RNA–Protein interactions for RNA: ENST00000460366.5

VPS45-204, Transcript of vacuolar protein sorting 45 homolog, humanhuman

TSL 2

Gene VPS45, Length 636 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS45-204ENST00000460366 NPIPB4C9JG80 1138 aa8.8□□□□□ -1
VPS45-204ENST00000460366 HNRNPRO43390 633 aaKnown RBP8.8□□□□□ -1
VPS45-204ENST00000460366 KLF4O43474 513 aa8.8□□□□□ -1
VPS45-204ENST00000460366 AKAP8O43823 692 aaKnown RBP8.8□□□□□ -1
VPS45-204ENST00000460366 PIP5K1CO60331 668 aa8.8□□□□□ -1
VPS45-204ENST00000460366 MRPL33O75394 65 aaKnown RBP8.8□□□□□ -1
VPS45-204ENST00000460366 DEAF1O75398 565 aaPredicted RBP8.8□□□□□ -1
VPS45-204ENST00000460366 SMNDC1O75940 238 aaKnown RBP eCLIP8.8□□□□□ -1
VPS45-204ENST00000460366 CCNB2O95067 398 aa8.8□□□□□ -1
VPS45-204ENST00000460366 ADORA3P0DMS8 318 aa8.8□□□□□ -1
VPS45-204ENST00000460366 MAKP20794 623 aa8.8□□□□□ -1
VPS45-204ENST00000460366 FPR3P25089 353 aa8.8□□□□□ -1
VPS45-204ENST00000460366 DNAJA1P31689 397 aaKnown RBP8.8□□□□□ -1
VPS45-204ENST00000460366 UQCRC1P31930 480 aa8.8□□□□□ -1
VPS45-204ENST00000460366 PRPS1P60891 318 aa8.8□□□□□ -1
VPS45-204ENST00000460366 RPS4XP62701 263 aaKnown RBP8.8□□□□□ -1
VPS45-204ENST00000460366 KPNB1Q14974 876 aaKnown RBP8.8□□□□□ -1
VPS45-204ENST00000460366 TAF11Q15544 211 aa8.8□□□□□ -1
VPS45-204ENST00000460366 MICAQ29983 383 aa8.8□□□□□ -1
VPS45-204ENST00000460366 C1orf94Q6P1W5 598 aa8.8□□□□□ -1
VPS45-204ENST00000460366 TFAP2EQ6VUC0 442 aa8.8□□□□□ -1
VPS45-204ENST00000460366 BEND4Q6ZU67 534 aa8.8□□□□□ -1
VPS45-204ENST00000460366 NANOGNBQ7Z5D8 188 aa8.8□□□□□ -1
VPS45-204ENST00000460366 ZER1Q7Z7L7 766 aa8.8□□□□□ -1
VPS45-204ENST00000460366 OAFQ86UD1 273 aa8.8□□□□□ -1
VPS45-204ENST00000460366 GPAT4Q86UL3 456 aa8.8□□□□□ -1
VPS45-204ENST00000460366 ZNF100Q8IYN0 542 aa8.8□□□□□ -1
VPS45-204ENST00000460366 ZNF610Q8N9Z0 462 aa8.8□□□□□ -1
VPS45-204ENST00000460366 GNPDA2Q8TDQ7 276 aa8.8□□□□□ -1
VPS45-204ENST00000460366 NRBF2Q96F24 287 aa8.8□□□□□ -1
VPS45-204ENST00000460366 UCK2Q9BZX2 261 aa8.8□□□□□ -1
VPS45-204ENST00000460366 NDEL1Q9GZM8 345 aa8.8□□□□□ -1
VPS45-204ENST00000460366 SEC14L4Q9UDX3 406 aa8.8□□□□□ -1
VPS45-204ENST00000460366 HIF3AQ9Y2N7 669 aa8.8□□□□□ -1
VPS45-204ENST00000460366 USP9XQ93008 2570 aaPredicted RBP8.8□□□□□ -1
VPS45-204ENST00000460366 FAM90A27PA6NNH2 459 aa8.79□□□□□ -1
VPS45-204ENST00000460366 EEF1E1-BLOC1S5C9J1V9 151 aa8.79□□□□□ -1
VPS45-204ENST00000460366 BLOC1S5-TXNDC5H3BN57 136 aa8.79□□□□□ -1
VPS45-204ENST00000460366 GNGT2O14610 69 aa8.79□□□□□ -1
VPS45-204ENST00000460366 CLOCKO15516 846 aa8.79□□□□□ -1
VPS45-204ENST00000460366 EEF1E1O43324 174 aaKnown RBP8.79□□□□□ -1
VPS45-204ENST00000460366 TRAF3IP2O43734 574 aaPredicted RBP8.79□□□□□ -1
VPS45-204ENST00000460366 OR10H3O60404 316 aa8.79□□□□□ -1
VPS45-204ENST00000460366 PTP4A3O75365 173 aa8.79□□□□□ -1
VPS45-204ENST00000460366 ZNF432O94892 652 aa8.79□□□□□ -1
VPS45-204ENST00000460366 HPRP00739 348 aa8.79□□□□□ -1
VPS45-204ENST00000460366 SAGP10523 405 aaPredicted RBP8.79□□□□□ -1
VPS45-204ENST00000460366 AHCYP23526 432 aa8.79□□□□□ -1
VPS45-204ENST00000460366 FASP25445 335 aa8.79□□□□□ -1
VPS45-204ENST00000460366 NTF4P34130 210 aa8.79□□□□□ -1
VPS45-204ENST00000460366 AQP2P41181 271 aa8.79□□□□□ -1
VPS45-204ENST00000460366 GSSP48637 474 aa8.79□□□□□ -1
VPS45-204ENST00000460366 SORDQ00796 357 aa8.79□□□□□ -1
VPS45-204ENST00000460366 FHL1Q13642 323 aa8.79□□□□□ -1
VPS45-204ENST00000460366 P2RY6Q15077 328 aa8.79□□□□□ -1
VPS45-204ENST00000460366 ATP6AP1Q15904 470 aa8.79□□□□□ -1
VPS45-204ENST00000460366 EXOC3L2Q2M3D2 409 aa8.79□□□□□ -1
VPS45-204ENST00000460366 ZBED5Q49AG3 693 aa8.79□□□□□ -1
VPS45-204ENST00000460366 FBXW9Q5XUX1 488 aa8.79□□□□□ -1
VPS45-204ENST00000460366 ZNF770Q6IQ21 691 aaPredicted RBP8.79□□□□□ -1
VPS45-204ENST00000460366 ZNF474Q6S9Z5 364 aaPredicted RBP8.79□□□□□ -1
VPS45-204ENST00000460366 AAED1Q7RTV5 226 aa8.79□□□□□ -1
VPS45-204ENST00000460366 LSRQ86X29 649 aaPredicted RBP8.79□□□□□ -1
VPS45-204ENST00000460366 KIF18BQ86Y91 864 aa8.79□□□□□ -1
VPS45-204ENST00000460366 KDM8Q8N371 416 aa8.79□□□□□ -1
VPS45-204ENST00000460366 LRRC75AQ8NAA5 344 aa8.79□□□□□ -1
VPS45-204ENST00000460366 POMGNT2Q8NAT1 580 aa8.79□□□□□ -1
VPS45-204ENST00000460366 ACBD4Q8NC06 268 aa8.79□□□□□ -1
VPS45-204ENST00000460366 APH1AQ96BI3 265 aa8.79□□□□□ -1
VPS45-204ENST00000460366 LRR1Q96L50 414 aa8.79□□□□□ -1
VPS45-204ENST00000460366 ADAD1Q96M93 576 aaKnown RBP8.79□□□□□ -1
VPS45-204ENST00000460366 ZNF385AQ96PM9 386 aaKnown RBP8.79□□□□□ -1
VPS45-204ENST00000460366 TNFRSF13CQ96RJ3 184 aa8.79□□□□□ -1
VPS45-204ENST00000460366 BDH2Q9BUT1 245 aa8.79□□□□□ -1
VPS45-204ENST00000460366 RBM24Q9BX46 236 aaKnown RBP8.79□□□□□ -1
VPS45-204ENST00000460366 HDHD5Q9BXW7 423 aa8.79□□□□□ -1
VPS45-204ENST00000460366 LINC00470Q9BZP3 86 aa8.79□□□□□ -1
VPS45-204ENST00000460366 OPN3Q9H1Y3 402 aaPredicted RBP8.79□□□□□ -1
VPS45-204ENST00000460366 OR10A4Q9H209 315 aa8.79□□□□□ -1
VPS45-204ENST00000460366 DENND2DQ9H6A0 471 aaPredicted RBP8.79□□□□□ -1
VPS45-204ENST00000460366 C12orf49Q9H741 205 aa8.79□□□□□ -1
VPS45-204ENST00000460366 INIPQ9NRY2 104 aa8.79□□□□□ -1
VPS45-204ENST00000460366 VNN3Q9NY84 501 aa8.79□□□□□ -1
VPS45-204ENST00000460366 STX18Q9P2W9 335 aaKnown RBP8.79□□□□□ -1
VPS45-204ENST00000460366 SIGLEC7Q9Y286 467 aa8.79□□□□□ -1
VPS45-204ENST00000460366 ELOA3CA0A087WX78 387 aaPredicted RBP8.78□□□□□ -1
VPS45-204ENST00000460366 A0A1W2PRG6 482 aa8.78□□□□□ -1
VPS45-204ENST00000460366 NKX2-6A6NCS4 301 aa8.78□□□□□ -1
VPS45-204ENST00000460366 UNC119BA6NIH7 251 aa8.78□□□□□ -1
VPS45-204ENST00000460366 ZNF726A6NNF4 738 aa8.78□□□□□ -1
VPS45-204ENST00000460366 CENPBD1B2RD01 187 aa8.78□□□□□ -1
VPS45-204ENST00000460366 CDC42EP2O14613 210 aa8.78□□□□□ -1
VPS45-204ENST00000460366 RNF13O43567 381 aa8.78□□□□□ -1
VPS45-204ENST00000460366 TIPRLO75663 272 aa8.78□□□□□ -1
VPS45-204ENST00000460366 CLDN1O95832 211 aa8.78□□□□□ -1
VPS45-204ENST00000460366 HLA-DOBP13765 273 aa8.78□□□□□ -1
VPS45-204ENST00000460366 CD79BP40259 229 aa8.78□□□□□ -1
VPS45-204ENST00000460366 GPR4P46093 362 aa8.78□□□□□ -1
VPS45-204ENST00000460366 ERFP50548 548 aa8.78□□□□□ -1
VPS45-204ENST00000460366 DAP3P51398 398 aaKnown RBP8.78□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms