RNA–Protein interactions for RNA: ENST00000449062.1

RTFDC1-204, Transcript of Protein RTF2 homolog, humanhuman

TSL 5

Gene RTFDC1, Length 852 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-204ENST00000449062 UEVLDQ8IX04 471 aa12.29□□□□□ -0.44
RTFDC1-204ENST00000449062 FAM169BQ8N8A8 192 aa12.29□□□□□ -0.44
RTFDC1-204ENST00000449062 OR5J2Q8NH18 312 aa12.29□□□□□ -0.44
RTFDC1-204ENST00000449062 TMEM171Q8WVE6 324 aa12.29□□□□□ -0.44
RTFDC1-204ENST00000449062 LIPHQ8WWY8 451 aa12.29□□□□□ -0.44
RTFDC1-204ENST00000449062 FBXW5Q969U6 566 aa12.29□□□□□ -0.44
RTFDC1-204ENST00000449062 ALKBH3Q96Q83 286 aaPredicted RBP12.29□□□□□ -0.44
RTFDC1-204ENST00000449062 EMC6Q9BV81 110 aa12.29□□□□□ -0.44
RTFDC1-204ENST00000449062 ASPNQ9BXN1 380 aa12.29□□□□□ -0.44
RTFDC1-204ENST00000449062 POLR2J2Q9GZM3 115 aaKnown RBP12.29□□□□□ -0.44
RTFDC1-204ENST00000449062 POLR2J3Q9H1A7 115 aaKnown RBP12.29□□□□□ -0.44
RTFDC1-204ENST00000449062 OBP2BQ9NPH6 170 aa12.29□□□□□ -0.44
RTFDC1-204ENST00000449062 MED29Q9NX70 200 aa12.29□□□□□ -0.44
RTFDC1-204ENST00000449062 CRNNQ9UBG3 495 aaPredicted RBP12.29□□□□□ -0.44
RTFDC1-204ENST00000449062 ABCD2Q9UBJ2 740 aa12.29□□□□□ -0.44
RTFDC1-204ENST00000449062 SLC35F4A4IF30 521 aa12.28□□□□□ -0.44
RTFDC1-204ENST00000449062 NQO1P15559 274 aaKnown RBP12.28□□□□□ -0.44
RTFDC1-204ENST00000449062 CDH2P19022 906 aaPredicted RBP12.28□□□□□ -0.44
RTFDC1-204ENST00000449062 PRDX6P30041 224 aa12.28□□□□□ -0.44
RTFDC1-204ENST00000449062 GSK3BP49841 420 aa12.28□□□□□ -0.44
RTFDC1-204ENST00000449062 Q5PR19 223 aa12.28□□□□□ -0.44
RTFDC1-204ENST00000449062 KLHL17Q6TDP4 642 aa12.28□□□□□ -0.44
RTFDC1-204ENST00000449062 B3GLCTQ6Y288 498 aa12.28□□□□□ -0.44
RTFDC1-204ENST00000449062 ZNF627Q7L945 461 aa12.28□□□□□ -0.44
RTFDC1-204ENST00000449062 PIK3C3Q8NEB9 887 aa12.28□□□□□ -0.44
RTFDC1-204ENST00000449062 PERPQ96FX8 193 aa12.28□□□□□ -0.44
RTFDC1-204ENST00000449062 TRAF4Q9BUZ4 470 aaPredicted RBP12.28□□□□□ -0.44
RTFDC1-204ENST00000449062 FKRPQ9H9S5 495 aa12.28□□□□□ -0.44
RTFDC1-204ENST00000449062 CRLF2Q9HC73 371 aa12.28□□□□□ -0.44
RTFDC1-204ENST00000449062 ZNF229Q9UJW7 825 aa12.28□□□□□ -0.44
RTFDC1-204ENST00000449062 A4GNTQ9UNA3 340 aa12.28□□□□□ -0.44
RTFDC1-204ENST00000449062 MAGED1Q9Y5V3 778 aaPredicted RBP12.28□□□□□ -0.44
RTFDC1-204ENST00000449062 SNX13Q9Y5W8 968 aa12.28□□□□□ -0.44
RTFDC1-204ENST00000449062 FN1P02751 2386 aaKnown RBP12.28□□□□□ -0.44
RTFDC1-204ENST00000449062 ZNF503-AS2A6NEH8 195 aa12.27□□□□□ -0.45
RTFDC1-204ENST00000449062 M0R1B8 84 aa12.27□□□□□ -0.45
RTFDC1-204ENST00000449062 CXCR6O00574 342 aa12.27□□□□□ -0.45
RTFDC1-204ENST00000449062 FFAR1O14842 300 aa12.27□□□□□ -0.45
RTFDC1-204ENST00000449062 KRT33AO76009 404 aa12.27□□□□□ -0.45
RTFDC1-204ENST00000449062 IGLV1-44P01699 117 aa12.27□□□□□ -0.45
RTFDC1-204ENST00000449062 MT-ND1P03886 318 aa12.27□□□□□ -0.45
RTFDC1-204ENST00000449062 THRBP10828 461 aa12.27□□□□□ -0.45
RTFDC1-204ENST00000449062 RBM34P42696 430 aaKnown RBP12.27□□□□□ -0.45
RTFDC1-204ENST00000449062 UGT2B15P54855 530 aa12.27□□□□□ -0.45
RTFDC1-204ENST00000449062 SH3BGRP55822 239 aaPredicted RBP12.27□□□□□ -0.45
RTFDC1-204ENST00000449062 PSME3P61289 254 aa12.27□□□□□ -0.45
RTFDC1-204ENST00000449062 LSM11P83369 360 aaKnown RBP eCLIP12.27□□□□□ -0.45
RTFDC1-204ENST00000449062 POU3F1Q03052 451 aaPredicted RBP12.27□□□□□ -0.45
RTFDC1-204ENST00000449062 CEACAM16Q2WEN9 425 aa12.27□□□□□ -0.45
RTFDC1-204ENST00000449062 HMBOX1Q6NT76 420 aa12.27□□□□□ -0.45
RTFDC1-204ENST00000449062 CBLL1Q75N03 491 aa12.27□□□□□ -0.45
RTFDC1-204ENST00000449062 VTCN1Q7Z7D3 282 aa12.27□□□□□ -0.45
RTFDC1-204ENST00000449062 CPLX4Q7Z7G2 160 aa12.27□□□□□ -0.45
RTFDC1-204ENST00000449062 C10orf53Q8N6V4 93 aa12.27□□□□□ -0.45
RTFDC1-204ENST00000449062 TMEM255BQ8WV15 326 aa12.27□□□□□ -0.45
RTFDC1-204ENST00000449062 CMTM5Q96DZ9 223 aa12.27□□□□□ -0.45
RTFDC1-204ENST00000449062 CXorf56Q9H5V9 222 aa12.27□□□□□ -0.45
RTFDC1-204ENST00000449062 NANSQ9NR45 359 aa12.27□□□□□ -0.45
RTFDC1-204ENST00000449062 MAN2C1Q9NTJ4 1040 aa12.27□□□□□ -0.45
RTFDC1-204ENST00000449062 C20orf141Q9NUB4 165 aa12.27□□□□□ -0.45
RTFDC1-204ENST00000449062 B3GNT2Q9NY97 397 aa12.27□□□□□ -0.45
RTFDC1-204ENST00000449062 SONP18583 2426 aaKnown RBP12.27□□□□□ -0.45
RTFDC1-204ENST00000449062 A0A096LPE4 126 aa12.26□□□□□ -0.45
RTFDC1-204ENST00000449062 IGHV1-18A0A0C4DH31 117 aa12.26□□□□□ -0.45
RTFDC1-204ENST00000449062 A0A1W2PPZ6 126 aa12.26□□□□□ -0.45
RTFDC1-204ENST00000449062 PRSS23O95084 383 aa12.26□□□□□ -0.45
RTFDC1-204ENST00000449062 WNT11O96014 354 aa12.26□□□□□ -0.45
RTFDC1-204ENST00000449062 ADORA3P0DMS8 318 aa12.26□□□□□ -0.45
RTFDC1-204ENST00000449062 IFNGR1P15260 489 aa12.26□□□□□ -0.45
RTFDC1-204ENST00000449062 FUT1P19526 365 aa12.26□□□□□ -0.45
RTFDC1-204ENST00000449062 PAX7P23759 505 aa12.26□□□□□ -0.45
RTFDC1-204ENST00000449062 TTKP33981 857 aa12.26□□□□□ -0.45
RTFDC1-204ENST00000449062 CDH11P55287 796 aa12.26□□□□□ -0.45
RTFDC1-204ENST00000449062 RPS4XP62701 263 aaKnown RBP12.26□□□□□ -0.45
RTFDC1-204ENST00000449062 C3orf36Q3SXR2 165 aa12.26□□□□□ -0.45
RTFDC1-204ENST00000449062 LRRC23Q53EV4 343 aaPredicted RBP12.26□□□□□ -0.45
RTFDC1-204ENST00000449062 C11orf71Q6IPW1 123 aa12.26□□□□□ -0.45
RTFDC1-204ENST00000449062 LRFN4Q6PJG9 635 aa12.26□□□□□ -0.45
RTFDC1-204ENST00000449062 SLC22A25Q6T423 547 aa12.26□□□□□ -0.45
RTFDC1-204ENST00000449062 DEF8Q6ZN54 512 aa12.26□□□□□ -0.45
RTFDC1-204ENST00000449062 SLC35D2Q76EJ3 337 aa12.26□□□□□ -0.45
RTFDC1-204ENST00000449062 YTHDF3Q7Z739 585 aaKnown RBP12.26□□□□□ -0.45
RTFDC1-204ENST00000449062 CIARTQ8N365 385 aaPredicted RBP12.26□□□□□ -0.45
RTFDC1-204ENST00000449062 GPR137CQ8N3F9 429 aa12.26□□□□□ -0.45
RTFDC1-204ENST00000449062 OR6X1Q8NH79 312 aa12.26□□□□□ -0.45
RTFDC1-204ENST00000449062 PFN4Q8NHR9 129 aa12.26□□□□□ -0.45
RTFDC1-204ENST00000449062 TMEM54Q969K7 222 aa12.26□□□□□ -0.45
RTFDC1-204ENST00000449062 TPD52L3Q96J77 140 aa12.26□□□□□ -0.45
RTFDC1-204ENST00000449062 C18orf12Q96KH6 178 aa12.26□□□□□ -0.45
RTFDC1-204ENST00000449062 HS6ST2Q96MM7 605 aa12.26□□□□□ -0.45
RTFDC1-204ENST00000449062 DHRS9Q9BPW9 319 aa12.26□□□□□ -0.45
RTFDC1-204ENST00000449062 FAM107BQ9H098 131 aa12.26□□□□□ -0.45
RTFDC1-204ENST00000449062 GSX1Q9H4S2 264 aaPredicted RBP12.26□□□□□ -0.45
RTFDC1-204ENST00000449062 ALG2Q9H553 416 aa12.26□□□□□ -0.45
RTFDC1-204ENST00000449062 HIVEP2P31629 2446 aa12.25□□□□□ -0.45
RTFDC1-204ENST00000449062 ZNF99A8MXY4 864 aaPredicted RBP12.25□□□□□ -0.45
RTFDC1-204ENST00000449062 M0R3G1 203 aa12.25□□□□□ -0.45
RTFDC1-204ENST00000449062 KPNA4O00629 521 aaPredicted RBP12.25□□□□□ -0.45
RTFDC1-204ENST00000449062 OR7A10O76100 309 aa12.25□□□□□ -0.45
RTFDC1-204ENST00000449062 IGKV3-15P01624 115 aa12.25□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms