RNA–Protein interactions for RNA: ENST00000462236.1

COPS3-204, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 5

Gene COPS3, Length 551 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-204ENST00000462236 OR6C76A6NM76 312 aa4.14□□□□□ -1.75
COPS3-204ENST00000462236 ERI3O43414 337 aaKnown RBP4.14□□□□□ -1.75
COPS3-204ENST00000462236 TRAPPC6AO75865 159 aa4.14□□□□□ -1.75
COPS3-204ENST00000462236 AIFM1O95831 613 aa4.14□□□□□ -1.75
COPS3-204ENST00000462236 CRYAAP02489 173 aa4.14□□□□□ -1.75
COPS3-204ENST00000462236 IFNA16P05015 189 aa4.14□□□□□ -1.75
COPS3-204ENST00000462236 SERPIND1P05546 499 aa4.14□□□□□ -1.75
COPS3-204ENST00000462236 RHOXF2BP0C7M4 288 aa4.14□□□□□ -1.75
COPS3-204ENST00000462236 ETS1P14921 441 aa4.14□□□□□ -1.75
COPS3-204ENST00000462236 CPT2P23786 658 aa4.14□□□□□ -1.75
COPS3-204ENST00000462236 EEF1B2P24534 225 aaKnown RBP4.14□□□□□ -1.75
COPS3-204ENST00000462236 CDKN1AP38936 164 aa4.14□□□□□ -1.75
COPS3-204ENST00000462236 AP1S2P56377 157 aa4.14□□□□□ -1.75
COPS3-204ENST00000462236 RWDD2BP57060 319 aa4.14□□□□□ -1.75
COPS3-204ENST00000462236 FBXW4P57775 412 aa4.14□□□□□ -1.75
COPS3-204ENST00000462236 B3GALT5-AS1P59052 145 aa4.14□□□□□ -1.75
COPS3-204ENST00000462236 BIKQ13323 160 aa4.14□□□□□ -1.75
COPS3-204ENST00000462236 BCL2A1Q16548 175 aa4.14□□□□□ -1.75
COPS3-204ENST00000462236 NCMAPQ5T1S8 102 aa4.14□□□□□ -1.75
COPS3-204ENST00000462236 C11orf71Q6IPW1 123 aa4.14□□□□□ -1.75
COPS3-204ENST00000462236 PRR27Q6MZM9 219 aa4.14□□□□□ -1.75
COPS3-204ENST00000462236 NEPROQ6NW34 567 aa4.14□□□□□ -1.75
COPS3-204ENST00000462236 CASC4Q6P4E1 433 aa4.14□□□□□ -1.75
COPS3-204ENST00000462236 ENPP6Q6UWR7 440 aa4.14□□□□□ -1.75
COPS3-204ENST00000462236 STAC2Q6ZMT1 411 aa4.14□□□□□ -1.75
COPS3-204ENST00000462236 PRUNE1Q86TP1 453 aa4.14□□□□□ -1.75
COPS3-204ENST00000462236 YRDCQ86U90 279 aaKnown RBP4.14□□□□□ -1.75
COPS3-204ENST00000462236 TBC1D19Q8N5T2 526 aa4.14□□□□□ -1.75
COPS3-204ENST00000462236 WDSUB1Q8N9V3 476 aa4.14□□□□□ -1.75
COPS3-204ENST00000462236 TTLQ8NG68 377 aa4.14□□□□□ -1.75
COPS3-204ENST00000462236 OR2L5Q8NG80 312 aa4.14□□□□□ -1.75
COPS3-204ENST00000462236 RAB3IL1Q8TBN0 382 aa4.14□□□□□ -1.75
COPS3-204ENST00000462236 RNF128Q8TEB7 428 aa4.14□□□□□ -1.75
COPS3-204ENST00000462236 ZNF473Q8WTR7 871 aaKnown RBP4.14□□□□□ -1.75
COPS3-204ENST00000462236 CCDC107Q8WV48 283 aa4.14□□□□□ -1.75
COPS3-204ENST00000462236 ZFAND2BQ8WV99 257 aa4.14□□□□□ -1.75
COPS3-204ENST00000462236 EEF1AKMT1Q8WVE0 214 aa4.14□□□□□ -1.75
COPS3-204ENST00000462236 HGDQ93099 445 aa4.14□□□□□ -1.75
COPS3-204ENST00000462236 ZMYND19Q96E35 227 aaPredicted RBP4.14□□□□□ -1.75
COPS3-204ENST00000462236 JSRP1Q96MG2 331 aaPredicted RBP4.14□□□□□ -1.75
COPS3-204ENST00000462236 FAM111AQ96PZ2 611 aa4.14□□□□□ -1.75
COPS3-204ENST00000462236 EGFL8Q99944 293 aa4.14□□□□□ -1.75
COPS3-204ENST00000462236 MAPKAP1Q9BPZ7 522 aa4.14□□□□□ -1.75
COPS3-204ENST00000462236 AIF1LQ9BQI0 150 aa4.14□□□□□ -1.75
COPS3-204ENST00000462236 FNDC11Q9BVV2 318 aa4.14□□□□□ -1.75
COPS3-204ENST00000462236 RNF122Q9H9V4 155 aa4.14□□□□□ -1.75
COPS3-204ENST00000462236 HOMER3Q9NSC5 361 aa4.14□□□□□ -1.75
COPS3-204ENST00000462236 COPS7AQ9UBW8 275 aa4.14□□□□□ -1.75
COPS3-204ENST00000462236 PTBP2Q9UKA9 531 aaKnown RBP4.14□□□□□ -1.75
COPS3-204ENST00000462236 LIPT1Q9Y234 373 aa4.14□□□□□ -1.75
COPS3-204ENST00000462236 GOLGA8QA0A0J9YX86 632 aa4.13□□□□□ -1.75
COPS3-204ENST00000462236 A0A1W2PN81 502 aa4.13□□□□□ -1.75
COPS3-204ENST00000462236 A0A1W2PPQ1 181 aa4.13□□□□□ -1.75
COPS3-204ENST00000462236 A0A1W2PRB8 838 aa4.13□□□□□ -1.75
COPS3-204ENST00000462236 GOLGA8OA6NCC3 632 aa4.13□□□□□ -1.75
COPS3-204ENST00000462236 GOLGA8NF8WBI6 632 aa4.13□□□□□ -1.75
COPS3-204ENST00000462236 GOLGA8RI6L899 631 aa4.13□□□□□ -1.75
COPS3-204ENST00000462236 P2RY10O00398 339 aa4.13□□□□□ -1.75
COPS3-204ENST00000462236 TP53I11O14683 189 aa4.13□□□□□ -1.75
COPS3-204ENST00000462236 PFDN6O15212 129 aa4.13□□□□□ -1.75
COPS3-204ENST00000462236 CDH16O75309 829 aa4.13□□□□□ -1.75
COPS3-204ENST00000462236 APRTP07741 180 aa4.13□□□□□ -1.75
COPS3-204ENST00000462236 QDPRP09417 244 aa4.13□□□□□ -1.75
COPS3-204ENST00000462236 SLC25A16P16260 332 aa4.13□□□□□ -1.75
COPS3-204ENST00000462236 PSMB1P20618 241 aaKnown RBP4.13□□□□□ -1.75
COPS3-204ENST00000462236 CHRNA7P36544 502 aa4.13□□□□□ -1.75
COPS3-204ENST00000462236 SLC1A2P43004 574 aa4.13□□□□□ -1.75
COPS3-204ENST00000462236 STARP49675 285 aa4.13□□□□□ -1.75
COPS3-204ENST00000462236 PPP5CP53041 499 aa4.13□□□□□ -1.75
COPS3-204ENST00000462236 STX4Q12846 297 aa4.13□□□□□ -1.75
COPS3-204ENST00000462236 RCN2Q14257 317 aa4.13□□□□□ -1.75
COPS3-204ENST00000462236 NRF1Q16656 503 aa4.13□□□□□ -1.75
COPS3-204ENST00000462236 PPP1R3AQ16821 1122 aa4.13□□□□□ -1.75
COPS3-204ENST00000462236 FAM120AOSQ5T036 256 aa4.13□□□□□ -1.75
COPS3-204ENST00000462236 LIPNQ5VXI9 398 aa4.13□□□□□ -1.75
COPS3-204ENST00000462236 CYB5R2Q6BCY4 276 aa4.13□□□□□ -1.75
COPS3-204ENST00000462236 OR2A2Q6IF42 318 aa4.13□□□□□ -1.75
COPS3-204ENST00000462236 C12orf54Q6X4T0 127 aa4.13□□□□□ -1.75
COPS3-204ENST00000462236 TMEM64Q6YI46 380 aa4.13□□□□□ -1.75
COPS3-204ENST00000462236 TMPRSS11FQ6ZWK6 438 aa4.13□□□□□ -1.75
COPS3-204ENST00000462236 CENPVQ7Z7K6 275 aaPredicted RBP4.13□□□□□ -1.75
COPS3-204ENST00000462236 SMIM29Q86T20 159 aa4.13□□□□□ -1.75
COPS3-204ENST00000462236 TMPRSS11BQ86T26 416 aa4.13□□□□□ -1.75
COPS3-204ENST00000462236 COMMD2Q86X83 199 aa4.13□□□□□ -1.75
COPS3-204ENST00000462236 GRAMD2AQ8IUY3 354 aa4.13□□□□□ -1.75
COPS3-204ENST00000462236 ST13P4Q8IZP2 240 aaPredicted RBP4.13□□□□□ -1.75
COPS3-204ENST00000462236 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP4.13□□□□□ -1.75
COPS3-204ENST00000462236 ZNF615Q8N8J6 731 aa4.13□□□□□ -1.75
COPS3-204ENST00000462236 C17orf47Q8NEP4 570 aa4.13□□□□□ -1.75
COPS3-204ENST00000462236 SLC24A4Q8NFF2 622 aa4.13□□□□□ -1.75
COPS3-204ENST00000462236 OR1J4Q8NGS1 313 aa4.13□□□□□ -1.75
COPS3-204ENST00000462236 SMAP2Q8WU79 429 aaPredicted RBP4.13□□□□□ -1.75
COPS3-204ENST00000462236 SPDL1Q96EA4 605 aa4.13□□□□□ -1.75
COPS3-204ENST00000462236 RADILQ96JH8 1075 aa4.13□□□□□ -1.75
COPS3-204ENST00000462236 CCDC42Q96M95 316 aa4.13□□□□□ -1.75
COPS3-204ENST00000462236 SFXN2Q96NB2 322 aa4.13□□□□□ -1.75
COPS3-204ENST00000462236 RUNDC3BQ96NL0 473 aa4.13□□□□□ -1.75
COPS3-204ENST00000462236 HBEGFQ99075 208 aa4.13□□□□□ -1.75
COPS3-204ENST00000462236 SLC39A3Q9BRY0 314 aa4.13□□□□□ -1.75
COPS3-204ENST00000462236 RHNO1Q9BSD3 238 aa4.13□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms