RNA–Protein interactions for RNA: ENST00000453091.6

RIF1-206, Transcript of replication timing regulatory factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RIF1, Length 8,053 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-206ENST00000453091 C14orf28Q4W4Y0 310 aa7.14□□□□□ -1.27
RIF1-206ENST00000453091 SLC48A1Q6P1K1 146 aa7.14□□□□□ -1.27
RIF1-206ENST00000453091 MED25Q71SY5 747 aa7.14□□□□□ -1.27
RIF1-206ENST00000453091 C10orf111Q8N326 155 aa7.14□□□□□ -1.27
RIF1-206ENST00000453091 TCTEX1D2Q8WW35 142 aa7.14□□□□□ -1.27
RIF1-206ENST00000453091 SHDQ96IW2 340 aa7.14□□□□□ -1.27
RIF1-206ENST00000453091 CCNL2Q96S94 520 aaPredicted RBP7.14□□□□□ -1.27
RIF1-206ENST00000453091 ATF6BQ99941 703 aa7.14□□□□□ -1.27
RIF1-206ENST00000453091 C1QTNF3Q9BXJ4 246 aa7.14□□□□□ -1.27
RIF1-206ENST00000453091 SRRQ9GZT4 340 aa7.14□□□□□ -1.27
RIF1-206ENST00000453091 FKRPQ9H9S5 495 aa7.14□□□□□ -1.27
RIF1-206ENST00000453091 ENY2Q9NPA8 101 aa7.14□□□□□ -1.27
RIF1-206ENST00000453091 ACSS1Q9NUB1 689 aaPredicted RBP7.14□□□□□ -1.27
RIF1-206ENST00000453091 SLC23A2Q9UGH3 650 aa7.14□□□□□ -1.27
RIF1-206ENST00000453091 HHLA2Q9UM44 414 aa7.14□□□□□ -1.27
RIF1-206ENST00000453091 PRAMEF27A3QJZ7 478 aa7.14□□□□□ -1.27
RIF1-206ENST00000453091 TMEM189-UBE2V1I3L0A0 370 aa7.14□□□□□ -1.27
RIF1-206ENST00000453091 S100A11P31949 105 aa7.14□□□□□ -1.27
RIF1-206ENST00000453091 CD79BP40259 229 aa7.14□□□□□ -1.27
RIF1-206ENST00000453091 ACVR1Q04771 509 aa7.14□□□□□ -1.27
RIF1-206ENST00000453091 ZNF33BQ06732 778 aa7.14□□□□□ -1.27
RIF1-206ENST00000453091 PMPCAQ10713 525 aa7.14□□□□□ -1.27
RIF1-206ENST00000453091 GLYATL3Q5SZD4 288 aa7.14□□□□□ -1.27
RIF1-206ENST00000453091 PDSS1Q5T2R2 415 aa7.14□□□□□ -1.27
RIF1-206ENST00000453091 PRAMEF9Q5VWM5 478 aa7.14□□□□□ -1.27
RIF1-206ENST00000453091 ABHD17CQ6PCB6 329 aa7.14□□□□□ -1.27
RIF1-206ENST00000453091 SPRED2Q7Z698 418 aa7.14□□□□□ -1.27
RIF1-206ENST00000453091 EMC6Q9BV81 110 aa7.14□□□□□ -1.27
RIF1-206ENST00000453091 NXT1Q9UKK6 140 aaKnown RBP7.14□□□□□ -1.27
RIF1-206ENST00000453091 TO15178 435 aa7.14□□□□□ -1.27
RIF1-206ENST00000453091 TPMTP51580 245 aa7.14□□□□□ -1.27
RIF1-206ENST00000453091 EEF1A1P68104 462 aaKnown RBP7.14□□□□□ -1.27
RIF1-206ENST00000453091 CLEC12BQ2HXU8 276 aa7.14□□□□□ -1.27
RIF1-206ENST00000453091 TMEM88Q6PEY1 159 aa7.14□□□□□ -1.27
RIF1-206ENST00000453091 OR6V1Q8N148 313 aa7.14□□□□□ -1.27
RIF1-206ENST00000453091 OR51Q1Q8NH59 317 aa7.14□□□□□ -1.27
RIF1-206ENST00000453091 FAM213BQ8TBF2 198 aa7.14□□□□□ -1.27
RIF1-206ENST00000453091 TRMT2BQ96GJ1 504 aaKnown RBP7.14□□□□□ -1.27
RIF1-206ENST00000453091 ARPC5LQ9BPX5 153 aa7.14□□□□□ -1.27
RIF1-206ENST00000453091 C1QTNF6Q9BXI9 259 aa7.14□□□□□ -1.27
RIF1-206ENST00000453091 KLK11Q9UBX7 282 aa7.14□□□□□ -1.27
RIF1-206ENST00000453091 MED19A0JLT2 244 aaPredicted RBP7.14□□□□□ -1.27
RIF1-206ENST00000453091 SERINC4A6NH21 518 aa7.14□□□□□ -1.27
RIF1-206ENST00000453091 IDSB3KWA1 339 aa7.14□□□□□ -1.27
RIF1-206ENST00000453091 FPR3P25089 353 aa7.14□□□□□ -1.27
RIF1-206ENST00000453091 SLC6A12P48065 614 aa7.14□□□□□ -1.27
RIF1-206ENST00000453091 CLDN17P56750 224 aa7.14□□□□□ -1.27
RIF1-206ENST00000453091 ASAH1Q13510 395 aa7.14□□□□□ -1.27
RIF1-206ENST00000453091 GBX1Q14549 363 aa7.14□□□□□ -1.27
RIF1-206ENST00000453091 RBMS2Q15434 407 aaKnown RBP7.14□□□□□ -1.27
RIF1-206ENST00000453091 Q499Y3 187 aa7.14□□□□□ -1.27
RIF1-206ENST00000453091 FAM122CQ6P4D5 195 aa7.14□□□□□ -1.27
RIF1-206ENST00000453091 USP51Q70EK9 711 aa7.14□□□□□ -1.27
RIF1-206ENST00000453091 TPRA1Q86W33 373 aa7.14□□□□□ -1.27
RIF1-206ENST00000453091 ZNF100Q8IYN0 542 aa7.14□□□□□ -1.27
RIF1-206ENST00000453091 KCNK15Q9H427 330 aa7.14□□□□□ -1.27
RIF1-206ENST00000453091 EMC7Q9NPA0 242 aa7.14□□□□□ -1.27
RIF1-206ENST00000453091 FANCFQ9NPI8 374 aa7.14□□□□□ -1.27
RIF1-206ENST00000453091 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP7.14□□□□□ -1.271e-6■■■■□ 26.7
RIF1-206ENST00000453091 MRPS28Q9Y2Q9 187 aaKnown RBP7.14□□□□□ -1.27
RIF1-206ENST00000453091 SETD1AO15047 1707 aaKnown RBP7.13□□□□□ -1.27
RIF1-206ENST00000453091 RAB19A4D1S5 217 aa7.13□□□□□ -1.27
RIF1-206ENST00000453091 POM121BA6NF01 834 aa7.13□□□□□ -1.27
RIF1-206ENST00000453091 RGS11O94810 467 aa7.13□□□□□ -1.27
RIF1-206ENST00000453091 UBL3O95164 117 aa7.13□□□□□ -1.27
RIF1-206ENST00000453091 PEX11BO96011 259 aa7.13□□□□□ -1.27
RIF1-206ENST00000453091 IFNA17P01571 189 aa7.13□□□□□ -1.27
RIF1-206ENST00000453091 CTSLP07711 333 aa7.13□□□□□ -1.27
RIF1-206ENST00000453091 HIST1H1CP16403 213 aaKnown RBP7.13□□□□□ -1.27
RIF1-206ENST00000453091 CD6P30203 668 aa7.13□□□□□ -1.27
RIF1-206ENST00000453091 MRPL19P49406 292 aaKnown RBP7.13□□□□□ -1.27
RIF1-206ENST00000453091 PAN3Q58A45 887 aaKnown RBP7.13□□□□□ -1.27
RIF1-206ENST00000453091 FAM219AQ8IW50 185 aa7.13□□□□□ -1.27
RIF1-206ENST00000453091 OR4C15Q8NGM1 316 aa7.13□□□□□ -1.27
RIF1-206ENST00000453091 ZNF681Q96N22 645 aa7.13□□□□□ -1.27
RIF1-206ENST00000453091 FGF22Q9HCT0 170 aa7.13□□□□□ -1.27
RIF1-206ENST00000453091 WASF3Q9UPY6 502 aa7.13□□□□□ -1.27
RIF1-206ENST00000453091 SLC35A3Q9Y2D2 325 aa7.13□□□□□ -1.27
RIF1-206ENST00000453091 GPR55Q9Y2T6 319 aaPredicted RBP7.13□□□□□ -1.27
RIF1-206ENST00000453091 SLC34A2O95436 690 aa7.13□□□□□ -1.27
RIF1-206ENST00000453091 SRMP19623 302 aa7.13□□□□□ -1.27
RIF1-206ENST00000453091 CRABP1P29762 137 aa7.13□□□□□ -1.27
RIF1-206ENST00000453091 STK11Q15831 433 aa7.13□□□□□ -1.27
RIF1-206ENST00000453091 PLCXD3Q63HM9 321 aa7.13□□□□□ -1.27
RIF1-206ENST00000453091 ZNF440Q8IYI8 595 aa7.13□□□□□ -1.27
RIF1-206ENST00000453091 ZFAND1Q8TCF1 268 aa7.13□□□□□ -1.27
RIF1-206ENST00000453091 ISG20Q96AZ6 181 aaKnown RBP7.13□□□□□ -1.27
RIF1-206ENST00000453091 FAM3DQ96BQ1 224 aa7.13□□□□□ -1.27
RIF1-206ENST00000453091 MAP3K3Q99759 626 aa7.13□□□□□ -1.27
RIF1-206ENST00000453091 PSD2Q9BQI7 771 aa7.13□□□□□ -1.27
RIF1-206ENST00000453091 HRASLSQ9HDD0 168 aa7.13□□□□□ -1.27
RIF1-206ENST00000453091 CHD2O14647 1828 aaKnown RBP7.13□□□□□ -1.27
RIF1-206ENST00000453091 SULT2B1O00204 365 aa7.13□□□□□ -1.27
RIF1-206ENST00000453091 SLCO2B1O94956 709 aa7.13□□□□□ -1.27
RIF1-206ENST00000453091 RAP2BP61225 183 aa7.13□□□□□ -1.27
RIF1-206ENST00000453091 PPP2CBP62714 309 aa7.13□□□□□ -1.27
RIF1-206ENST00000453091 PPP2CAP67775 309 aa7.13□□□□□ -1.27
RIF1-206ENST00000453091 DUSP6Q16828 381 aa7.13□□□□□ -1.27
RIF1-206ENST00000453091 PHLDA2Q53GA4 152 aa7.13□□□□□ -1.27
RIF1-206ENST00000453091 MIB2Q96AX9 1013 aa7.13□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 55.8 ms