RNA–Protein interactions for RNA: ENST00000453847.2

HMGN3P1-201, Transcript of high mobility group nucleosomal binding domain 3 pseudogene 1, humanhuman

BASIC

Gene HMGN3P1, Length 193 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN3P1-201ENST00000453847 PHF3Q92576 2039 aaKnown RBP3.14□□□□□ -1.91
HMGN3P1-201ENST00000453847 KIF26BQ2KJY2 2108 aa3.13□□□□□ -1.91
HMGN3P1-201ENST00000453847 LINC00854A0A1B0GVQ3 168 aa3.13□□□□□ -1.91
HMGN3P1-201ENST00000453847 LRRIQ3A6PVS8 624 aaPredicted RBP3.13□□□□□ -1.91
HMGN3P1-201ENST00000453847 SIRPB1O00241 398 aa3.13□□□□□ -1.91
HMGN3P1-201ENST00000453847 NDUFAB1O14561 156 aa3.13□□□□□ -1.91
HMGN3P1-201ENST00000453847 AIM2O14862 343 aa3.13□□□□□ -1.91
HMGN3P1-201ENST00000453847 MRPS12O15235 138 aaKnown RBP3.13□□□□□ -1.91
HMGN3P1-201ENST00000453847 SIVA1O15304 175 aa3.13□□□□□ -1.91
HMGN3P1-201ENST00000453847 LINC01565O15544 149 aa3.13□□□□□ -1.91
HMGN3P1-201ENST00000453847 HUS1O60921 280 aa3.13□□□□□ -1.91
HMGN3P1-201ENST00000453847 SCELO95171 688 aa3.13□□□□□ -1.91
HMGN3P1-201ENST00000453847 CLIC3O95833 236 aa3.13□□□□□ -1.91
HMGN3P1-201ENST00000453847 TGM6O95932 706 aa3.13□□□□□ -1.91
HMGN3P1-201ENST00000453847 SEMG1P04279 462 aa3.13□□□□□ -1.91
HMGN3P1-201ENST00000453847 FOLR1P15328 257 aa3.13□□□□□ -1.91
HMGN3P1-201ENST00000453847 MSR1P21757 451 aa3.13□□□□□ -1.91
HMGN3P1-201ENST00000453847 U2AF2P26368 475 aaKnown RBP eCLIP3.13□□□□□ -1.91
HMGN3P1-201ENST00000453847 GDF1P27539 372 aa3.13□□□□□ -1.91
HMGN3P1-201ENST00000453847 RRM2P31350 389 aa3.13□□□□□ -1.91
HMGN3P1-201ENST00000453847 BMI1P35226 326 aa3.13□□□□□ -1.91
HMGN3P1-201ENST00000453847 HSD17B2P37059 387 aa3.13□□□□□ -1.91
HMGN3P1-201ENST00000453847 NBL1P41271 181 aa3.13□□□□□ -1.91
HMGN3P1-201ENST00000453847 KIR2DS4P43632 304 aa3.13□□□□□ -1.91
HMGN3P1-201ENST00000453847 BCAP31P51572 246 aa3.13□□□□□ -1.91
HMGN3P1-201ENST00000453847 MS4A2Q01362 244 aa3.13□□□□□ -1.91
HMGN3P1-201ENST00000453847 TGFBR3Q03167 851 aa3.13□□□□□ -1.91
HMGN3P1-201ENST00000453847 CD47Q08722 323 aa3.13□□□□□ -1.91
HMGN3P1-201ENST00000453847 KLHL22Q53GT1 634 aa3.13□□□□□ -1.91
HMGN3P1-201ENST00000453847 PPM1LQ5SGD2 360 aa3.13□□□□□ -1.91
HMGN3P1-201ENST00000453847 MARCH8Q5T0T0 291 aa3.13□□□□□ -1.91
HMGN3P1-201ENST00000453847 GDPD3Q7L5L3 318 aa3.13□□□□□ -1.91
HMGN3P1-201ENST00000453847 POM121L12Q8N7R1 296 aa3.13□□□□□ -1.91
HMGN3P1-201ENST00000453847 ZNF557Q8N988 423 aaPredicted RBP3.13□□□□□ -1.91
HMGN3P1-201ENST00000453847 LRRC75AQ8NAA5 344 aa3.13□□□□□ -1.91
HMGN3P1-201ENST00000453847 RASL10AQ92737 203 aa3.13□□□□□ -1.91
HMGN3P1-201ENST00000453847 ASB9Q96DX5 294 aa3.13□□□□□ -1.91
HMGN3P1-201ENST00000453847 GSDMAQ96QA5 445 aa3.13□□□□□ -1.91
HMGN3P1-201ENST00000453847 RIOK1Q9BRS2 568 aaKnown RBP3.13□□□□□ -1.91
HMGN3P1-201ENST00000453847 C19orf24Q9BVV8 132 aa3.13□□□□□ -1.91
HMGN3P1-201ENST00000453847 KRTAP4-2Q9BYR5 136 aa3.13□□□□□ -1.91
HMGN3P1-201ENST00000453847 TRIM15Q9C019 465 aa3.13□□□□□ -1.91
HMGN3P1-201ENST00000453847 SELENOIQ9C0D9 397 aa3.13□□□□□ -1.91
HMGN3P1-201ENST00000453847 Q9H3A6 140 aa3.13□□□□□ -1.91
HMGN3P1-201ENST00000453847 NXF3Q9H4D5 531 aaKnown RBP3.13□□□□□ -1.91
HMGN3P1-201ENST00000453847 KLHL21Q9UJP4 597 aa3.13□□□□□ -1.91
HMGN3P1-201ENST00000453847 COMMD3-BMI1R4GMX3 469 aa3.13□□□□□ -1.91
HMGN3P1-201ENST00000453847 V9GY05 133 aa3.13□□□□□ -1.91
HMGN3P1-201ENST00000453847 EIF4G1Q04637 1599 aaKnown RBP3.12□□□□□ -1.91
HMGN3P1-201ENST00000453847 RBMY1BA6NDE4 496 aaKnown RBP3.12□□□□□ -1.91
HMGN3P1-201ENST00000453847 RBMY1EA6NEQ0 496 aaKnown RBP3.12□□□□□ -1.91
HMGN3P1-201ENST00000453847 PPP1R2P9O14990 202 aa3.12□□□□□ -1.91
HMGN3P1-201ENST00000453847 SNAI1O95863 264 aaPredicted RBP3.12□□□□□ -1.91
HMGN3P1-201ENST00000453847 IGHV3-23P01764 117 aa3.12□□□□□ -1.91
HMGN3P1-201ENST00000453847 C2P06681 752 aa3.12□□□□□ -1.91
HMGN3P1-201ENST00000453847 S100A9P06702 114 aaKnown RBP3.12□□□□□ -1.91
HMGN3P1-201ENST00000453847 KLK3P07288 261 aaPredicted RBP3.12□□□□□ -1.91
HMGN3P1-201ENST00000453847 CLTAP09496 248 aa3.12□□□□□ -1.91
HMGN3P1-201ENST00000453847 RBMY1DP0C7P1 496 aaKnown RBP3.12□□□□□ -1.91
HMGN3P1-201ENST00000453847 ZNF883P0CG24 379 aa3.12□□□□□ -1.91
HMGN3P1-201ENST00000453847 UBCP0CG48 685 aaKnown RBP3.12□□□□□ -1.91
HMGN3P1-201ENST00000453847 RBMY1A1P0DJD3 496 aaKnown RBP3.12□□□□□ -1.91
HMGN3P1-201ENST00000453847 CTRB1P17538 263 aa3.12□□□□□ -1.91
HMGN3P1-201ENST00000453847 ZP3P21754 424 aa3.12□□□□□ -1.91
HMGN3P1-201ENST00000453847 RORAP35398 523 aa3.12□□□□□ -1.91
HMGN3P1-201ENST00000453847 AQP2P41181 271 aa3.12□□□□□ -1.91
HMGN3P1-201ENST00000453847 BTDP43251 543 aa3.12□□□□□ -1.91
HMGN3P1-201ENST00000453847 RFX3P48380 749 aa3.12□□□□□ -1.91
HMGN3P1-201ENST00000453847 CX3CR1P49238 355 aa3.12□□□□□ -1.91
HMGN3P1-201ENST00000453847 TLE4Q04727 773 aa3.12□□□□□ -1.91
HMGN3P1-201ENST00000453847 MRGPRG-AS1Q2M3A8 158 aa3.12□□□□□ -1.91
HMGN3P1-201ENST00000453847 XKR4Q5GH76 650 aa3.12□□□□□ -1.91
HMGN3P1-201ENST00000453847 CEP85LQ5SZL2 805 aa3.12□□□□□ -1.91
HMGN3P1-201ENST00000453847 METTL11BQ5VVY1 283 aa3.12□□□□□ -1.91
HMGN3P1-201ENST00000453847 TIGD3Q6B0B8 471 aa3.12□□□□□ -1.91
HMGN3P1-201ENST00000453847 CTRB2Q6GPI1 263 aa3.12□□□□□ -1.91
HMGN3P1-201ENST00000453847 PAMR1Q6UXH9 720 aa3.12□□□□□ -1.91
HMGN3P1-201ENST00000453847 BHLHA9Q7RTU4 235 aa3.12□□□□□ -1.91
HMGN3P1-201ENST00000453847 HDDC2Q7Z4H3 204 aa3.12□□□□□ -1.91
HMGN3P1-201ENST00000453847 LINC00523Q86TU6 105 aa3.12□□□□□ -1.91
HMGN3P1-201ENST00000453847 ZNF546Q86UE3 836 aa3.12□□□□□ -1.91
HMGN3P1-201ENST00000453847 CSGALNACT2Q8N6G5 542 aa3.12□□□□□ -1.91
HMGN3P1-201ENST00000453847 PRELID2Q8N945 189 aa3.12□□□□□ -1.91
HMGN3P1-201ENST00000453847 MAPK1IP1LQ8NDC0 245 aa3.12□□□□□ -1.91
HMGN3P1-201ENST00000453847 KLHL30-AS1Q8NEE0 82 aa3.12□□□□□ -1.91
HMGN3P1-201ENST00000453847 BBS1Q8NFJ9 593 aa3.12□□□□□ -1.91
HMGN3P1-201ENST00000453847 CAPSLQ8WWF8 208 aa3.12□□□□□ -1.91
HMGN3P1-201ENST00000453847 NEIL2Q969S2 332 aa3.12□□□□□ -1.91
HMGN3P1-201ENST00000453847 HSFY1Q96LI6 401 aa3.12□□□□□ -1.91
HMGN3P1-201ENST00000453847 RARRES2Q99969 163 aa3.12□□□□□ -1.91
HMGN3P1-201ENST00000453847 SIKE1Q9BRV8 207 aa3.12□□□□□ -1.91
HMGN3P1-201ENST00000453847 KRTAP4-5Q9BYR2 181 aa3.12□□□□□ -1.91
HMGN3P1-201ENST00000453847 XKR8Q9H6D3 395 aa3.12□□□□□ -1.91
HMGN3P1-201ENST00000453847 BEX1Q9HBH7 125 aa3.12□□□□□ -1.91
HMGN3P1-201ENST00000453847 RSPH14Q9UHP6 348 aa3.12□□□□□ -1.91
HMGN3P1-201ENST00000453847 CDH10Q9Y6N8 788 aa3.12□□□□□ -1.91
HMGN3P1-201ENST00000453847 RAI1Q7Z5J4 1906 aaPredicted RBP3.11□□□□□ -1.91
HMGN3P1-201ENST00000453847 HCFC1P51610 2035 aa3.11□□□□□ -1.91
HMGN3P1-201ENST00000453847 IGHV3OR16-13A0A075B7E8 117 aa3.11□□□□□ -1.91
HMGN3P1-201ENST00000453847 IGHV7-81A0A0B4J1V7 117 aa3.11□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms