RNA–Protein interactions for RNA: ENST00000466845.1

LRCH3-212, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 3

Gene LRCH3, Length 662 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-212ENST00000466845 DUSP16Q9BY84 665 aa5.11□□□□□ -1.59
LRCH3-212ENST00000466845 WWTR1Q9GZV5 400 aa5.11□□□□□ -1.59
LRCH3-212ENST00000466845 PIGMQ9H3S5 423 aa5.11□□□□□ -1.59
LRCH3-212ENST00000466845 NKX1-2Q9UD57 310 aaPredicted RBP5.11□□□□□ -1.59
LRCH3-212ENST00000466845 RAB21Q9UL25 225 aa5.11□□□□□ -1.59
LRCH3-212ENST00000466845 NDRG4Q9ULP0 352 aaKnown RBP5.11□□□□□ -1.59
LRCH3-212ENST00000466845 A4GNTQ9UNA3 340 aa5.11□□□□□ -1.59
LRCH3-212ENST00000466845 SLC7A11Q9UPY5 501 aa5.11□□□□□ -1.59
LRCH3-212ENST00000466845 KCNIP3Q9Y2W7 256 aa5.11□□□□□ -1.59
LRCH3-212ENST00000466845 TNRC6CQ9HCJ0 1690 aaKnown RBP5.11□□□□□ -1.59
LRCH3-212ENST00000466845 TIAM2Q8IVF5 1701 aa5.11□□□□□ -1.59
LRCH3-212ENST00000466845 CACNA1SQ13698 1873 aa5.11□□□□□ -1.59
LRCH3-212ENST00000466845 NAV1Q8NEY1 1877 aa5.11□□□□□ -1.59
LRCH3-212ENST00000466845 A0A087X0K7 114 aa5.1□□□□□ -1.59
LRCH3-212ENST00000466845 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP5.1□□□□□ -1.59
LRCH3-212ENST00000466845 TMEM129A0AVI4 362 aa5.1□□□□□ -1.59
LRCH3-212ENST00000466845 GXYLT2A0PJZ3 443 aa5.1□□□□□ -1.59
LRCH3-212ENST00000466845 CPED1A4D0V7 1026 aa5.1□□□□□ -1.59
LRCH3-212ENST00000466845 TBC1D3FA6NER0 549 aaPredicted RBP5.1□□□□□ -1.59
LRCH3-212ENST00000466845 FAM25AB3EWG3 89 aa5.1□□□□□ -1.59
LRCH3-212ENST00000466845 FAM25CB3EWG5 89 aa5.1□□□□□ -1.59
LRCH3-212ENST00000466845 FAM25GB3EWG6 89 aa5.1□□□□□ -1.59
LRCH3-212ENST00000466845 BHLHE40O14503 412 aa5.1□□□□□ -1.59
LRCH3-212ENST00000466845 CDIPTO14735 213 aa5.1□□□□□ -1.59
LRCH3-212ENST00000466845 SLC16A4O15374 487 aa5.1□□□□□ -1.59
LRCH3-212ENST00000466845 PLIN3O60664 434 aa5.1□□□□□ -1.59
LRCH3-212ENST00000466845 RP2O75695 350 aa5.1□□□□□ -1.59
LRCH3-212ENST00000466845 CEACAM4O75871 244 aa5.1□□□□□ -1.59
LRCH3-212ENST00000466845 GLSO94925 669 aaPredicted RBP5.1□□□□□ -1.59
LRCH3-212ENST00000466845 TDP2O95551 362 aa5.1□□□□□ -1.59
LRCH3-212ENST00000466845 SPP1P10451 314 aa5.1□□□□□ -1.59
LRCH3-212ENST00000466845 MBL2P11226 248 aaPredicted RBP5.1□□□□□ -1.59
LRCH3-212ENST00000466845 MUC1P15941 1255 aaPredicted RBP5.1□□□□□ -1.59
LRCH3-212ENST00000466845 ACADLP28330 430 aa5.1□□□□□ -1.59
LRCH3-212ENST00000466845 FOXN2P32314 431 aa5.1□□□□□ -1.59
LRCH3-212ENST00000466845 RBM34P42696 430 aaKnown RBP5.1□□□□□ -1.59
LRCH3-212ENST00000466845 MAP2K4P45985 399 aa5.1□□□□□ -1.59
LRCH3-212ENST00000466845 BRCC3P46736 316 aa5.1□□□□□ -1.59
LRCH3-212ENST00000466845 GNPDA1P46926 289 aa5.1□□□□□ -1.59
LRCH3-212ENST00000466845 SOX2P48431 317 aa5.1□□□□□ -1.59
LRCH3-212ENST00000466845 CSNK1A1P48729 337 aa5.1□□□□□ -1.59
LRCH3-212ENST00000466845 CCL11P51671 97 aa5.1□□□□□ -1.59
LRCH3-212ENST00000466845 OR4D2P58180 307 aa5.1□□□□□ -1.59
LRCH3-212ENST00000466845 DNAJB13P59910 316 aa5.1□□□□□ -1.59
LRCH3-212ENST00000466845 SLC7A9P82251 487 aa5.1□□□□□ -1.59
LRCH3-212ENST00000466845 RIPPLY1Q0D2K3 151 aa5.1□□□□□ -1.59
LRCH3-212ENST00000466845 GK3PQ14409 553 aa5.1□□□□□ -1.59
LRCH3-212ENST00000466845 GRB14Q14449 540 aa5.1□□□□□ -1.59
LRCH3-212ENST00000466845 KPNB1Q14974 876 aaKnown RBP5.1□□□□□ -1.59
LRCH3-212ENST00000466845 PGGHGQ32M88 737 aa5.1□□□□□ -1.59
LRCH3-212ENST00000466845 C14orf28Q4W4Y0 310 aa5.1□□□□□ -1.59
LRCH3-212ENST00000466845 ACSBG2Q5FVE4 666 aa5.1□□□□□ -1.59
LRCH3-212ENST00000466845 LYSMD4Q5XG99 296 aa5.1□□□□□ -1.59
LRCH3-212ENST00000466845 SAXO2Q658L1 398 aa5.1□□□□□ -1.59
LRCH3-212ENST00000466845 TMEM65Q6PI78 240 aa5.1□□□□□ -1.59
LRCH3-212ENST00000466845 ABHD13Q7L211 337 aa5.1□□□□□ -1.59
LRCH3-212ENST00000466845 FAM220AQ7Z4H9 259 aa5.1□□□□□ -1.59
LRCH3-212ENST00000466845 ISCA2Q86U28 154 aa5.1□□□□□ -1.59
LRCH3-212ENST00000466845 PTOV1Q86YD1 416 aa5.1□□□□□ -1.59
LRCH3-212ENST00000466845 TMEM25Q86YD3 366 aa5.1□□□□□ -1.59
LRCH3-212ENST00000466845 ARRDC1Q8N5I2 433 aa5.1□□□□□ -1.59
LRCH3-212ENST00000466845 TMEM251Q8N6I4 163 aa5.1□□□□□ -1.59
LRCH3-212ENST00000466845 ANKRD31Q8N7Z5 1873 aa5.1□□□□□ -1.59
LRCH3-212ENST00000466845 SDR9C7Q8NEX9 313 aa5.1□□□□□ -1.59
LRCH3-212ENST00000466845 OR52L2PQ8NGH6 319 aa5.1□□□□□ -1.59
LRCH3-212ENST00000466845 LGALS14Q8TCE9 139 aa5.1□□□□□ -1.59
LRCH3-212ENST00000466845 SAP25Q8TEE9 199 aa5.1□□□□□ -1.59
LRCH3-212ENST00000466845 SDR42E1Q8WUS8 393 aa5.1□□□□□ -1.59
LRCH3-212ENST00000466845 SPRYD4Q8WW59 207 aaPredicted RBP5.1□□□□□ -1.59
LRCH3-212ENST00000466845 ADAMTS14Q8WXS8 1223 aa5.1□□□□□ -1.59
LRCH3-212ENST00000466845 VSTM2LQ96N03 204 aa5.1□□□□□ -1.59
LRCH3-212ENST00000466845 ZNF75AQ96N20 296 aa5.1□□□□□ -1.59
LRCH3-212ENST00000466845 ZNF641Q96N77 438 aaPredicted RBP5.1□□□□□ -1.59
LRCH3-212ENST00000466845 ZFP3Q96NJ6 502 aa5.1□□□□□ -1.59
LRCH3-212ENST00000466845 ERGIC2Q96RQ1 377 aa5.1□□□□□ -1.59
LRCH3-212ENST00000466845 PLEKHF1Q96S99 279 aa5.1□□□□□ -1.59
LRCH3-212ENST00000466845 PAAF1Q9BRP4 392 aa5.1□□□□□ -1.59
LRCH3-212ENST00000466845 MED18Q9BUE0 208 aa5.1□□□□□ -1.59
LRCH3-212ENST00000466845 BEX2Q9BXY8 128 aa5.1□□□□□ -1.59
LRCH3-212ENST00000466845 SPEF2Q9C093 1822 aa5.1□□□□□ -1.59
LRCH3-212ENST00000466845 GAREM1Q9H706 876 aa5.1□□□□□ -1.59
LRCH3-212ENST00000466845 ANKHQ9HCJ1 492 aa5.1□□□□□ -1.59
LRCH3-212ENST00000466845 Q9N2K0 584 aa5.1□□□□□ -1.59
LRCH3-212ENST00000466845 ASAH2Q9NR71 780 aa5.1□□□□□ -1.59
LRCH3-212ENST00000466845 SLC2A9Q9NRM0 540 aa5.1□□□□□ -1.59
LRCH3-212ENST00000466845 DNMT3BQ9UBC3 853 aaKnown RBP5.1□□□□□ -1.59
LRCH3-212ENST00000466845 RAB26Q9ULW5 256 aa5.1□□□□□ -1.59
LRCH3-212ENST00000466845 PDE10AQ9Y233 779 aa5.1□□□□□ -1.59
LRCH3-212ENST00000466845 SNX24Q9Y343 169 aa5.1□□□□□ -1.59
LRCH3-212ENST00000466845 CLIC4Q9Y696 253 aa5.1□□□□□ -1.59
LRCH3-212ENST00000466845 ARFGEF2Q9Y6D5 1785 aa5.09□□□□□ -1.59
LRCH3-212ENST00000466845 UTRNP46939 3433 aa5.09□□□□□ -1.59
LRCH3-212ENST00000466845 A0A1B0GTI1 187 aa5.09□□□□□ -1.59
LRCH3-212ENST00000466845 A0A1B0GVI7 797 aa5.09□□□□□ -1.59
LRCH3-212ENST00000466845 A0A1W2PPE3 182 aa5.09□□□□□ -1.59
LRCH3-212ENST00000466845 VPS37CA5D8V6 355 aaPredicted RBP5.09□□□□□ -1.59
LRCH3-212ENST00000466845 ZNF840PA6NDX5 716 aa5.09□□□□□ -1.59
LRCH3-212ENST00000466845 DNAJC9-AS1A6NH13 148 aa5.09□□□□□ -1.59
LRCH3-212ENST00000466845 OR11H12B2RN74 326 aa5.09□□□□□ -1.59
LRCH3-212ENST00000466845 TRDCB7Z8K6 153 aa5.09□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms