207ENST00000467263 UBE2SQ16763 222 aa2.24□□□□□ -2.05
SMC4-207ENST00000467263 C19orf35Q6ZS72 473 aa2.24□□□□□ -2.05
SMC4-207ENST00000467263 PLA2G4DQ86XP0 818 aa2.24□□□□□ -2.05
SMC4-207ENST00000467263 PIANPQ8IYJ0 282 aa2.24□□□□□ -2.05
SMC4-207ENST00000467263 PGAM4Q8N0Y7 254 aa2.24□□□□□ -2.05
SMC4-207ENST00000467263 ZADH2Q8N4Q0 377 aa2.24□□□□□ -2.05
SMC4-207ENST00000467263 MFSD9Q8NBP5 474 aa2.24□□□□□ -2.05
SMC4-207ENST00000467263 VN1R2Q8NFZ6 395 aa2.24□□□□□ -2.05
SMC4-207ENST00000467263 SYNPRQ8TBG9 265 aa2.24□□□□□ -2.05
SMC4-207ENST00000467263 ZNF578Q96N58 590 aaPredicted RBP2.24□□□□□ -2.05
SMC4-207ENST00000467263 SLC38A2Q96QD8 506 aa2.24□□□□□ -2.05
SMC4-207ENST00000467263 YY1AP1Q9H869 796 aa2.24□□□□□ -2.05
SMC4-207ENST00000467263 NOX3Q9HBY0 568 aa2.24□□□□□ -2.05
SMC4-207ENST00000467263 SMOXQ9NWM0 555 aa2.24□□□□□ -2.05
SMC4-207ENST00000467263 BFARQ9NZS9 450 aa2.24□□□□□ -2.05
SMC4-207ENST00000467263 K7EQM0 130 aa2.23□□□□□ -2.05
SMC4-207ENST00000467263 TOM1O60784 492 aa2.23□□□□□ -2.05
SMC4-207ENST00000467263 BGLAPP02818 100 aa2.23□□□□□ -2.05
SMC4-207ENST00000467263 HEXBP07686 556 aa2.23□□□□□ -2.05
SMC4-207ENST00000467263 ZDHHC11BP0C7U3 371 aa2.23□□□□□ -2.05
SMC4-207ENST00000467263 OMGP23515 440 aa2.23□□□□□ -2.05
SMC4-207ENST00000467263 GYG1P46976 350 aa2.23□□□□□ -2.05
SMC4-207ENST00000467263 CRYBB1P53674 252 aaPredicted RBP2.23□□□□□ -2.05
SMC4-207ENST00000467263 SFT2D3Q587I9 215 aa2.23□□□□□ -2.05
SMC4-207ENST00000467263 SLC25A34Q6PIV7 304 aa2.23□□□□□ -2.05
SMC4-207ENST00000467263 LINC00173Q6ZV60 143 aa2.23□□□□□ -2.05
SMC4-207ENST00000467263 VSTM4Q8IW00 320 aa2.23□□□□□ -2.05
SMC4-207ENST00000467263 ZNF679Q8IYX0 411 aa2.23□□□□□ -2.05
SMC4-207ENST00000467263 OR5W2Q8NH69 310 aa2.23□□□□□ -2.05
SMC4-207ENST00000467263 TTC25Q96NG3 672 aa2.23□□□□□ -2.05
SMC4-207ENST00000467263 ZNF607Q96SK3 696 aa2.23□□□□□ -2.05
SMC4-207ENST00000467263 ZNF2Q9BSG1 426 aaPredicted RBP2.23□□□□□ -2.05
SMC4-207ENST00000467263 UGT1A7Q9HAW7 530 aa2.23□□□□□ -2.05
SMC4-207ENST00000467263 UGT1A10Q9HAW8 530 aa2.23□□□□□ -2.05
SMC4-207ENST00000467263 UGT1A8Q9HAW9 530 aa2.23□□□□□ -2.05
SMC4-207ENST00000467263 ZDHHC4Q9NPG8 344 aa2.23□□□□□ -2.05
SMC4-207ENST00000467263 SIRT7Q9NRC8 400 aa2.23□□□□□ -2.05
SMC4-207ENST00000467263 PNPLA6Q8IY17 1366 aa2.23□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms