RNA–Protein interactions for RNA: ENST00000442842.5

TM9SF4-204, Transcript of transmembrane 9 superfamily member 4, humanhuman

TSL 4

Gene TM9SF4, Length 563 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF4-204ENST00000442842 TSPAN32Q96QS1 320 aa12.05□□□□□ -0.48
TM9SF4-204ENST00000442842 RBM4BQ9BQ04 359 aaKnown RBP12.05□□□□□ -0.48
TM9SF4-204ENST00000442842 EMC6Q9BV81 110 aa12.05□□□□□ -0.48
TM9SF4-204ENST00000442842 IFT27Q9BW83 186 aa12.05□□□□□ -0.48
TM9SF4-204ENST00000442842 RBM4Q9BWF3 364 aaKnown RBP12.05□□□□□ -0.48
TM9SF4-204ENST00000442842 SFXN3Q9BWM7 321 aa12.05□□□□□ -0.48
TM9SF4-204ENST00000442842 PLA2G12AQ9BZM1 189 aa12.05□□□□□ -0.48
TM9SF4-204ENST00000442842 COQ3Q9NZJ6 369 aa12.05□□□□□ -0.48
TM9SF4-204ENST00000442842 ERRFI1Q9UJM3 462 aaPredicted RBP12.05□□□□□ -0.48
TM9SF4-204ENST00000442842 RNF6Q9Y252 685 aa12.05□□□□□ -0.48
TM9SF4-204ENST00000442842 ORC6Q9Y5N6 252 aa12.05□□□□□ -0.48
TM9SF4-204ENST00000442842 MED12Q93074 2177 aa12.05□□□□□ -0.48
TM9SF4-204ENST00000442842 KIAA1549Q9HCM3 1950 aa12.05□□□□□ -0.48
TM9SF4-204ENST00000442842 RELNP78509 3460 aa12.05□□□□□ -0.48
TM9SF4-204ENST00000442842 FAM90A27PA6NNH2 459 aa12.04□□□□□ -0.48
TM9SF4-204ENST00000442842 AKAP8O43823 692 aaKnown RBP12.04□□□□□ -0.48
TM9SF4-204ENST00000442842 PTP4A3O75365 173 aa12.04□□□□□ -0.48
TM9SF4-204ENST00000442842 MRPL33O75394 65 aaKnown RBP12.04□□□□□ -0.48
TM9SF4-204ENST00000442842 TNFSF13O75888 250 aa12.04□□□□□ -0.48
TM9SF4-204ENST00000442842 TSPAN19P0C672 248 aa12.04□□□□□ -0.48
TM9SF4-204ENST00000442842 KIR2DL2P43627 348 aaPredicted RBP12.04□□□□□ -0.48
TM9SF4-204ENST00000442842 SELENOPP49908 381 aa12.04□□□□□ -0.48
TM9SF4-204ENST00000442842 ALDH3A2P51648 485 aa12.04□□□□□ -0.48
TM9SF4-204ENST00000442842 SMSP52788 366 aa12.04□□□□□ -0.48
TM9SF4-204ENST00000442842 PPP2R2BQ00005 443 aa12.04□□□□□ -0.48
TM9SF4-204ENST00000442842 SLC34A1Q06495 639 aa12.04□□□□□ -0.48
TM9SF4-204ENST00000442842 COX10Q12887 443 aa12.04□□□□□ -0.48
TM9SF4-204ENST00000442842 GUSBP1Q15486 140 aa12.04□□□□□ -0.48
TM9SF4-204ENST00000442842 ACKR1Q16570 336 aa12.04□□□□□ -0.48
TM9SF4-204ENST00000442842 RFX4Q33E94 735 aa12.04□□□□□ -0.48
TM9SF4-204ENST00000442842 ZNF100Q8IYN0 542 aa12.04□□□□□ -0.48
TM9SF4-204ENST00000442842 IQCF1Q8N6M8 205 aa12.04□□□□□ -0.48
TM9SF4-204ENST00000442842 DNAJC9Q8WXX5 260 aa12.04□□□□□ -0.48
TM9SF4-204ENST00000442842 TXNDC15Q96J42 360 aa12.04□□□□□ -0.48
TM9SF4-204ENST00000442842 ZNF570Q96NI8 536 aa12.04□□□□□ -0.48
TM9SF4-204ENST00000442842 ENKD1Q9H0I2 346 aa12.04□□□□□ -0.48
TM9SF4-204ENST00000442842 OPN3Q9H1Y3 402 aaPredicted RBP12.04□□□□□ -0.48
TM9SF4-204ENST00000442842 RIBC2Q9H4K1 309 aa12.04□□□□□ -0.48
TM9SF4-204ENST00000442842 GP6Q9HCN6 339 aa12.04□□□□□ -0.48
TM9SF4-204ENST00000442842 PROCRQ9UNN8 238 aa12.04□□□□□ -0.48
TM9SF4-204ENST00000442842 ADAM18Q9Y3Q7 739 aa12.04□□□□□ -0.48
TM9SF4-204ENST00000442842 ZNF407Q9C0G0 2248 aa12.04□□□□□ -0.48
TM9SF4-204ENST00000442842 TEX13CA0A0J9YWL9 993 aa12.03□□□□□ -0.48
TM9SF4-204ENST00000442842 ZNF726A6NNF4 738 aa12.03□□□□□ -0.48
TM9SF4-204ENST00000442842 DVL2O14641 736 aa12.03□□□□□ -0.48
TM9SF4-204ENST00000442842 MGRN1O60291 552 aa12.03□□□□□ -0.48
TM9SF4-204ENST00000442842 ZG16O60844 167 aa12.03□□□□□ -0.48
TM9SF4-204ENST00000442842 BCL10O95999 233 aa12.03□□□□□ -0.48
TM9SF4-204ENST00000442842 IGHV3-9P01782 118 aa12.03□□□□□ -0.48
TM9SF4-204ENST00000442842 CRHP06850 196 aa12.03□□□□□ -0.48
TM9SF4-204ENST00000442842 FREM3P0C091 2139 aa12.03□□□□□ -0.48
TM9SF4-204ENST00000442842 OSMP13725 252 aa12.03□□□□□ -0.48
TM9SF4-204ENST00000442842 EDNRAP25101 427 aa12.03□□□□□ -0.48
TM9SF4-204ENST00000442842 OPRM1P35372 400 aa12.03□□□□□ -0.48
TM9SF4-204ENST00000442842 RPS6KA3P51812 740 aa12.03□□□□□ -0.48
TM9SF4-204ENST00000442842 CAMK2DQ13557 499 aa12.03□□□□□ -0.48
TM9SF4-204ENST00000442842 RPL13AP3Q6NVV1 102 aa12.03□□□□□ -0.48
TM9SF4-204ENST00000442842 CD300LDQ6UXZ3 194 aa12.03□□□□□ -0.48
TM9SF4-204ENST00000442842 ZBTB49Q6ZSB9 765 aa12.03□□□□□ -0.48
TM9SF4-204ENST00000442842 LUZP2Q86TE4 346 aa12.03□□□□□ -0.48
TM9SF4-204ENST00000442842 WDFY1Q8IWB7 410 aa12.03□□□□□ -0.48
TM9SF4-204ENST00000442842 UBE2J2Q8N2K1 259 aa12.03□□□□□ -0.48
TM9SF4-204ENST00000442842 GALNT4Q8N4A0 578 aa12.03□□□□□ -0.48
TM9SF4-204ENST00000442842 ZIC4Q8N9L1 334 aa12.03□□□□□ -0.48
TM9SF4-204ENST00000442842 LRRC75AQ8NAA5 344 aa12.03□□□□□ -0.48
TM9SF4-204ENST00000442842 TMEM45BQ96B21 275 aa12.03□□□□□ -0.48
TM9SF4-204ENST00000442842 APH1AQ96BI3 265 aa12.03□□□□□ -0.48
TM9SF4-204ENST00000442842 RASD2Q96D21 266 aa12.03□□□□□ -0.48
TM9SF4-204ENST00000442842 ERMAPQ96PL5 475 aaPredicted RBP12.03□□□□□ -0.48
TM9SF4-204ENST00000442842 TSSK6Q9BXA6 273 aa12.03□□□□□ -0.48
TM9SF4-204ENST00000442842 OSBPL10Q9BXB5 764 aa12.03□□□□□ -0.48
TM9SF4-204ENST00000442842 FANCFQ9NPI8 374 aa12.03□□□□□ -0.48
TM9SF4-204ENST00000442842 REV1Q9UBZ9 1251 aa12.03□□□□□ -0.48
TM9SF4-204ENST00000442842 PRSS50Q9UI38 385 aa12.03□□□□□ -0.48
TM9SF4-204ENST00000442842 TMEFF2Q9UIK5 374 aaPredicted RBP12.03□□□□□ -0.48
TM9SF4-204ENST00000442842 ZNF346Q9UL40 294 aaKnown RBP12.03□□□□□ -0.48
TM9SF4-204ENST00000442842 IER3IP1Q9Y5U9 82 aa12.03□□□□□ -0.48
TM9SF4-204ENST00000442842 LOC102725191A0A1B0GVB3 256 aa12.02□□□□□ -0.49
TM9SF4-204ENST00000442842 SLC35F4A4IF30 521 aa12.02□□□□□ -0.49
TM9SF4-204ENST00000442842 H7C1C5 153 aa12.02□□□□□ -0.49
TM9SF4-204ENST00000442842 SLC43A1O75387 559 aa12.02□□□□□ -0.49
TM9SF4-204ENST00000442842 AGFG2O95081 481 aa12.02□□□□□ -0.49
TM9SF4-204ENST00000442842 IGHMP01871 453 aa12.02□□□□□ -0.49
TM9SF4-204ENST00000442842 TP53P04637 393 aaPredicted RBP12.02□□□□□ -0.49
TM9SF4-204ENST00000442842 ALPLP05186 524 aa12.02□□□□□ -0.49
TM9SF4-204ENST00000442842 CD14P08571 375 aa12.02□□□□□ -0.49
TM9SF4-204ENST00000442842 NOS3P29474 1203 aa12.02□□□□□ -0.49
TM9SF4-204ENST00000442842 CHRNB4P30926 498 aa12.02□□□□□ -0.49
TM9SF4-204ENST00000442842 ACVR1BP36896 505 aa12.02□□□□□ -0.49
TM9SF4-204ENST00000442842 RPL27P61353 136 aaKnown RBP12.02□□□□□ -0.49
TM9SF4-204ENST00000442842 LCN6P62502 163 aa12.02□□□□□ -0.49
TM9SF4-204ENST00000442842 LGALS3BPQ08380 585 aa12.02□□□□□ -0.49
TM9SF4-204ENST00000442842 KRR1Q13601 381 aaKnown RBP12.02□□□□□ -0.49
TM9SF4-204ENST00000442842 KDM4DQ6B0I6 523 aa12.02□□□□□ -0.49
TM9SF4-204ENST00000442842 DPY19L2P2Q6ZN68 376 aa12.02□□□□□ -0.49
TM9SF4-204ENST00000442842 BTLAQ7Z6A9 289 aa12.02□□□□□ -0.49
TM9SF4-204ENST00000442842 LIX1LQ8IVB5 337 aa12.02□□□□□ -0.49
TM9SF4-204ENST00000442842 CLDN22Q8N7P3 220 aa12.02□□□□□ -0.49
TM9SF4-204ENST00000442842 OR2T33Q8NG76 320 aa12.02□□□□□ -0.49
TM9SF4-204ENST00000442842 ASB10Q8WXI3 467 aa12.02□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms