RNA–Protein interactions for RNA: ENST00000465461.6

CUX1-207, Transcript of cut like homeobox 1, humanhuman

TSL 3

Gene CUX1, Length 502 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-207ENST00000465461 PIK3IP1Q96FE7 263 aa10.26□□□□□ -0.77
CUX1-207ENST00000465461 FAM46AQ96IP4 442 aaKnown RBP10.26□□□□□ -0.77
CUX1-207ENST00000465461 LRGUKQ96M69 825 aa10.26□□□□□ -0.77
CUX1-207ENST00000465461 HS3ST6Q96QI5 342 aa10.26□□□□□ -0.77
CUX1-207ENST00000465461 TNFRSF13CQ96RJ3 184 aa10.26□□□□□ -0.77
CUX1-207ENST00000465461 C1QTNF6Q9BXI9 259 aa10.26□□□□□ -0.77
CUX1-207ENST00000465461 HDHD5Q9BXW7 423 aa10.26□□□□□ -0.77
CUX1-207ENST00000465461 POLDIP3Q9BY77 421 aaKnown RBP10.26□□□□□ -0.77
CUX1-207ENST00000465461 LIME1Q9H400 295 aa10.26□□□□□ -0.77
CUX1-207ENST00000465461 FANCFQ9NPI8 374 aa10.26□□□□□ -0.77
CUX1-207ENST00000465461 MALT1Q9UDY8 824 aa10.26□□□□□ -0.77
CUX1-207ENST00000465461 NOX1Q9Y5S8 564 aa10.26□□□□□ -0.77
CUX1-207ENST00000465461 PRR14LQ5THK1 2151 aa10.26□□□□□ -0.77
CUX1-207ENST00000465461 A0A1W2PRQ8 180 aa10.25□□□□□ -0.77
CUX1-207ENST00000465461 FAM221AA4D161 298 aa10.25□□□□□ -0.77
CUX1-207ENST00000465461 ZNF726A6NNF4 738 aa10.25□□□□□ -0.77
CUX1-207ENST00000465461 DEFB108AA8MXU0 73 aa10.25□□□□□ -0.77
CUX1-207ENST00000465461 EFCAB9A8MZ26 197 aa10.25□□□□□ -0.77
CUX1-207ENST00000465461 KLF4O43474 513 aa10.25□□□□□ -0.77
CUX1-207ENST00000465461 SLC43A1O75387 559 aa10.25□□□□□ -0.77
CUX1-207ENST00000465461 SEC14L2O76054 403 aa10.25□□□□□ -0.77
CUX1-207ENST00000465461 GADD45GO95257 159 aa10.25□□□□□ -0.77
CUX1-207ENST00000465461 CNOT4O95628 575 aaKnown RBP10.25□□□□□ -0.77
CUX1-207ENST00000465461 HRGP04196 525 aa10.25□□□□□ -0.77
CUX1-207ENST00000465461 CRYGSP22914 178 aa10.25□□□□□ -0.77
CUX1-207ENST00000465461 ROR2Q01974 943 aaKnown RBP10.25□□□□□ -0.77
CUX1-207ENST00000465461 RUNX1T1Q06455 604 aa10.25□□□□□ -0.77
CUX1-207ENST00000465461 TRAP1Q12931 704 aaKnown RBP10.25□□□□□ -0.77
CUX1-207ENST00000465461 FHL1Q13642 323 aa10.25□□□□□ -0.77
CUX1-207ENST00000465461 DGCR6Q14129 220 aa10.25□□□□□ -0.77
CUX1-207ENST00000465461 GABRA6Q16445 453 aa10.25□□□□□ -0.77
CUX1-207ENST00000465461 HIKESHIQ53FT3 197 aa10.25□□□□□ -0.77
CUX1-207ENST00000465461 RRM2BQ7LG56 351 aa10.25□□□□□ -0.77
CUX1-207ENST00000465461 TMEM123Q8N131 208 aa10.25□□□□□ -0.77
CUX1-207ENST00000465461 POMGNT2Q8NAT1 580 aa10.25□□□□□ -0.77
CUX1-207ENST00000465461 OR4K5Q8NGD3 323 aa10.25□□□□□ -0.77
CUX1-207ENST00000465461 LIPHQ8WWY8 451 aa10.25□□□□□ -0.77
CUX1-207ENST00000465461 DHRS1Q96LJ7 313 aa10.25□□□□□ -0.77
CUX1-207ENST00000465461 GPA33Q99795 319 aa10.25□□□□□ -0.77
CUX1-207ENST00000465461 FUZQ9BT04 418 aa10.25□□□□□ -0.77
CUX1-207ENST00000465461 CLEC4MQ9H2X3 399 aaPredicted RBP10.25□□□□□ -0.77
CUX1-207ENST00000465461 MUC13Q9H3R2 512 aa10.25□□□□□ -0.77
CUX1-207ENST00000465461 SLC24A3Q9HC58 644 aa10.25□□□□□ -0.77
CUX1-207ENST00000465461 RASSF1Q9NS23 344 aa10.25□□□□□ -0.77
CUX1-207ENST00000465461 VNN3Q9NY84 501 aa10.25□□□□□ -0.77
CUX1-207ENST00000465461 ZNF226Q9NYT6 803 aa10.25□□□□□ -0.77
CUX1-207ENST00000465461 TAS2R16Q9NYV7 291 aa10.25□□□□□ -0.77
CUX1-207ENST00000465461 SLC7A8Q9UHI5 535 aa10.25□□□□□ -0.77
CUX1-207ENST00000465461 AURKCQ9UQB9 309 aa10.25□□□□□ -0.77
CUX1-207ENST00000465461 POMPQ9Y244 141 aa10.25□□□□□ -0.77
CUX1-207ENST00000465461 RCE1Q9Y256 329 aa10.25□□□□□ -0.77
CUX1-207ENST00000465461 ADGRG4Q8IZF6 3080 aa10.25□□□□□ -0.77
CUX1-207ENST00000465461 SETXQ7Z333 2677 aaKnown RBP10.24□□□□□ -0.77
CUX1-207ENST00000465461 A0A096LPE4 126 aa10.24□□□□□ -0.77
CUX1-207ENST00000465461 A0A1W2PPZ6 126 aa10.24□□□□□ -0.77
CUX1-207ENST00000465461 SH3PXD2BA1X283 911 aa10.24□□□□□ -0.77
CUX1-207ENST00000465461 ZNF587BE7ETH6 402 aa10.24□□□□□ -0.77
CUX1-207ENST00000465461 CLOCKO15516 846 aa10.24□□□□□ -0.77
CUX1-207ENST00000465461 STAMBPO95630 424 aa10.24□□□□□ -0.77
CUX1-207ENST00000465461 PLAUP00749 431 aa10.24□□□□□ -0.77
CUX1-207ENST00000465461 IGF2P01344 180 aa10.24□□□□□ -0.77
CUX1-207ENST00000465461 ZNF26P17031 533 aaPredicted RBP10.24□□□□□ -0.77
CUX1-207ENST00000465461 MPGP29372 298 aa10.24□□□□□ -0.77
CUX1-207ENST00000465461 OMPP47874 163 aa10.24□□□□□ -0.77
CUX1-207ENST00000465461 TUBA1BP68363 451 aa10.24□□□□□ -0.77
CUX1-207ENST00000465461 TUBA4AP68366 448 aa10.24□□□□□ -0.77
CUX1-207ENST00000465461 MYBPC1Q00872 1141 aa10.24□□□□□ -0.77
CUX1-207ENST00000465461 CHRNB3Q05901 458 aa10.24□□□□□ -0.77
CUX1-207ENST00000465461 TOP3AQ13472 1001 aaPredicted RBP10.24□□□□□ -0.77
CUX1-207ENST00000465461 MTX3Q5HYI7 312 aa10.24□□□□□ -0.77
CUX1-207ENST00000465461 TUBA1AQ71U36 451 aa10.24□□□□□ -0.77
CUX1-207ENST00000465461 PIWIL3Q7Z3Z3 882 aaKnown RBP10.24□□□□□ -0.77
CUX1-207ENST00000465461 SPATA24Q86W54 205 aa10.24□□□□□ -0.77
CUX1-207ENST00000465461 CDC20BQ86Y33 519 aa10.24□□□□□ -0.77
CUX1-207ENST00000465461 C20orf196Q8IYI0 205 aa10.24□□□□□ -0.77
CUX1-207ENST00000465461 ADGRG5Q8IZF4 528 aa10.24□□□□□ -0.77
CUX1-207ENST00000465461 CDK20Q8IZL9 346 aa10.24□□□□□ -0.77
CUX1-207ENST00000465461 RNF113BQ8IZP6 322 aaKnown RBP10.24□□□□□ -0.77
CUX1-207ENST00000465461 GPR137CQ8N3F9 429 aa10.24□□□□□ -0.77
CUX1-207ENST00000465461 WDR31Q8NA23 367 aa10.24□□□□□ -0.77
CUX1-207ENST00000465461 LRRC75AQ8NAA5 344 aa10.24□□□□□ -0.77
CUX1-207ENST00000465461 ANKK1Q8NFD2 765 aa10.24□□□□□ -0.77
CUX1-207ENST00000465461 CANT1Q8WVQ1 401 aa10.24□□□□□ -0.77
CUX1-207ENST00000465461 LURAP1Q96LR2 239 aa10.24□□□□□ -0.77
CUX1-207ENST00000465461 MUS81Q96NY9 551 aa10.24□□□□□ -0.77
CUX1-207ENST00000465461 ALPK1Q96QP1 1244 aa10.24□□□□□ -0.77
CUX1-207ENST00000465461 ANKRD19PQ9H560 264 aa10.24□□□□□ -0.77
CUX1-207ENST00000465461 CRLF2Q9HC73 371 aa10.24□□□□□ -0.77
CUX1-207ENST00000465461 GPR35Q9HC97 309 aa10.24□□□□□ -0.77
CUX1-207ENST00000465461 INIPQ9NRY2 104 aa10.24□□□□□ -0.77
CUX1-207ENST00000465461 ALPK2Q86TB3 2170 aa10.24□□□□□ -0.77
CUX1-207ENST00000465461 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP10.23□□□□□ -0.77
CUX1-207ENST00000465461 OR5H1A6NKK0 313 aa10.23□□□□□ -0.77
CUX1-207ENST00000465461 AKAP8O43823 692 aaKnown RBP10.23□□□□□ -0.77
CUX1-207ENST00000465461 ATP5HO75947 161 aa10.23□□□□□ -0.77
CUX1-207ENST00000465461 BCL10O95999 233 aa10.23□□□□□ -0.77
CUX1-207ENST00000465461 TSPAN19P0C672 248 aa10.23□□□□□ -0.77
CUX1-207ENST00000465461 PPP3CBP16298 524 aa10.23□□□□□ -0.77
CUX1-207ENST00000465461 LOXP28300 417 aaPredicted RBP10.23□□□□□ -0.77
CUX1-207ENST00000465461 LIMS1P48059 325 aa10.23□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms