RNA–Protein interactions for RNA: ENST00000455656.1

TMEM56-202, Transcript of transmembrane protein 56, humanhuman

TSL 5

Gene TMEM56, Length 609 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM56-202ENST00000455656 TMEM108Q6UXF1 575 aa10.34□□□□□ -0.75
TMEM56-202ENST00000455656 DEF8Q6ZN54 512 aa10.34□□□□□ -0.75
TMEM56-202ENST00000455656 ABHD12BQ7Z5M8 362 aaPredicted RBP10.34□□□□□ -0.75
TMEM56-202ENST00000455656 PIGWQ7Z7B1 504 aa10.34□□□□□ -0.75
TMEM56-202ENST00000455656 VTCN1Q7Z7D3 282 aa10.34□□□□□ -0.75
TMEM56-202ENST00000455656 SMAP2Q8WU79 429 aaPredicted RBP10.34□□□□□ -0.75
TMEM56-202ENST00000455656 TMEM255BQ8WV15 326 aa10.34□□□□□ -0.75
TMEM56-202ENST00000455656 TMEM171Q8WVE6 324 aa10.34□□□□□ -0.75
TMEM56-202ENST00000455656 TRAF4Q9BUZ4 470 aaPredicted RBP10.34□□□□□ -0.75
TMEM56-202ENST00000455656 GRIP2Q9C0E4 1043 aa10.34□□□□□ -0.75
TMEM56-202ENST00000455656 FAM107BQ9H098 131 aa10.34□□□□□ -0.75
TMEM56-202ENST00000455656 ALG2Q9H553 416 aa10.34□□□□□ -0.75
TMEM56-202ENST00000455656 SEC61A2Q9H9S3 476 aa10.34□□□□□ -0.75
TMEM56-202ENST00000455656 EFCAB1Q9HAE3 211 aa10.34□□□□□ -0.75
TMEM56-202ENST00000455656 MAN2C1Q9NTJ4 1040 aa10.34□□□□□ -0.75
TMEM56-202ENST00000455656 C20orf141Q9NUB4 165 aa10.34□□□□□ -0.75
TMEM56-202ENST00000455656 CISD1Q9NZ45 108 aaKnown RBP10.34□□□□□ -0.75
TMEM56-202ENST00000455656 CRNNQ9UBG3 495 aaPredicted RBP10.34□□□□□ -0.75
TMEM56-202ENST00000455656 RIMS3Q9UJD0 308 aa10.34□□□□□ -0.75
TMEM56-202ENST00000455656 ZNF229Q9UJW7 825 aa10.34□□□□□ -0.75
TMEM56-202ENST00000455656 AP3M1Q9Y2T2 418 aa10.34□□□□□ -0.75
TMEM56-202ENST00000455656 SNX13Q9Y5W8 968 aa10.34□□□□□ -0.75
TMEM56-202ENST00000455656 ZFHX3Q15911 3703 aa10.33□□□□□ -0.76
TMEM56-202ENST00000455656 CR1P17927 2039 aa10.33□□□□□ -0.76
TMEM56-202ENST00000455656 CXCR6O00574 342 aa10.33□□□□□ -0.76
TMEM56-202ENST00000455656 KPNA4O00629 521 aaPredicted RBP10.33□□□□□ -0.76
TMEM56-202ENST00000455656 FFAR1O14842 300 aa10.33□□□□□ -0.76
TMEM56-202ENST00000455656 PRSS23O95084 383 aa10.33□□□□□ -0.76
TMEM56-202ENST00000455656 IGF2P01344 180 aa10.33□□□□□ -0.76
TMEM56-202ENST00000455656 IGLV1-44P01699 117 aa10.33□□□□□ -0.76
TMEM56-202ENST00000455656 MT-ND1P03886 318 aa10.33□□□□□ -0.76
TMEM56-202ENST00000455656 ADORA3P0DMS8 318 aa10.33□□□□□ -0.76
TMEM56-202ENST00000455656 CDKN1AP38936 164 aa10.33□□□□□ -0.76
TMEM56-202ENST00000455656 RBM34P42696 430 aaKnown RBP10.33□□□□□ -0.76
TMEM56-202ENST00000455656 CDH11P55287 796 aa10.33□□□□□ -0.76
TMEM56-202ENST00000455656 SH3BGRP55822 239 aaPredicted RBP10.33□□□□□ -0.76
TMEM56-202ENST00000455656 PRPS1P60891 318 aa10.33□□□□□ -0.76
TMEM56-202ENST00000455656 GNGT1P63211 74 aa10.33□□□□□ -0.76
TMEM56-202ENST00000455656 TUBA1BP68363 451 aa10.33□□□□□ -0.76
TMEM56-202ENST00000455656 TUBA4AP68366 448 aa10.33□□□□□ -0.76
TMEM56-202ENST00000455656 ARF1P84077 181 aaKnown RBP10.33□□□□□ -0.76
TMEM56-202ENST00000455656 C1DQ13901 141 aaKnown RBP10.33□□□□□ -0.76
TMEM56-202ENST00000455656 ANKRD16Q6P6B7 361 aa10.33□□□□□ -0.76
TMEM56-202ENST00000455656 KLHL17Q6TDP4 642 aa10.33□□□□□ -0.76
TMEM56-202ENST00000455656 TUBA1AQ71U36 451 aa10.33□□□□□ -0.76
TMEM56-202ENST00000455656 CBLL1Q75N03 491 aa10.33□□□□□ -0.76
TMEM56-202ENST00000455656 ZNF627Q7L945 461 aa10.33□□□□□ -0.76
TMEM56-202ENST00000455656 YTHDF3Q7Z739 585 aaKnown RBP10.33□□□□□ -0.76
TMEM56-202ENST00000455656 MYPOPQ86VE0 399 aaPredicted RBP10.33□□□□□ -0.76
TMEM56-202ENST00000455656 CIARTQ8N365 385 aaPredicted RBP10.33□□□□□ -0.76
TMEM56-202ENST00000455656 PIK3C3Q8NEB9 887 aa10.33□□□□□ -0.76
TMEM56-202ENST00000455656 LIPHQ8WWY8 451 aa10.33□□□□□ -0.76
TMEM56-202ENST00000455656 RADILQ96JH8 1075 aa10.33□□□□□ -0.76
TMEM56-202ENST00000455656 LRR1Q96L50 414 aa10.33□□□□□ -0.76
TMEM56-202ENST00000455656 ZNF75AQ96N20 296 aa10.33□□□□□ -0.76
TMEM56-202ENST00000455656 GSX1Q9H4S2 264 aaPredicted RBP10.33□□□□□ -0.76
TMEM56-202ENST00000455656 CRLF2Q9HC73 371 aa10.33□□□□□ -0.76
TMEM56-202ENST00000455656 OBP2BQ9NPH6 170 aa10.33□□□□□ -0.76
TMEM56-202ENST00000455656 NANSQ9NR45 359 aa10.33□□□□□ -0.76
TMEM56-202ENST00000455656 MGAT4BQ9UQ53 548 aa10.33□□□□□ -0.76
TMEM56-202ENST00000455656 ARFGEF3Q5TH69 2177 aa10.33□□□□□ -0.76
TMEM56-202ENST00000455656 A0A096LPE4 126 aa10.32□□□□□ -0.76
TMEM56-202ENST00000455656 A0A1W2PPZ6 126 aa10.32□□□□□ -0.76
TMEM56-202ENST00000455656 C11orf98E9PRG8 122 aa10.32□□□□□ -0.76
TMEM56-202ENST00000455656 J3KTA2 159 aa10.32□□□□□ -0.76
TMEM56-202ENST00000455656 AKAP8O43823 692 aaKnown RBP10.32□□□□□ -0.76
TMEM56-202ENST00000455656 PIP5K1CO60331 668 aa10.32□□□□□ -0.76
TMEM56-202ENST00000455656 NDUFS7O75251 213 aa10.32□□□□□ -0.76
TMEM56-202ENST00000455656 KRT33AO76009 404 aa10.32□□□□□ -0.76
TMEM56-202ENST00000455656 SEC14L2O76054 403 aa10.32□□□□□ -0.76
TMEM56-202ENST00000455656 WNT11O96014 354 aa10.32□□□□□ -0.76
TMEM56-202ENST00000455656 IFNA14P01570 189 aa10.32□□□□□ -0.76
TMEM56-202ENST00000455656 IGKV3-15P01624 115 aa10.32□□□□□ -0.76
TMEM56-202ENST00000455656 THRBP10828 461 aa10.32□□□□□ -0.76
TMEM56-202ENST00000455656 HOXB1P14653 301 aaPredicted RBP10.32□□□□□ -0.76
TMEM56-202ENST00000455656 FOSL1P15407 271 aa10.32□□□□□ -0.76
TMEM56-202ENST00000455656 BIDP55957 195 aa10.32□□□□□ -0.76
TMEM56-202ENST00000455656 TAS2R41P59536 307 aa10.32□□□□□ -0.76
TMEM56-202ENST00000455656 PSME3P61289 254 aa10.32□□□□□ -0.76
TMEM56-202ENST00000455656 CAMK2DQ13557 499 aa10.32□□□□□ -0.76
TMEM56-202ENST00000455656 FXNQ16595 210 aa10.32□□□□□ -0.76
TMEM56-202ENST00000455656 CARD17Q5XLA6 110 aa10.32□□□□□ -0.76
TMEM56-202ENST00000455656 HMBOX1Q6NT76 420 aa10.32□□□□□ -0.76
TMEM56-202ENST00000455656 C10orf53Q8N6V4 93 aa10.32□□□□□ -0.76
TMEM56-202ENST00000455656 RBM15BQ8NDT2 890 aaKnown RBP10.32□□□□□ -0.76
TMEM56-202ENST00000455656 TMEM239Q8WW34 195 aa10.32□□□□□ -0.76
TMEM56-202ENST00000455656 TMEM54Q969K7 222 aa10.32□□□□□ -0.76
TMEM56-202ENST00000455656 CMTM5Q96DZ9 223 aa10.32□□□□□ -0.76
TMEM56-202ENST00000455656 TPD52L3Q96J77 140 aa10.32□□□□□ -0.76
TMEM56-202ENST00000455656 PRRC1Q96M27 445 aa10.32□□□□□ -0.76
TMEM56-202ENST00000455656 Q96MF0 132 aa10.32□□□□□ -0.76
TMEM56-202ENST00000455656 SMR3AQ99954 134 aa10.32□□□□□ -0.76
TMEM56-202ENST00000455656 NSRP1Q9H0G5 558 aaKnown RBP10.32□□□□□ -0.76
TMEM56-202ENST00000455656 CXorf56Q9H5V9 222 aa10.32□□□□□ -0.76
TMEM56-202ENST00000455656 NOX3Q9HBY0 568 aa10.32□□□□□ -0.76
TMEM56-202ENST00000455656 B3GNT2Q9NY97 397 aa10.32□□□□□ -0.76
TMEM56-202ENST00000455656 ZNF224Q9NZL3 707 aa10.32□□□□□ -0.76
TMEM56-202ENST00000455656 CHD3Q12873 2000 aaKnown RBP10.31□□□□□ -0.76
TMEM56-202ENST00000455656 ZNF99A8MXY4 864 aaPredicted RBP10.31□□□□□ -0.76
TMEM56-202ENST00000455656 ATP6V1G2-DDX39BF2Z307 99 aa10.31□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms