RNA–Protein interactions for RNA: ENST00000466861.1

SUMO3-205, Transcript of small ubiquitin-like modifier 3, humanhuman

TSL 2

Gene SUMO3, Length 753 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUMO3-205ENST00000466861 CIB4A0PJX0 185 aa20.52■□□□□ 0.88
SUMO3-205ENST00000466861 OR5H1A6NKK0 313 aa20.52■□□□□ 0.88
SUMO3-205ENST00000466861 ZNF587BE7ETH6 402 aa20.52■□□□□ 0.88
SUMO3-205ENST00000466861 hCG_2039718K7EN88 272 aa20.52■□□□□ 0.88
SUMO3-205ENST00000466861 KRT33AO76009 404 aa20.52■□□□□ 0.88
SUMO3-205ENST00000466861 HRGP04196 525 aa20.52■□□□□ 0.88
SUMO3-205ENST00000466861 THBDP07204 575 aa20.52■□□□□ 0.88
SUMO3-205ENST00000466861 ITGA5P08648 1049 aa20.52■□□□□ 0.88
SUMO3-205ENST00000466861 HLA-DOBP13765 273 aa20.52■□□□□ 0.88
SUMO3-205ENST00000466861 MAGEA2P43356 314 aa20.52■□□□□ 0.88
SUMO3-205ENST00000466861 SH3BGRP55822 239 aaPredicted RBP20.52■□□□□ 0.88
SUMO3-205ENST00000466861 STK11Q15831 433 aa20.52■□□□□ 0.88
SUMO3-205ENST00000466861 BEX5Q5H9J7 111 aa20.52■□□□□ 0.88
SUMO3-205ENST00000466861 HDDC2Q7Z4H3 204 aa20.52■□□□□ 0.88
SUMO3-205ENST00000466861 OR6X1Q8NH79 312 aa20.52■□□□□ 0.88
SUMO3-205ENST00000466861 MUCL1Q96DR8 90 aa20.52■□□□□ 0.88
SUMO3-205ENST00000466861 MMADHCQ9H3L0 296 aaPredicted RBP20.52■□□□□ 0.88
SUMO3-205ENST00000466861 STX18Q9P2W9 335 aaKnown RBP20.52■□□□□ 0.88
SUMO3-205ENST00000466861 AQP12BA6NM10 295 aa20.51■□□□□ 0.87
SUMO3-205ENST00000466861 ZNF726A6NNF4 738 aa20.51■□□□□ 0.87
SUMO3-205ENST00000466861 RNF13O43567 381 aa20.51■□□□□ 0.87
SUMO3-205ENST00000466861 KRT36O76013 467 aa20.51■□□□□ 0.87
SUMO3-205ENST00000466861 DNAJA1P31689 397 aaKnown RBP20.51■□□□□ 0.87
SUMO3-205ENST00000466861 NR1H2P55055 460 aa20.51■□□□□ 0.87
SUMO3-205ENST00000466861 RPL18Q07020 188 aaKnown RBP20.51■□□□□ 0.87
SUMO3-205ENST00000466861 TAF11Q15544 211 aa20.51■□□□□ 0.87
SUMO3-205ENST00000466861 GABRA6Q16445 453 aa20.51■□□□□ 0.87
SUMO3-205ENST00000466861 PODNL1Q6PEZ8 512 aa20.51■□□□□ 0.87
SUMO3-205ENST00000466861 C22orf34Q6ZV56 151 aa20.51■□□□□ 0.87
SUMO3-205ENST00000466861 SLC35D2Q76EJ3 337 aa20.51■□□□□ 0.87
SUMO3-205ENST00000466861 TMEM200AQ86VY9 491 aa20.51■□□□□ 0.87
SUMO3-205ENST00000466861 AQP12AQ8IXF9 295 aa20.51■□□□□ 0.87
SUMO3-205ENST00000466861 CLPTM1LQ96KA5 538 aa20.51■□□□□ 0.87
SUMO3-205ENST00000466861 FUZQ9BT04 418 aa20.51■□□□□ 0.87
SUMO3-205ENST00000466861 POLDIP3Q9BY77 421 aaKnown RBP20.51■□□□□ 0.87
SUMO3-205ENST00000466861 B3GAT2Q9NPZ5 323 aa20.51■□□□□ 0.87
SUMO3-205ENST00000466861 SLC35F4A4IF30 521 aa20.5■□□□□ 0.87
SUMO3-205ENST00000466861 DEFB108AA8MXU0 73 aa20.5■□□□□ 0.87
SUMO3-205ENST00000466861 CENPBD1B2RD01 187 aa20.5■□□□□ 0.87
SUMO3-205ENST00000466861 C11orf98E9PRG8 122 aa20.5■□□□□ 0.87
SUMO3-205ENST00000466861 BLOC1S5-TXNDC5H3BN57 136 aa20.5■□□□□ 0.87
SUMO3-205ENST00000466861 GADD45GO95257 159 aa20.5■□□□□ 0.87
SUMO3-205ENST00000466861 HOXB1P14653 301 aaPredicted RBP20.5■□□□□ 0.87
SUMO3-205ENST00000466861 FUT4P22083 530 aa20.5■□□□□ 0.87
SUMO3-205ENST00000466861 RPS4XP62701 263 aaKnown RBP20.5■□□□□ 0.87
SUMO3-205ENST00000466861 CHRNB3Q05901 458 aa20.5■□□□□ 0.87
SUMO3-205ENST00000466861 TAB1Q15750 504 aa20.5■□□□□ 0.87
SUMO3-205ENST00000466861 FAM98BQ52LJ0 330 aaKnown RBP20.5■□□□□ 0.87
SUMO3-205ENST00000466861 FGD3Q5JSP0 725 aa20.5■□□□□ 0.87
SUMO3-205ENST00000466861 C20orf196Q8IYI0 205 aa20.5■□□□□ 0.87
SUMO3-205ENST00000466861 GPR137CQ8N3F9 429 aa20.5■□□□□ 0.87
SUMO3-205ENST00000466861 CCDC124Q96CT7 223 aaKnown RBP20.5■□□□□ 0.87
SUMO3-205ENST00000466861 LURAP1Q96LR2 239 aa20.5■□□□□ 0.87
SUMO3-205ENST00000466861 CLEC4MQ9H2X3 399 aaPredicted RBP20.5■□□□□ 0.87
SUMO3-205ENST00000466861 OBP2BQ9NPH6 170 aa20.5■□□□□ 0.87
SUMO3-205ENST00000466861 INIPQ9NRY2 104 aa20.5■□□□□ 0.87
SUMO3-205ENST00000466861 A0A1W2PRG6 482 aa20.49■□□□□ 0.87
SUMO3-205ENST00000466861 CYSRT1A8MQ03 144 aa20.49■□□□□ 0.87
SUMO3-205ENST00000466861 EFCAB9A8MZ26 197 aa20.49■□□□□ 0.87
SUMO3-205ENST00000466861 GSC2O15499 205 aa20.49■□□□□ 0.87
SUMO3-205ENST00000466861 KLF4O43474 513 aa20.49■□□□□ 0.87
SUMO3-205ENST00000466861 PIP5K1CO60331 668 aa20.49■□□□□ 0.87
SUMO3-205ENST00000466861 UPK3AO75631 287 aa20.49■□□□□ 0.87
SUMO3-205ENST00000466861 SAGP10523 405 aaPredicted RBP20.49■□□□□ 0.87
SUMO3-205ENST00000466861 IFNGR1P15260 489 aa20.49■□□□□ 0.87
SUMO3-205ENST00000466861 MAKP20794 623 aa20.49■□□□□ 0.87
SUMO3-205ENST00000466861 DAP3P51398 398 aaKnown RBP20.49■□□□□ 0.87
SUMO3-205ENST00000466861 HMGA2P52926 109 aa20.49■□□□□ 0.87
SUMO3-205ENST00000466861 PRPS1P60891 318 aa20.49■□□□□ 0.87
SUMO3-205ENST00000466861 TSC22D1Q15714 1073 aa20.49■□□□□ 0.87
SUMO3-205ENST00000466861 HMBOX1Q6NT76 420 aa20.49■□□□□ 0.87
SUMO3-205ENST00000466861 MAGEE2Q8TD90 523 aaPredicted RBP20.49■□□□□ 0.87
SUMO3-205ENST00000466861 ZC3HAV1LQ96H79 300 aaKnown RBP20.49■□□□□ 0.87
SUMO3-205ENST00000466861 TXNDC15Q96J42 360 aa20.49■□□□□ 0.87
SUMO3-205ENST00000466861 SEPHS2Q99611 448 aa20.49■□□□□ 0.87
SUMO3-205ENST00000466861 NDEL1Q9GZM8 345 aa20.49■□□□□ 0.87
SUMO3-205ENST00000466861 MED29Q9NX70 200 aa20.49■□□□□ 0.87
SUMO3-205ENST00000466861 EDARQ9UNE0 448 aa20.49■□□□□ 0.87
SUMO3-205ENST00000466861 AMDHD2Q9Y303 409 aa20.49■□□□□ 0.87
SUMO3-205ENST00000466861 NAV2Q8IVL1 2488 aa20.49■□□□□ 0.87
SUMO3-205ENST00000466861 APCP25054 2843 aa20.49■□□□□ 0.87
SUMO3-205ENST00000466861 SH3PXD2BA1X283 911 aa20.48■□□□□ 0.87
SUMO3-205ENST00000466861 RAD51DO75771 328 aa20.48■□□□□ 0.87
SUMO3-205ENST00000466861 DIRAS1O95057 198 aa20.48■□□□□ 0.87
SUMO3-205ENST00000466861 BCL10O95999 233 aa20.48■□□□□ 0.87
SUMO3-205ENST00000466861 LSM11P83369 360 aaKnown RBP eCLIP20.48■□□□□ 0.87
SUMO3-205ENST00000466861 SPIBQ01892 262 aa20.48■□□□□ 0.87
SUMO3-205ENST00000466861 ROR2Q01974 943 aaKnown RBP20.48■□□□□ 0.87
SUMO3-205ENST00000466861 FOXD4Q12950 439 aaPredicted RBP20.48■□□□□ 0.87
SUMO3-205ENST00000466861 GK3PQ14409 553 aa20.48■□□□□ 0.87
SUMO3-205ENST00000466861 PPA1Q15181 289 aa20.48■□□□□ 0.87
SUMO3-205ENST00000466861 FBXW10Q5XX13 1052 aa20.48■□□□□ 0.87
SUMO3-205ENST00000466861 OAFQ86UD1 273 aa20.48■□□□□ 0.87
SUMO3-205ENST00000466861 LINC00471Q8N535 108 aa20.48■□□□□ 0.87
SUMO3-205ENST00000466861 OR4K5Q8NGD3 323 aa20.48■□□□□ 0.87
SUMO3-205ENST00000466861 SLC25A44Q96H78 314 aaPredicted RBP20.48■□□□□ 0.87
SUMO3-205ENST00000466861 ALKBH3Q96Q83 286 aaPredicted RBP20.48■□□□□ 0.87
SUMO3-205ENST00000466861 CADM1Q9BY67 442 aaKnown RBP20.48■□□□□ 0.87
SUMO3-205ENST00000466861 MOV10Q9HCE1 1003 aaKnown RBP20.48■□□□□ 0.87
SUMO3-205ENST00000466861 MAGED1Q9Y5V3 778 aaPredicted RBP20.48■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 68.4 ms