RNA–Protein interactions for RNA: ENST00000466054.1

LRCH3-211, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 2

Gene LRCH3, Length 683 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-211ENST00000466054 IL1BP01584 269 aa2.66□□□□□ -1.98
LRCH3-211ENST00000466054 ZNF32P17041 273 aa2.66□□□□□ -1.98
LRCH3-211ENST00000466054 HSD17B2P37059 387 aa2.66□□□□□ -1.98
LRCH3-211ENST00000466054 NMUP48645 174 aa2.66□□□□□ -1.98
LRCH3-211ENST00000466054 PPOXP50336 477 aa2.66□□□□□ -1.98
LRCH3-211ENST00000466054 ACVR1Q04771 509 aa2.66□□□□□ -1.98
LRCH3-211ENST00000466054 LRRC63Q05C16 580 aa2.66□□□□□ -1.98
LRCH3-211ENST00000466054 KCTD21Q4G0X4 260 aa2.66□□□□□ -1.98
LRCH3-211ENST00000466054 COA6Q5JTJ3 125 aaKnown RBP2.66□□□□□ -1.98
LRCH3-211ENST00000466054 RGS9BPQ6ZS82 235 aa2.66□□□□□ -1.98
LRCH3-211ENST00000466054 H2AFVQ71UI9 128 aa2.66□□□□□ -1.98
LRCH3-211ENST00000466054 H2BFWTQ7Z2G1 175 aa2.66□□□□□ -1.98
LRCH3-211ENST00000466054 TGIF2LXQ8IUE1 241 aa2.66□□□□□ -1.98
LRCH3-211ENST00000466054 EIF1ADQ8N9N8 165 aaKnown RBP2.66□□□□□ -1.98
LRCH3-211ENST00000466054 DUSP18Q8NEJ0 188 aa2.66□□□□□ -1.98
LRCH3-211ENST00000466054 CCDC54Q8NEL0 328 aa2.66□□□□□ -1.98
LRCH3-211ENST00000466054 DTX3LQ8TDB6 740 aa2.66□□□□□ -1.98
LRCH3-211ENST00000466054 SMARCD2Q92925 531 aa2.66□□□□□ -1.98
LRCH3-211ENST00000466054 NPY6RQ99463 290 aa2.66□□□□□ -1.98
LRCH3-211ENST00000466054 TRIM62Q9BVG3 475 aa2.66□□□□□ -1.98
LRCH3-211ENST00000466054 FAIM2Q9BWQ8 316 aa2.66□□□□□ -1.98
LRCH3-211ENST00000466054 MFFQ9GZY8 342 aa2.66□□□□□ -1.98
LRCH3-211ENST00000466054 ANKRD19PQ9H560 264 aa2.66□□□□□ -1.98
LRCH3-211ENST00000466054 NMRAL1Q9HBL8 299 aa2.66□□□□□ -1.98
LRCH3-211ENST00000466054 TMCC3Q9ULS5 477 aa2.66□□□□□ -1.98
LRCH3-211ENST00000466054 MMP17Q9ULZ9 603 aa2.66□□□□□ -1.98
LRCH3-211ENST00000466054 ATAD2BQ9ULI0 1458 aa2.65□□□□□ -1.98
LRCH3-211ENST00000466054 FAM240BA0A1B0GVZ2 78 aa2.65□□□□□ -1.99
LRCH3-211ENST00000466054 H3BNH8 94 aa2.65□□□□□ -1.99
LRCH3-211ENST00000466054 CXCL11O14625 94 aa2.65□□□□□ -1.99
LRCH3-211ENST00000466054 MAGEB4O15481 346 aaPredicted RBP2.65□□□□□ -1.99
LRCH3-211ENST00000466054 MGRN1O60291 552 aa2.65□□□□□ -1.99
LRCH3-211ENST00000466054 UPK3AO75631 287 aa2.65□□□□□ -1.99
LRCH3-211ENST00000466054 SURF6O75683 361 aaKnown RBP2.65□□□□□ -1.99
LRCH3-211ENST00000466054 OR7A10O76100 309 aa2.65□□□□□ -1.99
LRCH3-211ENST00000466054 PLEKP08567 350 aaPredicted RBP2.65□□□□□ -1.99
LRCH3-211ENST00000466054 TCN1P20061 433 aaPredicted RBP2.65□□□□□ -1.99
LRCH3-211ENST00000466054 HOXA9P31269 272 aa2.65□□□□□ -1.99
LRCH3-211ENST00000466054 BTCP35070 178 aa2.65□□□□□ -1.99
LRCH3-211ENST00000466054 VHLP40337 213 aa2.65□□□□□ -1.99
LRCH3-211ENST00000466054 GYG1P46976 350 aa2.65□□□□□ -1.99
LRCH3-211ENST00000466054 CDH4P55283 916 aa2.65□□□□□ -1.99
LRCH3-211ENST00000466054 MRPL28Q13084 256 aaKnown RBP2.65□□□□□ -1.99
LRCH3-211ENST00000466054 PDIA2Q13087 525 aaKnown RBP2.65□□□□□ -1.99
LRCH3-211ENST00000466054 IMMTQ16891 758 aaKnown RBP2.65□□□□□ -1.99
LRCH3-211ENST00000466054 TFDP3Q5H9I0 405 aa2.65□□□□□ -1.99
LRCH3-211ENST00000466054 OR2A2Q6IF42 318 aa2.65□□□□□ -1.99
LRCH3-211ENST00000466054 TPRX1Q8N7U7 411 aa2.65□□□□□ -1.99
LRCH3-211ENST00000466054 OR1L4Q8NGR5 311 aa2.65□□□□□ -1.99
LRCH3-211ENST00000466054 GIMAP1Q8WWP7 306 aa2.65□□□□□ -1.99
LRCH3-211ENST00000466054 TBRG4Q969Z0 631 aaKnown RBP eCLIP2.65□□□□□ -1.99
LRCH3-211ENST00000466054 ASB9Q96DX5 294 aa2.65□□□□□ -1.99
LRCH3-211ENST00000466054 IFT74Q96LB3 600 aa2.65□□□□□ -1.99
LRCH3-211ENST00000466054 CNN2Q99439 309 aaKnown RBP2.65□□□□□ -1.99
LRCH3-211ENST00000466054 ZBTB18Q99592 522 aa2.65□□□□□ -1.99
LRCH3-211ENST00000466054 KCTD14Q9BQ13 255 aaPredicted RBP2.65□□□□□ -1.99
LRCH3-211ENST00000466054 PPA2Q9H2U2 334 aa2.65□□□□□ -1.99
LRCH3-211ENST00000466054 CLMPQ9H6B4 373 aa2.65□□□□□ -1.99
LRCH3-211ENST00000466054 TM9SF3Q9HD45 589 aa2.65□□□□□ -1.99
LRCH3-211ENST00000466054 RBAKQ9NYW8 714 aaPredicted RBP2.65□□□□□ -1.99
LRCH3-211ENST00000466054 SPATA7Q9P0W8 599 aa2.65□□□□□ -1.99
LRCH3-211ENST00000466054 GNPTGQ9UJJ9 305 aa2.65□□□□□ -1.99
LRCH3-211ENST00000466054 NPTNQ9Y639 398 aa2.65□□□□□ -1.99
LRCH3-211ENST00000466054 MAP3K15Q6ZN16 1313 aa2.65□□□□□ -1.99
LRCH3-211ENST00000466054 IGLV4-69A0A075B6H9 119 aa2.64□□□□□ -1.99
LRCH3-211ENST00000466054 OR52A4PA6NMU1 304 aa2.64□□□□□ -1.99
LRCH3-211ENST00000466054 RSPH10B2B2RC85 870 aa2.64□□□□□ -1.99
LRCH3-211ENST00000466054 TMX2-CTNND1H3BSU7 103 aa2.64□□□□□ -1.99
LRCH3-211ENST00000466054 ALDOBP05062 364 aa2.64□□□□□ -1.99
LRCH3-211ENST00000466054 RSPH10BP0C881 870 aa2.64□□□□□ -1.99
LRCH3-211ENST00000466054 GKN3PP0CG01 181 aa2.64□□□□□ -1.99
LRCH3-211ENST00000466054 NPBWR2P48146 333 aa2.64□□□□□ -1.99
LRCH3-211ENST00000466054 TFPI2P48307 235 aa2.64□□□□□ -1.99
LRCH3-211ENST00000466054 CCR6P51684 374 aa2.64□□□□□ -1.99
LRCH3-211ENST00000466054 MNAT1P51948 309 aa2.64□□□□□ -1.99
LRCH3-211ENST00000466054 CRISP3P54108 245 aa2.64□□□□□ -1.99
LRCH3-211ENST00000466054 SEC61GP60059 68 aa2.64□□□□□ -1.99
LRCH3-211ENST00000466054 RPL23AP62750 156 aaKnown RBP2.64□□□□□ -1.99
LRCH3-211ENST00000466054 GGTLC2Q14390 218 aa2.64□□□□□ -1.99
LRCH3-211ENST00000466054 ZNF77Q15935 545 aa2.64□□□□□ -1.99
LRCH3-211ENST00000466054 SGCAQ16586 387 aa2.64□□□□□ -1.99
LRCH3-211ENST00000466054 C6orf226Q5I0X4 101 aa2.64□□□□□ -1.99
LRCH3-211ENST00000466054 LRRC31Q6UY01 552 aa2.64□□□□□ -1.99
LRCH3-211ENST00000466054 RUFY3Q7L099 469 aa2.64□□□□□ -1.99
LRCH3-211ENST00000466054 PEX26Q7Z412 305 aa2.64□□□□□ -1.99
LRCH3-211ENST00000466054 SAXO1Q8IYX7 474 aa2.64□□□□□ -1.99
LRCH3-211ENST00000466054 TMEM158Q8WZ71 300 aa2.64□□□□□ -1.99
LRCH3-211ENST00000466054 EXOSC8Q96B26 276 aaKnown RBP2.64□□□□□ -1.99
LRCH3-211ENST00000466054 SORT1Q99523 831 aa2.64□□□□□ -1.99
LRCH3-211ENST00000466054 HDHD3Q9BSH5 251 aaPredicted RBP2.64□□□□□ -1.99
LRCH3-211ENST00000466054 ZFP14Q9HCL3 533 aa2.64□□□□□ -1.99
LRCH3-211ENST00000466054 DEC1Q9P2X7 70 aa2.64□□□□□ -1.99
LRCH3-211ENST00000466054 PCYOX1Q9UHG3 505 aa2.64□□□□□ -1.99
LRCH3-211ENST00000466054 ZNF639Q9UID6 485 aa2.64□□□□□ -1.99
LRCH3-211ENST00000466054 ZNF223Q9UK11 482 aaPredicted RBP2.64□□□□□ -1.99
LRCH3-211ENST00000466054 PEX16Q9Y5Y5 336 aa2.64□□□□□ -1.99
LRCH3-211ENST00000466054 HEBP2Q9Y5Z4 205 aa2.64□□□□□ -1.99
LRCH3-211ENST00000466054 ZNFX1Q9P2E3 1918 aaKnown RBP2.64□□□□□ -1.99
LRCH3-211ENST00000466054 A0A096LNJ9 63 aa2.63□□□□□ -1.99
LRCH3-211ENST00000466054 KIR2DL5BA0A0G2JN68 375 aa2.63□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms