RNA–Protein interactions for RNA: ENST00000454830.6

CLK3-203, Transcript of CDC like kinase 3, humanhuman

TSL 5

Gene CLK3, Length 3,787 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-203ENST00000454830 ZNF671Q8TAW3 534 aa12.36□□□□□ -0.43
CLK3-203ENST00000454830 OR14A2Q96R54 314 aa12.36□□□□□ -0.43
CLK3-203ENST00000454830 POLHQ9Y253 713 aa12.36□□□□□ -0.43
CLK3-203ENST00000454830 R4GN57 208 aa12.36□□□□□ -0.43
CLK3-203ENST00000454830 ISPDA4D126 451 aa12.36□□□□□ -0.43
CLK3-203ENST00000454830 NPIPA5E9PKD4 350 aa12.36□□□□□ -0.43
CLK3-203ENST00000454830 APEX1P27695 318 aaKnown RBP12.36□□□□□ -0.43
CLK3-203ENST00000454830 TALDO1P37837 337 aa12.36□□□□□ -0.43
CLK3-203ENST00000454830 GPR139Q6DWJ6 353 aa12.36□□□□□ -0.43
CLK3-203ENST00000454830 CCBE1Q6UXH8 406 aaPredicted RBP12.36□□□□□ -0.43
CLK3-203ENST00000454830 GPAT4Q86UL3 456 aa12.36□□□□□ -0.43
CLK3-203ENST00000454830 MS4A15Q8N5U1 240 aa12.36□□□□□ -0.43
CLK3-203ENST00000454830 SAMD12Q8N8I0 201 aa12.36□□□□□ -0.43
CLK3-203ENST00000454830 C19orf18Q8NEA5 215 aa12.36□□□□□ -0.43
CLK3-203ENST00000454830 NUBPLQ8TB37 319 aa12.36□□□□□ -0.43
CLK3-203ENST00000454830 TIMP4Q99727 224 aa12.36□□□□□ -0.43
CLK3-203ENST00000454830 SEMA4CQ9C0C4 833 aa12.36□□□□□ -0.43
CLK3-203ENST00000454830 PPIL3Q9H2H8 161 aaKnown RBP12.36□□□□□ -0.43
CLK3-203ENST00000454830 WDR76Q9H967 626 aa12.36□□□□□ -0.43
CLK3-203ENST00000454830 NPIPA1Q9UND3 350 aa12.36□□□□□ -0.43
CLK3-203ENST00000454830 RASD1Q9Y272 281 aa12.36□□□□□ -0.43
CLK3-203ENST00000454830 B3GALT1Q9Y5Z6 326 aa12.36□□□□□ -0.43
CLK3-203ENST00000454830 OR2T1O43869 369 aa12.35□□□□□ -0.43
CLK3-203ENST00000454830 BGLAPP02818 100 aa12.35□□□□□ -0.43
CLK3-203ENST00000454830 TGM1P22735 817 aa12.35□□□□□ -0.43
CLK3-203ENST00000454830 RPS18P62269 152 aaKnown RBP12.35□□□□□ -0.43
CLK3-203ENST00000454830 BDH1Q02338 343 aa12.35□□□□□ -0.43
CLK3-203ENST00000454830 TLE3Q04726 772 aa12.35□□□□□ -0.43
CLK3-203ENST00000454830 ACSM1Q08AH1 577 aa12.35□□□□□ -0.43
CLK3-203ENST00000454830 BAK1Q16611 211 aa12.35□□□□□ -0.43
CLK3-203ENST00000454830 SLC35D3Q5M8T2 416 aa12.35□□□□□ -0.43
CLK3-203ENST00000454830 SLC23A3Q6PIS1 610 aa12.35□□□□□ -0.43
CLK3-203ENST00000454830 UTS2BQ765I0 119 aa12.35□□□□□ -0.43
CLK3-203ENST00000454830 HDHD2Q9H0R4 259 aa12.35□□□□□ -0.43
CLK3-203ENST00000454830 MIXL1Q9H2W2 232 aa12.35□□□□□ -0.43
CLK3-203ENST00000454830 SIAEQ9HAT2 523 aa12.35□□□□□ -0.43
CLK3-203ENST00000454830 ANKRD10Q9NXR5 420 aa12.35□□□□□ -0.43
CLK3-203ENST00000454830 ADAM30Q9UKF2 790 aa12.35□□□□□ -0.43
CLK3-203ENST00000454830 AK6Q9Y3D8 172 aaKnown RBP12.35□□□□□ -0.43
CLK3-203ENST00000454830 A0A1W2PQ09 198 aa12.35□□□□□ -0.43
CLK3-203ENST00000454830 HTR3EA5X5Y0 456 aa12.35□□□□□ -0.43
CLK3-203ENST00000454830 ACOD1A6NK06 481 aa12.35□□□□□ -0.43
CLK3-203ENST00000454830 RAD1O60671 282 aa12.35□□□□□ -0.43
CLK3-203ENST00000454830 ITGA10O75578 1167 aa12.35□□□□□ -0.43
CLK3-203ENST00000454830 PAHP00439 452 aa12.35□□□□□ -0.43
CLK3-203ENST00000454830 JMJD7P0C870 316 aa12.35□□□□□ -0.43
CLK3-203ENST00000454830 IMPDH2P12268 514 aa12.35□□□□□ -0.43
CLK3-203ENST00000454830 PPP3R1P63098 170 aa12.35□□□□□ -0.43
CLK3-203ENST00000454830 POU3F1Q03052 451 aaPredicted RBP12.35□□□□□ -0.43
CLK3-203ENST00000454830 CD200R1LQ6Q8B3 271 aa12.35□□□□□ -0.43
CLK3-203ENST00000454830 MISPQ8IVT2 679 aa12.35□□□□□ -0.43
CLK3-203ENST00000454830 NSMAFQ92636 917 aa12.35□□□□□ -0.43
CLK3-203ENST00000454830 HPS1Q92902 700 aa12.35□□□□□ -0.43
CLK3-203ENST00000454830 LRFN5Q96NI6 719 aa12.35□□□□□ -0.43
CLK3-203ENST00000454830 SLC25A18Q9H1K4 315 aa12.35□□□□□ -0.43
CLK3-203ENST00000454830 TSPAN10Q9H1Z9 355 aaPredicted RBP12.35□□□□□ -0.43
CLK3-203ENST00000454830 SDHAF3Q9NRP4 125 aa12.35□□□□□ -0.43
CLK3-203ENST00000454830 TAS2R5Q9NYW4 299 aa12.35□□□□□ -0.43
CLK3-203ENST00000454830 SNPHO15079 494 aa12.35□□□□□ -0.43
CLK3-203ENST00000454830 SPNP16150 400 aa12.35□□□□□ -0.43
CLK3-203ENST00000454830 UQCRC1P31930 480 aa12.35□□□□□ -0.43
CLK3-203ENST00000454830 SCN1BQ07699 218 aa12.35□□□□□ -0.43
CLK3-203ENST00000454830 LRRC69Q6ZNQ3 347 aa12.35□□□□□ -0.43
CLK3-203ENST00000454830 OR8K3Q8NH51 312 aa12.35□□□□□ -0.43
CLK3-203ENST00000454830 OIT3Q8WWZ8 545 aa12.35□□□□□ -0.43
CLK3-203ENST00000454830 ZC3H10Q96K80 434 aaKnown RBP12.35□□□□□ -0.43
CLK3-203ENST00000454830 INTS14Q96SY0 518 aa12.35□□□□□ -0.43
CLK3-203ENST00000454830 MED18Q9BUE0 208 aa12.35□□□□□ -0.43
CLK3-203ENST00000454830 PLPP2O43688 288 aa12.34□□□□□ -0.43
CLK3-203ENST00000454830 SSX4O60224 188 aa12.34□□□□□ -0.43
CLK3-203ENST00000454830 AKR7A3O95154 331 aa12.34□□□□□ -0.43
CLK3-203ENST00000454830 SERPINA3P01011 423 aa12.34□□□□□ -0.43
CLK3-203ENST00000454830 TACSTD2P09758 323 aa12.34□□□□□ -0.43
CLK3-203ENST00000454830 FGF5P12034 268 aa12.34□□□□□ -0.43
CLK3-203ENST00000454830 IL7P13232 177 aa12.34□□□□□ -0.43
CLK3-203ENST00000454830 FOLR3P41439 243 aa12.34□□□□□ -0.43
CLK3-203ENST00000454830 GPR50Q13585 617 aa12.34□□□□□ -0.43
CLK3-203ENST00000454830 CDK5R1Q15078 307 aa12.34□□□□□ -0.43
CLK3-203ENST00000454830 SGCBQ16585 318 aa12.34□□□□□ -0.43
CLK3-203ENST00000454830 ZNF57Q68EA5 555 aaPredicted RBP12.34□□□□□ -0.43
CLK3-203ENST00000454830 FAM122BQ7Z309 247 aa12.34□□□□□ -0.43
CLK3-203ENST00000454830 MINDY2Q8NBR6 621 aa12.34□□□□□ -0.43
CLK3-203ENST00000454830 RASL10BQ96S79 203 aa12.34□□□□□ -0.43
CLK3-203ENST00000454830 CCDC32Q9BV29 185 aa12.34□□□□□ -0.43
CLK3-203ENST00000454830 ZNF160Q9HCG1 818 aa12.34□□□□□ -0.43
CLK3-203ENST00000454830 EXTL2Q9UBQ6 330 aa12.34□□□□□ -0.43
CLK3-203ENST00000454830 N6AMT1Q9Y5N5 214 aa12.34□□□□□ -0.43
CLK3-203ENST00000454830 A0A1B0GTH9 108 aa12.34□□□□□ -0.43
CLK3-203ENST00000454830 TRIM3O75382 744 aaPredicted RBP12.34□□□□□ -0.43
CLK3-203ENST00000454830 MT-ATP6P00846 226 aa12.34□□□□□ -0.43
CLK3-203ENST00000454830 HLA-DOBP13765 273 aa12.34□□□□□ -0.43
CLK3-203ENST00000454830 HOXD12P35452 270 aa12.34□□□□□ -0.43
CLK3-203ENST00000454830 HTR3AP46098 478 aa12.34□□□□□ -0.43
CLK3-203ENST00000454830 RPL27P61353 136 aaKnown RBP12.34□□□□□ -0.43
CLK3-203ENST00000454830 ETFDHQ16134 617 aa12.34□□□□□ -0.43
CLK3-203ENST00000454830 ZNF385CQ66K41 422 aaPredicted RBP12.34□□□□□ -0.43
CLK3-203ENST00000454830 ZNF676Q8N7Q3 588 aa12.34□□□□□ -0.43
CLK3-203ENST00000454830 HSD17B8Q92506 261 aa12.34□□□□□ -0.43
CLK3-203ENST00000454830 JAM3Q9BX67 310 aa12.34□□□□□ -0.43
CLK3-203ENST00000454830 RNF32Q9H0A6 362 aa12.34□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 62.2 ms