RNA–Protein interactions for RNA: ENST00000456385.5

CLIP4-208, Transcript of CAP-Gly domain containing linker protein family member 4, humanhuman

TSL 2

Gene CLIP4, Length 2,311 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP4-208ENST00000456385 CSF1P09603 554 aa9.42□□□□□ -0.9
CLIP4-208ENST00000456385 AKAIN1P0CW23 69 aa9.42□□□□□ -0.9
CLIP4-208ENST00000456385 LIPCP11150 499 aa9.42□□□□□ -0.9
CLIP4-208ENST00000456385 SLC6A6P31641 620 aa9.42□□□□□ -0.9
CLIP4-208ENST00000456385 CD96P40200 585 aa9.42□□□□□ -0.9
CLIP4-208ENST00000456385 BTN3A2P78410 334 aa9.42□□□□□ -0.9
CLIP4-208ENST00000456385 DCDP81605 110 aaKnown RBP9.42□□□□□ -0.9
CLIP4-208ENST00000456385 CAP1Q01518 475 aa9.42□□□□□ -0.9
CLIP4-208ENST00000456385 ID2Q02363 134 aa9.42□□□□□ -0.9
CLIP4-208ENST00000456385 TEAD2Q15562 447 aa9.42□□□□□ -0.9
CLIP4-208ENST00000456385 DEFB115Q30KQ5 88 aa9.42□□□□□ -0.9
CLIP4-208ENST00000456385 GLT8D1Q68CQ7 371 aa9.42□□□□□ -0.9
CLIP4-208ENST00000456385 DHRS7BQ6IAN0 325 aaPredicted RBP9.42□□□□□ -0.9
CLIP4-208ENST00000456385 RAB12Q6IQ22 244 aa9.42□□□□□ -0.9
CLIP4-208ENST00000456385 H3F3CQ6NXT2 135 aa9.42□□□□□ -0.9
CLIP4-208ENST00000456385 RBMS3Q6XE24 437 aaKnown RBP9.42□□□□□ -0.9
CLIP4-208ENST00000456385 LRRTM1Q86UE6 522 aa9.42□□□□□ -0.9
CLIP4-208ENST00000456385 OR51A4Q8NGJ6 313 aa9.42□□□□□ -0.9
CLIP4-208ENST00000456385 OR10AC1Q8NH08 325 aa9.42□□□□□ -0.9
CLIP4-208ENST00000456385 PHYHIPQ92561 330 aa9.42□□□□□ -0.9
CLIP4-208ENST00000456385 FGF13Q92913 245 aa9.42□□□□□ -0.9
CLIP4-208ENST00000456385 HCFC1R1Q9NWW0 138 aa9.42□□□□□ -0.9
CLIP4-208ENST00000456385 FLRT3Q9NZU0 649 aa9.42□□□□□ -0.9
CLIP4-208ENST00000456385 CHRNA9Q9UGM1 479 aa9.42□□□□□ -0.9
CLIP4-208ENST00000456385 SERTAD3Q9UJW9 196 aa9.42□□□□□ -0.9
CLIP4-208ENST00000456385 MKL2Q9ULH7 1088 aa9.42□□□□□ -0.9
CLIP4-208ENST00000456385 TBC1D3KA0A087X1G2 549 aa9.41□□□□□ -0.9
CLIP4-208ENST00000456385 A0A1B0GTQ1 180 aa9.41□□□□□ -0.9
CLIP4-208ENST00000456385 TBC1D3BA6NDS4 549 aa9.41□□□□□ -0.9
CLIP4-208ENST00000456385 TBC1D3FA6NER0 549 aaPredicted RBP9.41□□□□□ -0.9
CLIP4-208ENST00000456385 HOXA2O43364 376 aa9.41□□□□□ -0.9
CLIP4-208ENST00000456385 BCL2L11O43521 198 aa9.41□□□□□ -0.9
CLIP4-208ENST00000456385 SGCEO43556 437 aa9.41□□□□□ -0.9
CLIP4-208ENST00000456385 OR2T1O43869 369 aa9.41□□□□□ -0.9
CLIP4-208ENST00000456385 FADS1O60427 444 aa9.41□□□□□ -0.9
CLIP4-208ENST00000456385 DNAJB6O75190 326 aa9.41□□□□□ -0.9
CLIP4-208ENST00000456385 CD1AP06126 327 aa9.41□□□□□ -0.9
CLIP4-208ENST00000456385 FABP1P07148 127 aa9.41□□□□□ -0.9
CLIP4-208ENST00000456385 OR8G3PP0DMU2 310 aa9.41□□□□□ -0.9
CLIP4-208ENST00000456385 NID1P14543 1247 aa9.41□□□□□ -0.9
CLIP4-208ENST00000456385 CBR1P16152 277 aa9.41□□□□□ -0.9
CLIP4-208ENST00000456385 AGTR1P30556 359 aa9.41□□□□□ -0.9
CLIP4-208ENST00000456385 MNDAP41218 407 aa9.41□□□□□ -0.9
CLIP4-208ENST00000456385 ATP1B3P54709 279 aa9.41□□□□□ -0.9
CLIP4-208ENST00000456385 MESP2Q0VG99 397 aa9.41□□□□□ -0.9
CLIP4-208ENST00000456385 NR0B2Q15466 257 aa9.41□□□□□ -0.9
CLIP4-208ENST00000456385 CEBPEQ15744 281 aa9.41□□□□□ -0.9
CLIP4-208ENST00000456385 MLF2Q15773 248 aaPredicted RBP9.41□□□□□ -0.9
CLIP4-208ENST00000456385 PLEKHN1Q494U1 663 aaPredicted RBP9.41□□□□□ -0.9
CLIP4-208ENST00000456385 FNDC3BQ53EP0 1204 aaKnown RBP9.41□□□□□ -0.9
CLIP4-208ENST00000456385 NKAIN2Q5VXU1 208 aa9.41□□□□□ -0.9
CLIP4-208ENST00000456385 METRNLQ641Q3 311 aa9.41□□□□□ -0.9
CLIP4-208ENST00000456385 TBC1D3GQ6DHY5 549 aa9.41□□□□□ -0.9
CLIP4-208ENST00000456385 C11orf87Q6NUJ2 197 aa9.41□□□□□ -0.9
CLIP4-208ENST00000456385 UQCC3Q6UW78 93 aa9.41□□□□□ -0.9
CLIP4-208ENST00000456385 LIN28BQ6ZN17 250 aaKnown RBP eCLIP9.41□□□□□ -0.9
CLIP4-208ENST00000456385 OR1J2Q8NGS2 313 aa9.41□□□□□ -0.9
CLIP4-208ENST00000456385 GAL3ST1Q99999 423 aa9.41□□□□□ -0.9
CLIP4-208ENST00000456385 PITHD1Q9GZP4 211 aaPredicted RBP9.41□□□□□ -0.9
CLIP4-208ENST00000456385 ADAP2Q9NPF8 381 aa9.41□□□□□ -0.9
CLIP4-208ENST00000456385 SPHK2Q9NRA0 654 aa9.41□□□□□ -0.9
CLIP4-208ENST00000456385 ZNF629Q9UEG4 869 aaPredicted RBP9.41□□□□□ -0.9
CLIP4-208ENST00000456385 STEAP1Q9UHE8 339 aa9.41□□□□□ -0.9
CLIP4-208ENST00000456385 GPN3Q9UHW5 284 aaPredicted RBP9.41□□□□□ -0.9
CLIP4-208ENST00000456385 M0QYG6 137 aa9.4□□□□□ -0.9
CLIP4-208ENST00000456385 VEGFDO43915 354 aa9.4□□□□□ -0.9
CLIP4-208ENST00000456385 RNGTTO60942 597 aaKnown RBP9.4□□□□□ -0.9
CLIP4-208ENST00000456385 CTAG2O75638 210 aa9.4□□□□□ -0.9
CLIP4-208ENST00000456385 CXCL14O95715 111 aa9.4□□□□□ -0.9
CLIP4-208ENST00000456385 ITGB2P05107 769 aa9.4□□□□□ -0.9
CLIP4-208ENST00000456385 ANXA2P07355 339 aaKnown RBP9.4□□□□□ -0.9
CLIP4-208ENST00000456385 THBS1P07996 1170 aa9.4□□□□□ -0.9
CLIP4-208ENST00000456385 FBXO45P0C2W1 286 aa9.4□□□□□ -0.9
CLIP4-208ENST00000456385 CSRP1P21291 193 aaKnown RBP9.4□□□□□ -0.9
CLIP4-208ENST00000456385 RORAP35398 523 aa9.4□□□□□ -0.9
CLIP4-208ENST00000456385 DLSTP36957 453 aa9.4□□□□□ -0.9
CLIP4-208ENST00000456385 PTGFRP43088 359 aa9.4□□□□□ -0.9
CLIP4-208ENST00000456385 DIO1P49895 249 aa9.4□□□□□ -0.9
CLIP4-208ENST00000456385 SNRPEP62304 92 aaKnown RBP9.4□□□□□ -0.9
CLIP4-208ENST00000456385 GGTLC2Q14390 218 aa9.4□□□□□ -0.9
CLIP4-208ENST00000456385 Q499Y3 187 aa9.4□□□□□ -0.9
CLIP4-208ENST00000456385 PRRT3Q5FWE3 981 aa9.4□□□□□ -0.9
CLIP4-208ENST00000456385 DCST2Q5T1A1 773 aa9.4□□□□□ -0.9
CLIP4-208ENST00000456385 LIN54Q6MZP7 749 aa9.4□□□□□ -0.9
CLIP4-208ENST00000456385 STEAP1BQ6NZ63 245 aa9.4□□□□□ -0.9
CLIP4-208ENST00000456385 ZAR1Q86SH2 424 aa9.4□□□□□ -0.9
CLIP4-208ENST00000456385 CCDC36Q8IYA8 594 aa9.4□□□□□ -0.9
CLIP4-208ENST00000456385 SPAG16Q8N0X2 631 aa9.4□□□□□ -0.9
CLIP4-208ENST00000456385 ARMC10Q8N2F6 343 aa9.4□□□□□ -0.9
CLIP4-208ENST00000456385 ZNF619Q8N2I2 560 aa9.4□□□□□ -0.9
CLIP4-208ENST00000456385 ZNF614Q8N883 585 aa9.4□□□□□ -0.9
CLIP4-208ENST00000456385 ZNF511Q8NB15 262 aa9.4□□□□□ -0.9
CLIP4-208ENST00000456385 CLEC1AQ8NC01 280 aa9.4□□□□□ -0.9
CLIP4-208ENST00000456385 PAQR8Q8TEZ7 354 aa9.4□□□□□ -0.9
CLIP4-208ENST00000456385 ARRDC3Q96B67 414 aa9.4□□□□□ -0.9
CLIP4-208ENST00000456385 RASD2Q96D21 266 aa9.4□□□□□ -0.9
CLIP4-208ENST00000456385 TSSK2Q96PF2 358 aa9.4□□□□□ -0.9
CLIP4-208ENST00000456385 PDCD10Q9BUL8 212 aa9.4□□□□□ -0.9
CLIP4-208ENST00000456385 ZNF350Q9GZX5 532 aa9.4□□□□□ -0.9
CLIP4-208ENST00000456385 C1orf198Q9H425 327 aa9.4□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms