RNA–Protein interactions for RNA: ENST00000464616.6

GARNL3-213, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 5

Gene GARNL3, Length 549 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-213ENST00000464616 SMARCD2Q92925 531 aa2.15□□□□□ -2.07
GARNL3-213ENST00000464616 TBRG4Q969Z0 631 aaKnown RBP eCLIP2.15□□□□□ -2.07
GARNL3-213ENST00000464616 EXOSC8Q96B26 276 aaKnown RBP2.15□□□□□ -2.07
GARNL3-213ENST00000464616 ELSPBP1Q96BH3 223 aa2.15□□□□□ -2.07
GARNL3-213ENST00000464616 ZNF285Q96NJ3 590 aa2.15□□□□□ -2.07
GARNL3-213ENST00000464616 TECTBQ96PL2 329 aa2.15□□□□□ -2.07
GARNL3-213ENST00000464616 TMEM246Q9BRR3 403 aa2.15□□□□□ -2.07
GARNL3-213ENST00000464616 NAT9Q9BTE0 207 aa2.15□□□□□ -2.07
GARNL3-213ENST00000464616 ACTR6Q9GZN1 396 aa2.15□□□□□ -2.07
GARNL3-213ENST00000464616 VPS37BQ9H9H4 285 aa2.15□□□□□ -2.07
GARNL3-213ENST00000464616 MMP26Q9NRE1 261 aa2.15□□□□□ -2.07
GARNL3-213ENST00000464616 RAB20Q9NX57 234 aa2.15□□□□□ -2.07
GARNL3-213ENST00000464616 QPCTLQ9NXS2 382 aa2.15□□□□□ -2.07
GARNL3-213ENST00000464616 THSD7BQ9C0I4 1608 aa2.14□□□□□ -2.07
GARNL3-213ENST00000464616 NSG1A0A0A6YYJ2 146 aa2.14□□□□□ -2.07
GARNL3-213ENST00000464616 GFYI3L273 518 aa2.14□□□□□ -2.07
GARNL3-213ENST00000464616 SGK1O00141 431 aa2.14□□□□□ -2.07
GARNL3-213ENST00000464616 XKRYO14609 159 aa2.14□□□□□ -2.07
GARNL3-213ENST00000464616 SUPT7LO94864 414 aa2.14□□□□□ -2.07
GARNL3-213ENST00000464616 FGFR1OPO95684 399 aaKnown RBP2.14□□□□□ -2.07
GARNL3-213ENST00000464616 SERPIND1P05546 499 aa2.14□□□□□ -2.07
GARNL3-213ENST00000464616 IGHV4-34P06331 123 aa2.14□□□□□ -2.07
GARNL3-213ENST00000464616 UQCRFS1P1P0C7P4 283 aa2.14□□□□□ -2.07
GARNL3-213ENST00000464616 NR2C1P13056 603 aa2.14□□□□□ -2.07
GARNL3-213ENST00000464616 ETS2P15036 469 aa2.14□□□□□ -2.07
GARNL3-213ENST00000464616 NCK1P16333 377 aa2.14□□□□□ -2.07
GARNL3-213ENST00000464616 CRISP2P16562 243 aa2.14□□□□□ -2.07
GARNL3-213ENST00000464616 PCMT1P22061 227 aa2.14□□□□□ -2.07
GARNL3-213ENST00000464616 SLC2A5P22732 501 aa2.14□□□□□ -2.07
GARNL3-213ENST00000464616 CHMLP26374 656 aa2.14□□□□□ -2.07
GARNL3-213ENST00000464616 VDAC2P45880 294 aaPredicted RBP2.14□□□□□ -2.07
GARNL3-213ENST00000464616 SSR4P51571 173 aa2.14□□□□□ -2.07
GARNL3-213ENST00000464616 TPMTP51580 245 aa2.14□□□□□ -2.07
GARNL3-213ENST00000464616 MNAT1P51948 309 aa2.14□□□□□ -2.07
GARNL3-213ENST00000464616 SUB1P53999 127 aaKnown RBP eCLIP2.14□□□□□ -2.07
GARNL3-213ENST00000464616 RPS14P62263 151 aaKnown RBP2.14□□□□□ -2.07
GARNL3-213ENST00000464616 MRPS22P82650 360 aaKnown RBP2.14□□□□□ -2.07
GARNL3-213ENST00000464616 PRPSAP1Q14558 356 aa2.14□□□□□ -2.07
GARNL3-213ENST00000464616 BCL7AQ4VC05 210 aa2.14□□□□□ -2.07
GARNL3-213ENST00000464616 LRRC10Q5BKY1 277 aa2.14□□□□□ -2.07
GARNL3-213ENST00000464616 OR2G6Q5TZ20 316 aa2.14□□□□□ -2.07
GARNL3-213ENST00000464616 CARD17Q5XLA6 110 aa2.14□□□□□ -2.07
GARNL3-213ENST00000464616 TRIM40Q6P9F5 258 aa2.14□□□□□ -2.07
GARNL3-213ENST00000464616 ZYG11AQ6WRX3 759 aa2.14□□□□□ -2.07
GARNL3-213ENST00000464616 CERS6Q6ZMG9 384 aa2.14□□□□□ -2.07
GARNL3-213ENST00000464616 SLC22A9Q8IVM8 553 aa2.14□□□□□ -2.07
GARNL3-213ENST00000464616 CNPY4Q8N129 248 aa2.14□□□□□ -2.07
GARNL3-213ENST00000464616 BBS5Q8N3I7 341 aa2.14□□□□□ -2.07
GARNL3-213ENST00000464616 PNKDQ8N490 385 aa2.14□□□□□ -2.07
GARNL3-213ENST00000464616 OR7G2Q8NG99 324 aa2.14□□□□□ -2.07
GARNL3-213ENST00000464616 OR2G2Q8NGZ5 317 aa2.14□□□□□ -2.07
GARNL3-213ENST00000464616 RAB3IL1Q8TBN0 382 aa2.14□□□□□ -2.07
GARNL3-213ENST00000464616 MCOLN3Q8TDD5 553 aa2.14□□□□□ -2.07
GARNL3-213ENST00000464616 FGF14Q92915 247 aa2.14□□□□□ -2.07
GARNL3-213ENST00000464616 SLC38A4Q969I6 547 aa2.14□□□□□ -2.07
GARNL3-213ENST00000464616 CNDP1Q96KN2 507 aa2.14□□□□□ -2.07
GARNL3-213ENST00000464616 OXGR1Q96P68 337 aa2.14□□□□□ -2.07
GARNL3-213ENST00000464616 OR8B4Q96RC9 309 aa2.14□□□□□ -2.07
GARNL3-213ENST00000464616 PANX2Q96RD6 677 aa2.14□□□□□ -2.07
GARNL3-213ENST00000464616 MBOAT4Q96T53 435 aa2.14□□□□□ -2.07
GARNL3-213ENST00000464616 NRTNQ99748 197 aa2.14□□□□□ -2.07
GARNL3-213ENST00000464616 TSG101Q99816 390 aa2.14□□□□□ -2.07
GARNL3-213ENST00000464616 CENPKQ9BS16 269 aa2.14□□□□□ -2.07
GARNL3-213ENST00000464616 NUP58Q9BVL2 599 aa2.14□□□□□ -2.07
GARNL3-213ENST00000464616 OSBPL10Q9BXB5 764 aa2.14□□□□□ -2.07
GARNL3-213ENST00000464616 GON7Q9BXV9 100 aa2.14□□□□□ -2.07
GARNL3-213ENST00000464616 PARP12Q9H0J9 701 aaKnown RBP2.14□□□□□ -2.07
GARNL3-213ENST00000464616 MTRF1LQ9UGC7 380 aaKnown RBP2.14□□□□□ -2.07
GARNL3-213ENST00000464616 ZNF225Q9UK10 706 aa2.14□□□□□ -2.07
GARNL3-213ENST00000464616 STARD10Q9Y365 291 aa2.14□□□□□ -2.07
GARNL3-213ENST00000464616 A0A075B6Q4 140 aa2.13□□□□□ -2.07
GARNL3-213ENST00000464616 TRBV11-1A0A0K0K1C0 115 aa2.13□□□□□ -2.07
GARNL3-213ENST00000464616 PINLYPA6NC86 204 aa2.13□□□□□ -2.07
GARNL3-213ENST00000464616 NKX2-6A6NCS4 301 aa2.13□□□□□ -2.07
GARNL3-213ENST00000464616 FAM231BA6NCW3 169 aa2.13□□□□□ -2.07
GARNL3-213ENST00000464616 GJE1A6NN92 205 aa2.13□□□□□ -2.07
GARNL3-213ENST00000464616 TCP11X1B4DZS4 312 aa2.13□□□□□ -2.07
GARNL3-213ENST00000464616 C12orf77C9JDV5 145 aa2.13□□□□□ -2.07
GARNL3-213ENST00000464616 CDC7O00311 574 aa2.13□□□□□ -2.07
GARNL3-213ENST00000464616 CCL21O00585 134 aa2.13□□□□□ -2.07
GARNL3-213ENST00000464616 HOXC4P09017 264 aaPredicted RBP2.13□□□□□ -2.07
GARNL3-213ENST00000464616 ZNF853P0CG23 659 aa2.13□□□□□ -2.07
GARNL3-213ENST00000464616 SMIM10L1P0DMW3 83 aa2.13□□□□□ -2.07
GARNL3-213ENST00000464616 ADRB3P13945 408 aa2.13□□□□□ -2.07
GARNL3-213ENST00000464616 CD1EP15812 388 aa2.13□□□□□ -2.07
GARNL3-213ENST00000464616 ZNF24P17028 368 aa2.13□□□□□ -2.07
GARNL3-213ENST00000464616 AK4P27144 223 aaPredicted RBP2.13□□□□□ -2.07
GARNL3-213ENST00000464616 GDI1P31150 447 aa2.13□□□□□ -2.07
GARNL3-213ENST00000464616 ATP5C1P36542 298 aaKnown RBP2.13□□□□□ -2.07
GARNL3-213ENST00000464616 ACLYP53396 1101 aa2.13□□□□□ -2.07
GARNL3-213ENST00000464616 PRMT2P55345 433 aa2.13□□□□□ -2.07
GARNL3-213ENST00000464616 ZNF763Q0D2J5 394 aa2.13□□□□□ -2.07
GARNL3-213ENST00000464616 BST1Q10588 318 aa2.13□□□□□ -2.07
GARNL3-213ENST00000464616 TCP10Q12799 353 aa2.13□□□□□ -2.07
GARNL3-213ENST00000464616 GPNMBQ14956 572 aa2.13□□□□□ -2.07
GARNL3-213ENST00000464616 RCN1Q15293 331 aa2.13□□□□□ -2.07
GARNL3-213ENST00000464616 MPPED2Q15777 294 aa2.13□□□□□ -2.07
GARNL3-213ENST00000464616 IL17AQ16552 155 aa2.13□□□□□ -2.07
GARNL3-213ENST00000464616 XKR7Q5GH72 579 aa2.13□□□□□ -2.07
GARNL3-213ENST00000464616 SPANXN2Q5MJ10 180 aa2.13□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms