RNA–Protein interactions for RNA: ENST00000463753.5

COL8A1-205, Transcript of collagen type VIII alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL8A1, Length 2,964 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1-205ENST00000463753 TANGO2Q6ICL3 276 aa3.3□□□□□ -1.88
COL8A1-205ENST00000463753 MRNIPQ6NTE8 343 aa3.3□□□□□ -1.88
COL8A1-205ENST00000463753 CNKSR3Q6P9H4 555 aa3.3□□□□□ -1.88
COL8A1-205ENST00000463753 KIRREL2Q6UWL6 708 aa3.3□□□□□ -1.88
COL8A1-205ENST00000463753 DHRS11Q6UWP2 260 aa3.3□□□□□ -1.88
COL8A1-205ENST00000463753 TMEM207Q6UWW9 146 aa3.3□□□□□ -1.88
COL8A1-205ENST00000463753 C15orf39Q6ZRI6 1047 aa3.3□□□□□ -1.88
COL8A1-205ENST00000463753 CXXC5Q7LFL8 322 aaKnown RBP3.3□□□□□ -1.88
COL8A1-205ENST00000463753 LHFPL4Q7Z7J7 247 aa3.3□□□□□ -1.88
COL8A1-205ENST00000463753 OAFQ86UD1 273 aa3.3□□□□□ -1.88
COL8A1-205ENST00000463753 NR2C2APQ86WQ0 139 aa3.3□□□□□ -1.88
COL8A1-205ENST00000463753 GPSM1Q86YR5 675 aa3.3□□□□□ -1.88
COL8A1-205ENST00000463753 SELENOHQ8IZQ5 122 aaKnown RBP3.3□□□□□ -1.88
COL8A1-205ENST00000463753 GCNT2Q8N0V5 402 aa3.3□□□□□ -1.88
COL8A1-205ENST00000463753 HORMAD2Q8N7B1 307 aa3.3□□□□□ -1.88
COL8A1-205ENST00000463753 TMEM105Q8N8V8 129 aa3.3□□□□□ -1.88
COL8A1-205ENST00000463753 POGLUT1Q8NBL1 392 aa3.3□□□□□ -1.88
COL8A1-205ENST00000463753 AQP11Q8NBQ7 271 aa3.3□□□□□ -1.88
COL8A1-205ENST00000463753 SMAP2Q8WU79 429 aaPredicted RBP3.3□□□□□ -1.88
COL8A1-205ENST00000463753 SECTM1Q8WVN6 248 aa3.3□□□□□ -1.88
COL8A1-205ENST00000463753 HPSE2Q8WWQ2 592 aa3.3□□□□□ -1.88
COL8A1-205ENST00000463753 SLC41A3Q96GZ6 507 aa3.3□□□□□ -1.88
COL8A1-205ENST00000463753 MRGPRX3Q96LB0 322 aa3.3□□□□□ -1.88
COL8A1-205ENST00000463753 OR2A7Q96R45 310 aa3.3□□□□□ -1.88
COL8A1-205ENST00000463753 CDC6Q99741 560 aa3.3□□□□□ -1.88
COL8A1-205ENST00000463753 ORAI3Q9BRQ5 295 aa3.3□□□□□ -1.88
COL8A1-205ENST00000463753 ALKBH7Q9BT30 221 aaPredicted RBP3.3□□□□□ -1.88
COL8A1-205ENST00000463753 G6PC3Q9BUM1 346 aa3.3□□□□□ -1.88
COL8A1-205ENST00000463753 UBQLN3Q9H347 655 aa3.3□□□□□ -1.88
COL8A1-205ENST00000463753 TCEAL2Q9H3H9 227 aaPredicted RBP3.3□□□□□ -1.88
COL8A1-205ENST00000463753 ZNF430Q9H8G1 570 aaPredicted RBP3.3□□□□□ -1.88
COL8A1-205ENST00000463753 SLC25A19Q9HC21 320 aa3.3□□□□□ -1.88
COL8A1-205ENST00000463753 HRASLSQ9HDD0 168 aa3.3□□□□□ -1.88
COL8A1-205ENST00000463753 GKN1Q9NS71 199 aa3.3□□□□□ -1.88
COL8A1-205ENST00000463753 GTF2A1LQ9UNN4 478 aa3.3□□□□□ -1.88
COL8A1-205ENST00000463753 NEU3Q9UQ49 428 aa3.3□□□□□ -1.88
COL8A1-205ENST00000463753 HIF3AQ9Y2N7 669 aa3.3□□□□□ -1.88
COL8A1-205ENST00000463753 RPL36Q9Y3U8 105 aaKnown RBP3.3□□□□□ -1.88
COL8A1-205ENST00000463753 A0A0B4J2A0 478 aa3.3□□□□□ -1.88
COL8A1-205ENST00000463753 ANKRD20A5PA0PJZ0 165 aa3.3□□□□□ -1.88
COL8A1-205ENST00000463753 ANKUB1A6NFN9 424 aa3.3□□□□□ -1.88
COL8A1-205ENST00000463753 C9JQL5 133 aa3.3□□□□□ -1.88
COL8A1-205ENST00000463753 FAM229AH3BQW9 127 aa3.3□□□□□ -1.88
COL8A1-205ENST00000463753 PGRMC2O15173 223 aa3.3□□□□□ -1.88
COL8A1-205ENST00000463753 MED7O43513 233 aa3.3□□□□□ -1.88
COL8A1-205ENST00000463753 BCL2L11O43521 198 aa3.3□□□□□ -1.88
COL8A1-205ENST00000463753 HCRTO43612 131 aa3.3□□□□□ -1.88
COL8A1-205ENST00000463753 OR2C1O95371 312 aa3.3□□□□□ -1.88
COL8A1-205ENST00000463753 RAB36O95755 333 aa3.3□□□□□ -1.88
COL8A1-205ENST00000463753 TBX6O95947 436 aaPredicted RBP3.3□□□□□ -1.88
COL8A1-205ENST00000463753 OPN1LWP04000 364 aa3.3□□□□□ -1.88
COL8A1-205ENST00000463753 OR4A8P0C604 315 aa3.3□□□□□ -1.88
COL8A1-205ENST00000463753 PGA3P0DJD8 388 aa3.3□□□□□ -1.88
COL8A1-205ENST00000463753 GZMBP10144 247 aa3.3□□□□□ -1.88
COL8A1-205ENST00000463753 UROSP10746 265 aa3.3□□□□□ -1.88
COL8A1-205ENST00000463753 PTHLHP12272 177 aa3.3□□□□□ -1.88
COL8A1-205ENST00000463753 TBPP20226 339 aa3.3□□□□□ -1.88
COL8A1-205ENST00000463753 DTYMKP23919 212 aa3.3□□□□□ -1.88
COL8A1-205ENST00000463753 ITPKBP27987 946 aa3.3□□□□□ -1.88
COL8A1-205ENST00000463753 KDELR2P33947 212 aa3.3□□□□□ -1.88
COL8A1-205ENST00000463753 ACAA2P42765 397 aaKnown RBP3.3□□□□□ -1.88
COL8A1-205ENST00000463753 RAG2P55895 527 aa3.3□□□□□ -1.88
COL8A1-205ENST00000463753 UCP3P55916 312 aa3.3□□□□□ -1.88
COL8A1-205ENST00000463753 WNT3P56703 355 aa3.3□□□□□ -1.88
COL8A1-205ENST00000463753 ACTBP60709 375 aa3.3□□□□□ -1.88
COL8A1-205ENST00000463753 ACTA2P62736 377 aa3.3□□□□□ -1.88
COL8A1-205ENST00000463753 ACTG1P63261 375 aa3.3□□□□□ -1.88
COL8A1-205ENST00000463753 ACTG2P63267 376 aa3.3□□□□□ -1.88
COL8A1-205ENST00000463753 ACTC1P68032 377 aa3.3□□□□□ -1.88
COL8A1-205ENST00000463753 ACTA1P68133 377 aa3.3□□□□□ -1.88
COL8A1-205ENST00000463753 ZXDBP98169 803 aa3.3□□□□□ -1.88
COL8A1-205ENST00000463753 HMGCS1Q01581 520 aa3.3□□□□□ -1.88
COL8A1-205ENST00000463753 PJVKQ0ZLH3 352 aa3.3□□□□□ -1.88
COL8A1-205ENST00000463753 TSPAN31Q12999 210 aa3.3□□□□□ -1.88
COL8A1-205ENST00000463753 CEBPEQ15744 281 aa3.3□□□□□ -1.88
COL8A1-205ENST00000463753 RPE65Q16518 533 aa3.3□□□□□ -1.88
COL8A1-205ENST00000463753 ATP6V1FQ16864 119 aa3.3□□□□□ -1.88
COL8A1-205ENST00000463753 ZNF699Q32M78 642 aa3.3□□□□□ -1.88
COL8A1-205ENST00000463753 LINC00303Q3SY05 128 aa3.3□□□□□ -1.88
COL8A1-205ENST00000463753 LRIF1Q5T3J3 769 aa3.3□□□□□ -1.88
COL8A1-205ENST00000463753 PRAMEF8Q5VWM4 474 aa3.3□□□□□ -1.88
COL8A1-205ENST00000463753 LYPLAL1Q5VWZ2 237 aa3.3□□□□□ -1.88
COL8A1-205ENST00000463753 PRAMEF7Q5VXH5 474 aa3.3□□□□□ -1.88
COL8A1-205ENST00000463753 JMJD6Q6NYC1 403 aaPredicted RBP3.3□□□□□ -1.88
COL8A1-205ENST00000463753 SYT13Q7L8C5 426 aa3.3□□□□□ -1.88
COL8A1-205ENST00000463753 SLC16A14Q7RTX9 510 aa3.3□□□□□ -1.88
COL8A1-205ENST00000463753 CMTM1Q8IZ96 169 aa3.3□□□□□ -1.88
COL8A1-205ENST00000463753 MMP21Q8N119 569 aa3.3□□□□□ -1.88
COL8A1-205ENST00000463753 BEST3Q8N1M1 668 aa3.3□□□□□ -1.88
COL8A1-205ENST00000463753 ARL14Q8N4G2 192 aa3.3□□□□□ -1.88
COL8A1-205ENST00000463753 FRMD1Q8N878 549 aa3.3□□□□□ -1.88
COL8A1-205ENST00000463753 HSD17B11Q8NBQ5 300 aa3.3□□□□□ -1.88
COL8A1-205ENST00000463753 OR52I1Q8NGK6 324 aa3.3□□□□□ -1.88
COL8A1-205ENST00000463753 OR5R1Q8NH85 324 aa3.3□□□□□ -1.88
COL8A1-205ENST00000463753 MRPS31Q92665 395 aaKnown RBP3.3□□□□□ -1.88
COL8A1-205ENST00000463753 CDS1Q92903 461 aa3.3□□□□□ -1.88
COL8A1-205ENST00000463753 MAL2Q969L2 176 aa3.3□□□□□ -1.88
COL8A1-205ENST00000463753 TAAR8Q969N4 342 aa3.3□□□□□ -1.88
COL8A1-205ENST00000463753 SGCZQ96LD1 299 aa3.3□□□□□ -1.88
COL8A1-205ENST00000463753 EPYCQ99645 322 aa3.3□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms