RNA–Protein interactions for RNA: ENST00000454569.5

SCN9A-205, Transcript of sodium voltage-gated channel alpha subunit 9, humanhuman

TSL 1 (best)

Gene SCN9A, Length 1,585 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN9A-205ENST00000454569 RAC3P60763 192 aa9.8□□□□□ -0.84
SCN9A-205ENST00000454569 SLC35A1P78382 337 aa9.8□□□□□ -0.84
SCN9A-205ENST00000454569 MYBPC1Q00872 1141 aa9.8□□□□□ -0.84
SCN9A-205ENST00000454569 ZP4Q12836 540 aa9.8□□□□□ -0.84
SCN9A-205ENST00000454569 TOP3AQ13472 1001 aaPredicted RBP9.8□□□□□ -0.84
SCN9A-205ENST00000454569 IL18R1Q13478 541 aa9.8□□□□□ -0.84
SCN9A-205ENST00000454569 KEAP1Q14145 624 aa9.8□□□□□ -0.84
SCN9A-205ENST00000454569 ZNF239Q16600 458 aaKnown RBP9.8□□□□□ -0.84
SCN9A-205ENST00000454569 SLC27A4Q6P1M0 643 aa9.8□□□□□ -0.84
SCN9A-205ENST00000454569 PTCHD4Q6ZW05 846 aa9.8□□□□□ -0.84
SCN9A-205ENST00000454569 C8orf59Q8N0T1 100 aaPredicted RBP9.8□□□□□ -0.84
SCN9A-205ENST00000454569 LNX2Q8N448 690 aa9.8□□□□□ -0.84
SCN9A-205ENST00000454569 TCEANCQ8N8B7 351 aa9.8□□□□□ -0.84
SCN9A-205ENST00000454569 ZNRF4Q8WWF5 429 aa9.8□□□□□ -0.84
SCN9A-205ENST00000454569 GPR137Q96N19 417 aa9.8□□□□□ -0.84
SCN9A-205ENST00000454569 ERMAPQ96PL5 475 aaPredicted RBP9.8□□□□□ -0.84
SCN9A-205ENST00000454569 DDOQ99489 341 aa9.8□□□□□ -0.84
SCN9A-205ENST00000454569 MED20Q9H944 212 aa9.8□□□□□ -0.84
SCN9A-205ENST00000454569 ENOPH1Q9UHY7 261 aa9.8□□□□□ -0.84
SCN9A-205ENST00000454569 SCOCQ9UIL1 159 aa9.8□□□□□ -0.84
SCN9A-205ENST00000454569 CAMK2AQ9UQM7 478 aa9.8□□□□□ -0.84
SCN9A-205ENST00000454569 TEX13CA0A0J9YWL9 993 aa9.79□□□□□ -0.84
SCN9A-205ENST00000454569 H7C1C5 153 aa9.79□□□□□ -0.84
SCN9A-205ENST00000454569 LINC01387J3KSC0 135 aa9.79□□□□□ -0.84
SCN9A-205ENST00000454569 SURF4O15260 269 aa9.79□□□□□ -0.84
SCN9A-205ENST00000454569 RNF13O43567 381 aa9.79□□□□□ -0.84
SCN9A-205ENST00000454569 TGM6O95932 706 aa9.79□□□□□ -0.84
SCN9A-205ENST00000454569 NOS3P29474 1203 aa9.79□□□□□ -0.84
SCN9A-205ENST00000454569 SLC6A6P31641 620 aa9.79□□□□□ -0.84
SCN9A-205ENST00000454569 CDKN2AP42771 156 aaKnown RBP9.79□□□□□ -0.84
SCN9A-205ENST00000454569 LCN6P62502 163 aa9.79□□□□□ -0.84
SCN9A-205ENST00000454569 TAGLNQ01995 201 aaKnown RBP9.79□□□□□ -0.84
SCN9A-205ENST00000454569 PUDPQ08623 228 aa9.79□□□□□ -0.84
SCN9A-205ENST00000454569 MAD2L1BPQ15013 274 aaPredicted RBP9.79□□□□□ -0.84
SCN9A-205ENST00000454569 INAQ16352 499 aa9.79□□□□□ -0.84
SCN9A-205ENST00000454569 BCL2A1Q16548 175 aa9.79□□□□□ -0.84
SCN9A-205ENST00000454569 ACKR1Q16570 336 aa9.79□□□□□ -0.84
SCN9A-205ENST00000454569 MESTQ5EB52 335 aa9.79□□□□□ -0.84
SCN9A-205ENST00000454569 MYO7BQ6PIF6 2116 aa9.79□□□□□ -0.84
SCN9A-205ENST00000454569 PAQR6Q6TCH4 344 aa9.79□□□□□ -0.84
SCN9A-205ENST00000454569 DPY19L2P2Q6ZN68 376 aa9.79□□□□□ -0.84
SCN9A-205ENST00000454569 GPAT4Q86UL3 456 aa9.79□□□□□ -0.84
SCN9A-205ENST00000454569 ALDH16A1Q8IZ83 802 aa9.79□□□□□ -0.84
SCN9A-205ENST00000454569 ZIC4Q8N9L1 334 aa9.79□□□□□ -0.84
SCN9A-205ENST00000454569 SCAIQ8N9R8 606 aa9.79□□□□□ -0.84
SCN9A-205ENST00000454569 CYB561A3Q8NBI2 242 aa9.79□□□□□ -0.84
SCN9A-205ENST00000454569 BBS1Q8NFJ9 593 aa9.79□□□□□ -0.84
SCN9A-205ENST00000454569 OR2T33Q8NG76 320 aa9.79□□□□□ -0.84
SCN9A-205ENST00000454569 OR4K13Q8NH42 304 aa9.79□□□□□ -0.84
SCN9A-205ENST00000454569 FNDC9Q8TBE3 224 aa9.79□□□□□ -0.84
SCN9A-205ENST00000454569 FAR1Q8WVX9 515 aa9.79□□□□□ -0.84
SCN9A-205ENST00000454569 GPX7Q96SL4 187 aaPredicted RBP9.79□□□□□ -0.84
SCN9A-205ENST00000454569 RHNO1Q9BSD3 238 aa9.79□□□□□ -0.84
SCN9A-205ENST00000454569 EMC6Q9BV81 110 aa9.79□□□□□ -0.84
SCN9A-205ENST00000454569 PRDM14Q9GZV8 571 aa9.79□□□□□ -0.84
SCN9A-205ENST00000454569 FN3KQ9H479 309 aa9.79□□□□□ -0.84
SCN9A-205ENST00000454569 INIPQ9NRY2 104 aa9.79□□□□□ -0.84
SCN9A-205ENST00000454569 B3GALT5Q9Y2C3 310 aa9.79□□□□□ -0.84
SCN9A-205ENST00000454569 CORINQ9Y5Q5 1042 aa9.79□□□□□ -0.84
SCN9A-205ENST00000454569 CFAP46Q8IYW2 2715 aa9.78□□□□□ -0.84
SCN9A-205ENST00000454569 GJE1A6NN92 205 aa9.78□□□□□ -0.84
SCN9A-205ENST00000454569 ZNF716A6NP11 495 aa9.78□□□□□ -0.84
SCN9A-205ENST00000454569 TRAF3IP2O43734 574 aaPredicted RBP9.78□□□□□ -0.84
SCN9A-205ENST00000454569 TLX2O43763 284 aaPredicted RBP9.78□□□□□ -0.84
SCN9A-205ENST00000454569 CRYABP02511 175 aaKnown RBP9.78□□□□□ -0.84
SCN9A-205ENST00000454569 CD14P08571 375 aa9.78□□□□□ -0.84
SCN9A-205ENST00000454569 CLUP10909 449 aa9.78□□□□□ -0.84
SCN9A-205ENST00000454569 IFNGR1P15260 489 aa9.78□□□□□ -0.84
SCN9A-205ENST00000454569 EDNRAP25101 427 aa9.78□□□□□ -0.84
SCN9A-205ENST00000454569 GTF2E2P29084 291 aaKnown RBP9.78□□□□□ -0.84
SCN9A-205ENST00000454569 FMO3P31513 532 aa9.78□□□□□ -0.84
SCN9A-205ENST00000454569 GRK5P34947 590 aa9.78□□□□□ -0.84
SCN9A-205ENST00000454569 SMSP52788 366 aa9.78□□□□□ -0.84
SCN9A-205ENST00000454569 PRPS1P60891 318 aa9.78□□□□□ -0.84
SCN9A-205ENST00000454569 CSNK2A1P68400 391 aaPredicted RBP9.78□□□□□ -0.84
SCN9A-205ENST00000454569 IL5RAQ01344 420 aa9.78□□□□□ -0.84
SCN9A-205ENST00000454569 POU3F1Q03052 451 aaPredicted RBP9.78□□□□□ -0.84
SCN9A-205ENST00000454569 KLRB1Q12918 225 aa9.78□□□□□ -0.84
SCN9A-205ENST00000454569 CDK5R2Q13319 367 aa9.78□□□□□ -0.84
SCN9A-205ENST00000454569 SLC17A1Q14916 467 aa9.78□□□□□ -0.84
SCN9A-205ENST00000454569 MFSD13AQ14CX5 517 aa9.78□□□□□ -0.84
SCN9A-205ENST00000454569 PON3Q15166 354 aa9.78□□□□□ -0.84
SCN9A-205ENST00000454569 SNAPC1Q16533 368 aa9.78□□□□□ -0.84
SCN9A-205ENST00000454569 ARMC4Q5T2S8 1044 aa9.78□□□□□ -0.84
SCN9A-205ENST00000454569 TMEM225Q6GV28 225 aa9.78□□□□□ -0.84
SCN9A-205ENST00000454569 TMEM154Q6P9G4 183 aa9.78□□□□□ -0.84
SCN9A-205ENST00000454569 FAM180AQ6UWF9 173 aa9.78□□□□□ -0.84
SCN9A-205ENST00000454569 ZNF786Q8N393 782 aa9.78□□□□□ -0.84
SCN9A-205ENST00000454569 RPRMLQ8N4K4 120 aa9.78□□□□□ -0.84
SCN9A-205ENST00000454569 LSM14AQ8ND56 463 aaKnown RBP9.78□□□□□ -0.84
SCN9A-205ENST00000454569 SETD9Q8NE22 299 aa9.78□□□□□ -0.84
SCN9A-205ENST00000454569 SDR9C7Q8NEX9 313 aa9.78□□□□□ -0.84
SCN9A-205ENST00000454569 OR52L1Q8NGH7 329 aa9.78□□□□□ -0.84
SCN9A-205ENST00000454569 OR52E2Q8NGJ4 325 aa9.78□□□□□ -0.84
SCN9A-205ENST00000454569 RHOXF1Q8NHV9 184 aa9.78□□□□□ -0.84
SCN9A-205ENST00000454569 ABHD3Q8WU67 409 aa9.78□□□□□ -0.84
SCN9A-205ENST00000454569 FBLIM1Q8WUP2 373 aa9.78□□□□□ -0.84
SCN9A-205ENST00000454569 SGCDQ92629 289 aa9.78□□□□□ -0.84
SCN9A-205ENST00000454569 PTP4A1Q93096 173 aa9.78□□□□□ -0.84
SCN9A-205ENST00000454569 ZNF385AQ96PM9 386 aaKnown RBP9.78□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms