RNA–Protein interactions for RNA: ENST00000463440.1

COL1A1-202, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 2

Gene COL1A1, Length 614 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-202ENST00000463440 B3GAT2Q9NPZ5 323 aa14.21□□□□□ -0.13
COL1A1-202ENST00000463440 ZNF701Q9NV72 531 aaPredicted RBP14.21□□□□□ -0.13
COL1A1-202ENST00000463440 RIMS3Q9UJD0 308 aa14.21□□□□□ -0.13
COL1A1-202ENST00000463440 ZNF229Q9UJW7 825 aa14.21□□□□□ -0.13
COL1A1-202ENST00000463440 ZNF726A6NNF4 738 aa14.2□□□□□ -0.14
COL1A1-202ENST00000463440 C11orf98E9PRG8 122 aa14.2□□□□□ -0.14
COL1A1-202ENST00000463440 SHOX2O60902 331 aaPredicted RBP14.2□□□□□ -0.14
COL1A1-202ENST00000463440 THRBP10828 461 aa14.2□□□□□ -0.14
COL1A1-202ENST00000463440 UMPSP11172 480 aa14.2□□□□□ -0.14
COL1A1-202ENST00000463440 PRDX6P30041 224 aa14.2□□□□□ -0.14
COL1A1-202ENST00000463440 IFNA8P32881 189 aa14.2□□□□□ -0.14
COL1A1-202ENST00000463440 RBM34P42696 430 aaKnown RBP14.2□□□□□ -0.14
COL1A1-202ENST00000463440 GNGT1P63211 74 aa14.2□□□□□ -0.14
COL1A1-202ENST00000463440 PGGHGQ32M88 737 aa14.2□□□□□ -0.14
COL1A1-202ENST00000463440 CARD17Q5XLA6 110 aa14.2□□□□□ -0.14
COL1A1-202ENST00000463440 C8orf82Q6P1X6 216 aaPredicted RBP14.2□□□□□ -0.14
COL1A1-202ENST00000463440 GTPBP3Q969Y2 492 aaKnown RBP14.2□□□□□ -0.14
COL1A1-202ENST00000463440 TRMT61AQ96FX7 289 aaKnown RBP14.2□□□□□ -0.14
COL1A1-202ENST00000463440 TXNDC15Q96J42 360 aa14.2□□□□□ -0.14
COL1A1-202ENST00000463440 LRR1Q96L50 414 aa14.2□□□□□ -0.14
COL1A1-202ENST00000463440 PRSS27Q9BQR3 290 aa14.2□□□□□ -0.14
COL1A1-202ENST00000463440 EMC6Q9BV81 110 aa14.2□□□□□ -0.14
COL1A1-202ENST00000463440 CRLF2Q9HC73 371 aa14.2□□□□□ -0.14
COL1A1-202ENST00000463440 MOV10Q9HCE1 1003 aaKnown RBP14.2□□□□□ -0.14
COL1A1-202ENST00000463440 DLL4Q9NR61 685 aa14.2□□□□□ -0.14
COL1A1-202ENST00000463440 MED29Q9NX70 200 aa14.2□□□□□ -0.14
COL1A1-202ENST00000463440 A0A096LPE4 126 aa14.19□□□□□ -0.14
COL1A1-202ENST00000463440 ARPC4-TTLL3A0A0A6YYG9 625 aa14.19□□□□□ -0.14
COL1A1-202ENST00000463440 A0A1W2PPZ6 126 aa14.19□□□□□ -0.14
COL1A1-202ENST00000463440 SLC35F4A4IF30 521 aa14.19□□□□□ -0.14
COL1A1-202ENST00000463440 M0R3G1 203 aa14.19□□□□□ -0.14
COL1A1-202ENST00000463440 CXCR6O00574 342 aa14.19□□□□□ -0.14
COL1A1-202ENST00000463440 NME4O00746 187 aa14.19□□□□□ -0.14
COL1A1-202ENST00000463440 SERPINI2O75830 405 aa14.19□□□□□ -0.14
COL1A1-202ENST00000463440 ATP5J2P56134 94 aa14.19□□□□□ -0.14
COL1A1-202ENST00000463440 ARF1P84077 181 aaKnown RBP14.19□□□□□ -0.14
COL1A1-202ENST00000463440 SPOCK1Q08629 439 aa14.19□□□□□ -0.14
COL1A1-202ENST00000463440 ZP4Q12836 540 aa14.19□□□□□ -0.14
COL1A1-202ENST00000463440 PIN1Q13526 163 aaPredicted RBP14.19□□□□□ -0.14
COL1A1-202ENST00000463440 CEACAM16Q2WEN9 425 aa14.19□□□□□ -0.14
COL1A1-202ENST00000463440 AGAP6Q5VW22 663 aa14.19□□□□□ -0.14
COL1A1-202ENST00000463440 NKAIN4Q8IVV8 208 aa14.19□□□□□ -0.14
COL1A1-202ENST00000463440 C20orf196Q8IYI0 205 aa14.19□□□□□ -0.14
COL1A1-202ENST00000463440 OR6N1Q8NGY5 312 aa14.19□□□□□ -0.14
COL1A1-202ENST00000463440 HS6ST2Q96MM7 605 aa14.19□□□□□ -0.14
COL1A1-202ENST00000463440 DHRS9Q9BPW9 319 aa14.19□□□□□ -0.14
COL1A1-202ENST00000463440 GMPR2Q9P2T1 348 aaKnown RBP14.19□□□□□ -0.14
COL1A1-202ENST00000463440 USF3Q68DE3 2245 aa14.19□□□□□ -0.14
COL1A1-202ENST00000463440 E7EQL1 145 aa14.18□□□□□ -0.14
COL1A1-202ENST00000463440 OVOL3O00110 214 aa14.18□□□□□ -0.14
COL1A1-202ENST00000463440 RNF13O43567 381 aa14.18□□□□□ -0.14
COL1A1-202ENST00000463440 ZNF682O95780 498 aa14.18□□□□□ -0.14
COL1A1-202ENST00000463440 MT-ND1P03886 318 aa14.18□□□□□ -0.14
COL1A1-202ENST00000463440 IFNGR1P15260 489 aa14.18□□□□□ -0.14
COL1A1-202ENST00000463440 GSK3BP49841 420 aa14.18□□□□□ -0.14
COL1A1-202ENST00000463440 GYS2P54840 703 aa14.18□□□□□ -0.14
COL1A1-202ENST00000463440 PSME3P61289 254 aa14.18□□□□□ -0.14
COL1A1-202ENST00000463440 ST3GAL3Q11203 375 aa14.18□□□□□ -0.14
COL1A1-202ENST00000463440 NHLRC1Q6VVB1 395 aa14.18□□□□□ -0.14
COL1A1-202ENST00000463440 NANOGNBQ7Z5D8 188 aa14.18□□□□□ -0.14
COL1A1-202ENST00000463440 DTX2Q86UW9 622 aa14.18□□□□□ -0.14
COL1A1-202ENST00000463440 CCDC36Q8IYA8 594 aa14.18□□□□□ -0.14
COL1A1-202ENST00000463440 LRRC17Q8N6Y2 441 aa14.18□□□□□ -0.14
COL1A1-202ENST00000463440 TMEM255BQ8WV15 326 aa14.18□□□□□ -0.14
COL1A1-202ENST00000463440 TMEM239Q8WW34 195 aa14.18□□□□□ -0.14
COL1A1-202ENST00000463440 C18orf12Q96KH6 178 aa14.18□□□□□ -0.14
COL1A1-202ENST00000463440 PRRC1Q96M27 445 aa14.18□□□□□ -0.14
COL1A1-202ENST00000463440 ADAD1Q96M93 576 aaKnown RBP14.18□□□□□ -0.14
COL1A1-202ENST00000463440 Q96MF0 132 aa14.18□□□□□ -0.14
COL1A1-202ENST00000463440 KCTD14Q9BQ13 255 aaPredicted RBP14.18□□□□□ -0.14
COL1A1-202ENST00000463440 KCNS3Q9BQ31 491 aa14.18□□□□□ -0.14
COL1A1-202ENST00000463440 TRAF4Q9BUZ4 470 aaPredicted RBP14.18□□□□□ -0.14
COL1A1-202ENST00000463440 GRIP2Q9C0E4 1043 aa14.18□□□□□ -0.14
COL1A1-202ENST00000463440 MEPEQ9NQ76 525 aaPredicted RBP14.18□□□□□ -0.14
COL1A1-202ENST00000463440 TAS2R5Q9NYW4 299 aa14.18□□□□□ -0.14
COL1A1-202ENST00000463440 MED31Q9Y3C7 131 aa14.18□□□□□ -0.14
COL1A1-202ENST00000463440 ATP23Q9Y6H3 246 aa14.18□□□□□ -0.14
COL1A1-202ENST00000463440 HEATR1Q9H583 2144 aaKnown RBP14.18□□□□□ -0.14
COL1A1-202ENST00000463440 ACANP16112 2415 aa14.17□□□□□ -0.14
COL1A1-202ENST00000463440 FLNAP21333 2647 aaKnown RBP14.17□□□□□ -0.14
COL1A1-202ENST00000463440 ZNF99A8MXY4 864 aaPredicted RBP14.17□□□□□ -0.14
COL1A1-202ENST00000463440 IGF2P01344 180 aa14.17□□□□□ -0.14
COL1A1-202ENST00000463440 IFNW1P05000 195 aa14.17□□□□□ -0.14
COL1A1-202ENST00000463440 ASAH2BP0C7U1 165 aa14.17□□□□□ -0.14
COL1A1-202ENST00000463440 FABP6P51161 128 aa14.17□□□□□ -0.14
COL1A1-202ENST00000463440 UGT2B15P54855 530 aa14.17□□□□□ -0.14
COL1A1-202ENST00000463440 BIDP55957 195 aa14.17□□□□□ -0.14
COL1A1-202ENST00000463440 CAMK2DQ13557 499 aa14.17□□□□□ -0.14
COL1A1-202ENST00000463440 PHYHD1Q5SRE7 291 aa14.17□□□□□ -0.14
COL1A1-202ENST00000463440 ZNF544Q6NX49 715 aa14.17□□□□□ -0.14
COL1A1-202ENST00000463440 SLC35D2Q76EJ3 337 aa14.17□□□□□ -0.14
COL1A1-202ENST00000463440 SLC46A3Q7Z3Q1 461 aa14.17□□□□□ -0.14
COL1A1-202ENST00000463440 FBXL14Q8N1E6 418 aa14.17□□□□□ -0.14
COL1A1-202ENST00000463440 OR6X1Q8NH79 312 aa14.17□□□□□ -0.14
COL1A1-202ENST00000463440 PFN4Q8NHR9 129 aa14.17□□□□□ -0.14
COL1A1-202ENST00000463440 GEMIN6Q8WXD5 167 aaKnown RBP14.17□□□□□ -0.14
COL1A1-202ENST00000463440 SGTBQ96EQ0 304 aa14.17□□□□□ -0.14
COL1A1-202ENST00000463440 SLC38A2Q96QD8 506 aa14.17□□□□□ -0.14
COL1A1-202ENST00000463440 BDH2Q9BUT1 245 aa14.17□□□□□ -0.14
COL1A1-202ENST00000463440 ULBP2Q9BZM5 246 aa14.17□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms