RNA–Protein interactions for RNA: ENST00000463477.5

PTPRD-207, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

TSL 1 (best) BASIC

Gene PTPRD, Length 1,697 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-207ENST00000463477 C12orf10Q9HB07 376 aa8.99□□□□□ -0.97
PTPRD-207ENST00000463477 ERVK-19Q9WJR5 959 aa8.99□□□□□ -0.97
PTPRD-207ENST00000463477 DTX4Q9Y2E6 619 aa8.99□□□□□ -0.97
PTPRD-207ENST00000463477 ZNF337Q9Y3M9 751 aa8.99□□□□□ -0.97
PTPRD-207ENST00000463477 SIRT4Q9Y6E7 314 aaPredicted RBP8.99□□□□□ -0.97
PTPRD-207ENST00000463477 TRAV1-2A0A0B4J238 106 aa8.98□□□□□ -0.97
PTPRD-207ENST00000463477 CD8B2A6NJW9 211 aa8.98□□□□□ -0.97
PTPRD-207ENST00000463477 B8ZZF3 427 aa8.98□□□□□ -0.97
PTPRD-207ENST00000463477 HRKO00198 91 aa8.98□□□□□ -0.97
PTPRD-207ENST00000463477 OGG1O15527 345 aa8.98□□□□□ -0.97
PTPRD-207ENST00000463477 SSX4O60224 188 aa8.98□□□□□ -0.97
PTPRD-207ENST00000463477 TMEM127O75204 238 aa8.98□□□□□ -0.97
PTPRD-207ENST00000463477 OR7A10O76100 309 aa8.98□□□□□ -0.97
PTPRD-207ENST00000463477 SERPINA3P01011 423 aa8.98□□□□□ -0.97
PTPRD-207ENST00000463477 HEXBP07686 556 aa8.98□□□□□ -0.97
PTPRD-207ENST00000463477 CD8BP10966 210 aa8.98□□□□□ -0.97
PTPRD-207ENST00000463477 PNMTP11086 282 aa8.98□□□□□ -0.97
PTPRD-207ENST00000463477 PTNP21246 168 aa8.98□□□□□ -0.97
PTPRD-207ENST00000463477 AZGP1P25311 298 aaKnown RBP8.98□□□□□ -0.97
PTPRD-207ENST00000463477 NOS3P29474 1203 aa8.98□□□□□ -0.97
PTPRD-207ENST00000463477 DDOSTP39656 456 aa8.98□□□□□ -0.97
PTPRD-207ENST00000463477 PPICP45877 212 aa8.98□□□□□ -0.97
PTPRD-207ENST00000463477 PRPS1P60891 318 aa8.98□□□□□ -0.97
PTPRD-207ENST00000463477 RPS7P62081 194 aaKnown RBP8.98□□□□□ -0.97
PTPRD-207ENST00000463477 BTG2P78543 158 aa8.98□□□□□ -0.97
PTPRD-207ENST00000463477 CHAF1BQ13112 559 aa8.98□□□□□ -0.97
PTPRD-207ENST00000463477 AIMP2Q13155 320 aaKnown RBP8.98□□□□□ -0.97
PTPRD-207ENST00000463477 KCNJ8Q15842 424 aa8.98□□□□□ -0.97
PTPRD-207ENST00000463477 PYDC2Q56P42 97 aa8.98□□□□□ -0.97
PTPRD-207ENST00000463477 TMEM205Q6UW68 189 aa8.98□□□□□ -0.97
PTPRD-207ENST00000463477 NCCRP1Q6ZVX7 275 aaPredicted RBP8.98□□□□□ -0.97
PTPRD-207ENST00000463477 SPATC1Q76KD6 591 aa8.98□□□□□ -0.97
PTPRD-207ENST00000463477 TRILQ7L0X0 811 aa8.98□□□□□ -0.97
PTPRD-207ENST00000463477 LRRC28Q86X40 367 aaPredicted RBP8.98□□□□□ -0.97
PTPRD-207ENST00000463477 PRSS58Q8IYP2 241 aa8.98□□□□□ -0.97
PTPRD-207ENST00000463477 SCAIQ8N9R8 606 aa8.98□□□□□ -0.97
PTPRD-207ENST00000463477 ZNF527Q8NB42 609 aa8.98□□□□□ -0.97
PTPRD-207ENST00000463477 DUSP18Q8NEJ0 188 aa8.98□□□□□ -0.97
PTPRD-207ENST00000463477 OR11G2Q8NGC1 345 aa8.98□□□□□ -0.97
PTPRD-207ENST00000463477 OR6F1Q8NGZ6 308 aa8.98□□□□□ -0.97
PTPRD-207ENST00000463477 PHYHIPQ92561 330 aa8.98□□□□□ -0.97
PTPRD-207ENST00000463477 TP53INP1Q96A56 240 aa8.98□□□□□ -0.97
PTPRD-207ENST00000463477 C3orf49Q96BT1 292 aa8.98□□□□□ -0.97
PTPRD-207ENST00000463477 PGLYRP3Q96LB9 341 aa8.98□□□□□ -0.97
PTPRD-207ENST00000463477 ERMAPQ96PL5 475 aaPredicted RBP8.98□□□□□ -0.97
PTPRD-207ENST00000463477 KCNJ15Q99712 375 aa8.98□□□□□ -0.97
PTPRD-207ENST00000463477 NMNAT2Q9BZQ4 307 aa8.98□□□□□ -0.97
PTPRD-207ENST00000463477 C11orf54Q9H0W9 315 aaPredicted RBP8.98□□□□□ -0.97
PTPRD-207ENST00000463477 OR51V1Q9H2C8 321 aa8.98□□□□□ -0.97
PTPRD-207ENST00000463477 RERGLQ9H628 205 aa8.98□□□□□ -0.97
PTPRD-207ENST00000463477 LANCL2Q9NS86 450 aa8.98□□□□□ -0.97
PTPRD-207ENST00000463477 COMMD3Q9UBI1 195 aa8.98□□□□□ -0.97
PTPRD-207ENST00000463477 MKL2Q9ULH7 1088 aa8.98□□□□□ -0.97
PTPRD-207ENST00000463477 SLC6A5Q9Y345 797 aa8.98□□□□□ -0.97
PTPRD-207ENST00000463477 OR10H1Q9Y4A9 318 aa8.98□□□□□ -0.97
PTPRD-207ENST00000463477 NPFFR2Q9Y5X5 522 aa8.98□□□□□ -0.97
PTPRD-207ENST00000463477 FASNP49327 2511 aaKnown RBP8.98□□□□□ -0.97
PTPRD-207ENST00000463477 ZNF462Q96JM2 2506 aa8.97□□□□□ -0.97
PTPRD-207ENST00000463477 LOC102723996A0A087X1L8 192 aa8.97□□□□□ -0.97
PTPRD-207ENST00000463477 C2orf92A0A1B0GVN3 265 aa8.97□□□□□ -0.97
PTPRD-207ENST00000463477 ZC3H12DA2A288 527 aaKnown RBP8.97□□□□□ -0.97
PTPRD-207ENST00000463477 SYNDIG1LA6NDD5 238 aa8.97□□□□□ -0.97
PTPRD-207ENST00000463477 HMX3A6NHT5 357 aa8.97□□□□□ -0.97
PTPRD-207ENST00000463477 IMPA2O14732 288 aa8.97□□□□□ -0.97
PTPRD-207ENST00000463477 PLA2G10O15496 165 aa8.97□□□□□ -0.97
PTPRD-207ENST00000463477 HPGDSO60760 199 aa8.97□□□□□ -0.97
PTPRD-207ENST00000463477 TRIM3O75382 744 aaPredicted RBP8.97□□□□□ -0.97
PTPRD-207ENST00000463477 REM1O75628 298 aa8.97□□□□□ -0.97
PTPRD-207ENST00000463477 CCNKO75909 580 aa8.97□□□□□ -0.97
PTPRD-207ENST00000463477 IL33O95760 270 aa8.97□□□□□ -0.97
PTPRD-207ENST00000463477 SLC2A2P11168 524 aaPredicted RBP8.97□□□□□ -0.97
PTPRD-207ENST00000463477 MYL9P24844 172 aa8.97□□□□□ -0.97
PTPRD-207ENST00000463477 RFX3P48380 749 aa8.97□□□□□ -0.97
PTPRD-207ENST00000463477 DIO1P49895 249 aa8.97□□□□□ -0.97
PTPRD-207ENST00000463477 CAV3P56539 151 aa8.97□□□□□ -0.97
PTPRD-207ENST00000463477 CDONQ4KMG0 1287 aa8.97□□□□□ -0.97
PTPRD-207ENST00000463477 CCDC58Q4VC31 144 aa8.97□□□□□ -0.97
PTPRD-207ENST00000463477 HACD4Q5VWC8 232 aa8.97□□□□□ -0.97
PTPRD-207ENST00000463477 FAAH2Q6GMR7 532 aa8.97□□□□□ -0.97
PTPRD-207ENST00000463477 WBP2NLQ6ICG8 309 aa8.97□□□□□ -0.97
PTPRD-207ENST00000463477 MZT2BQ6NZ67 158 aa8.97□□□□□ -0.97
PTPRD-207ENST00000463477 CADM2Q8N3J6 435 aa8.97□□□□□ -0.97
PTPRD-207ENST00000463477 Q8N402 240 aa8.97□□□□□ -0.97
PTPRD-207ENST00000463477 GALNT16Q8N428 558 aa8.97□□□□□ -0.97
PTPRD-207ENST00000463477 PLPP5Q8NEB5 264 aa8.97□□□□□ -0.97
PTPRD-207ENST00000463477 FDCSPQ8NFU4 85 aa8.97□□□□□ -0.97
PTPRD-207ENST00000463477 OR5M3Q8NGP4 307 aa8.97□□□□□ -0.97
PTPRD-207ENST00000463477 OR14A16Q8NHC5 309 aa8.97□□□□□ -0.97
PTPRD-207ENST00000463477 ABHD4Q8TB40 342 aa8.97□□□□□ -0.97
PTPRD-207ENST00000463477 RPS4Y2Q8TD47 263 aa8.97□□□□□ -0.97
PTPRD-207ENST00000463477 HAVCR2Q8TDQ0 301 aa8.97□□□□□ -0.97
PTPRD-207ENST00000463477 SENP5Q96HI0 755 aaPredicted RBP8.97□□□□□ -0.97
PTPRD-207ENST00000463477 C4orf36Q96KX1 117 aa8.97□□□□□ -0.97
PTPRD-207ENST00000463477 NEDD4LQ96PU5 975 aa8.97□□□□□ -0.97
PTPRD-207ENST00000463477 CNN2Q99439 309 aaKnown RBP8.97□□□□□ -0.97
PTPRD-207ENST00000463477 SMAD5Q99717 465 aaKnown RBP8.97□□□□□ -0.97
PTPRD-207ENST00000463477 RBCK1Q9BYM8 510 aa8.97□□□□□ -0.97
PTPRD-207ENST00000463477 VN1R1Q9GZP7 353 aa8.97□□□□□ -0.97
PTPRD-207ENST00000463477 ZCCHC4Q9H5U6 513 aa8.97□□□□□ -0.97
PTPRD-207ENST00000463477 NRIP3Q9NQ35 241 aa8.97□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms