RNA–Protein interactions for RNA: ENST00000440097.5

LIMD1-202, Transcript of LIM domains containing 1, humanhuman

TSL 5 BASIC

Gene LIMD1, Length 2,773 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD1-202ENST00000440097 RDH8Q9NYR8 311 aa12.91□□□□□ -0.34
LIMD1-202ENST00000440097 RABL2AQ9UBK7 228 aaPredicted RBP12.91□□□□□ -0.34
LIMD1-202ENST00000440097 LAMA5O15230 3695 aa12.9□□□□□ -0.34
LIMD1-202ENST00000440097 A0A1W2PQM1 296 aa12.9□□□□□ -0.34
LIMD1-202ENST00000440097 FRG2CA6NGY1 282 aa12.9□□□□□ -0.34
LIMD1-202ENST00000440097 HCRTR2O43614 444 aa12.9□□□□□ -0.34
LIMD1-202ENST00000440097 ICOSLGO75144 302 aa12.9□□□□□ -0.34
LIMD1-202ENST00000440097 SCRG1O75711 98 aa12.9□□□□□ -0.34
LIMD1-202ENST00000440097 IL33O95760 270 aa12.9□□□□□ -0.34
LIMD1-202ENST00000440097 IGKV3-11P04433 115 aa12.9□□□□□ -0.34
LIMD1-202ENST00000440097 GYPBP06028 91 aa12.9□□□□□ -0.34
LIMD1-202ENST00000440097 GUSBP08236 651 aa12.9□□□□□ -0.34
LIMD1-202ENST00000440097 MRPL3P09001 348 aaKnown RBP12.9□□□□□ -0.34
LIMD1-202ENST00000440097 DNASE1P24855 282 aa12.9□□□□□ -0.34
LIMD1-202ENST00000440097 SLC6A6P31641 620 aa12.9□□□□□ -0.34
LIMD1-202ENST00000440097 MAP2K6P52564 334 aa12.9□□□□□ -0.34
LIMD1-202ENST00000440097 SIRT6Q8N6T7 355 aa12.9□□□□□ -0.34
LIMD1-202ENST00000440097 FAM98AQ8NCA5 519 aaKnown RBP12.9□□□□□ -0.34
LIMD1-202ENST00000440097 OR14A16Q8NHC5 309 aa12.9□□□□□ -0.34
LIMD1-202ENST00000440097 DACT3Q96B18 629 aaPredicted RBP12.9□□□□□ -0.34
LIMD1-202ENST00000440097 SGTBQ96EQ0 304 aa12.9□□□□□ -0.34
LIMD1-202ENST00000440097 OR2M2Q96R28 347 aa12.9□□□□□ -0.34
LIMD1-202ENST00000440097 UBL7Q96S82 380 aaPredicted RBP12.9□□□□□ -0.34
LIMD1-202ENST00000440097 C1QTNF6Q9BXI9 259 aa12.9□□□□□ -0.34
LIMD1-202ENST00000440097 KHNYNO15037 678 aaKnown RBP12.9□□□□□ -0.34
LIMD1-202ENST00000440097 ZNF264O43296 627 aa12.9□□□□□ -0.34
LIMD1-202ENST00000440097 TCRBP04435 133 aa12.9□□□□□ -0.34
LIMD1-202ENST00000440097 BTN1A1Q13410 526 aa12.9□□□□□ -0.34
LIMD1-202ENST00000440097 CRMP1Q14194 572 aa12.9□□□□□ -0.34
LIMD1-202ENST00000440097 ARSKQ6UWY0 536 aa12.9□□□□□ -0.34
LIMD1-202ENST00000440097 APOOLQ6UXV4 268 aa12.9□□□□□ -0.34
LIMD1-202ENST00000440097 C9orf40Q8IXQ3 194 aa12.9□□□□□ -0.34
LIMD1-202ENST00000440097 MS4A15Q8N5U1 240 aa12.9□□□□□ -0.34
LIMD1-202ENST00000440097 SAMD12Q8N8I0 201 aa12.9□□□□□ -0.34
LIMD1-202ENST00000440097 BEST4Q8NFU0 473 aa12.9□□□□□ -0.34
LIMD1-202ENST00000440097 OR10H4Q8NGA5 316 aa12.9□□□□□ -0.34
LIMD1-202ENST00000440097 THAP3Q8WTV1 239 aaPredicted RBP12.9□□□□□ -0.34
LIMD1-202ENST00000440097 SPRYD4Q8WW59 207 aaPredicted RBP12.9□□□□□ -0.34
LIMD1-202ENST00000440097 ACOT12Q8WYK0 555 aa12.9□□□□□ -0.34
LIMD1-202ENST00000440097 HGDQ93099 445 aa12.9□□□□□ -0.34
LIMD1-202ENST00000440097 DNAJA3Q96EY1 480 aa12.9□□□□□ -0.34
LIMD1-202ENST00000440097 CMC2Q9NRP2 79 aa12.9□□□□□ -0.34
LIMD1-202ENST00000440097 FBXO9Q9UK97 447 aaPredicted RBP12.9□□□□□ -0.34
LIMD1-202ENST00000440097 FKBP7Q9Y680 259 aa12.9□□□□□ -0.34
LIMD1-202ENST00000440097 DMXL1Q9Y485 3027 aa12.9□□□□□ -0.35
LIMD1-202ENST00000440097 OIP5O43482 229 aa12.89□□□□□ -0.35
LIMD1-202ENST00000440097 TIAF1O95411 115 aa12.89□□□□□ -0.35
LIMD1-202ENST00000440097 HRGP04196 525 aa12.89□□□□□ -0.35
LIMD1-202ENST00000440097 CLUP10909 449 aa12.89□□□□□ -0.35
LIMD1-202ENST00000440097 ZXDAP98168 799 aa12.89□□□□□ -0.35
LIMD1-202ENST00000440097 EBPQ15125 230 aaKnown RBP12.89□□□□□ -0.35
LIMD1-202ENST00000440097 RNASE12Q5GAN4 147 aaKnown RBP12.89□□□□□ -0.35
LIMD1-202ENST00000440097 NIPAL3Q6P499 406 aa12.89□□□□□ -0.35
LIMD1-202ENST00000440097 LYPD4Q6UWN0 246 aa12.89□□□□□ -0.35
LIMD1-202ENST00000440097 WDR5BQ86VZ2 330 aa12.89□□□□□ -0.35
LIMD1-202ENST00000440097 LRRC28Q86X40 367 aaPredicted RBP12.89□□□□□ -0.35
LIMD1-202ENST00000440097 SLITRK4Q8IW52 837 aa12.89□□□□□ -0.35
LIMD1-202ENST00000440097 ZNF440Q8IYI8 595 aa12.89□□□□□ -0.35
LIMD1-202ENST00000440097 KLHL36Q8N4N3 616 aa12.89□□□□□ -0.35
LIMD1-202ENST00000440097 ZSCAN1Q8NBB4 408 aa12.89□□□□□ -0.35
LIMD1-202ENST00000440097 SLC38A9Q8NBW4 561 aa12.89□□□□□ -0.35
LIMD1-202ENST00000440097 TBL1XR1Q9BZK7 514 aa12.89□□□□□ -0.35
LIMD1-202ENST00000440097 SEMA5BQ9P283 1151 aa12.89□□□□□ -0.35
LIMD1-202ENST00000440097 RARRES3Q9UL19 164 aa12.89□□□□□ -0.35
LIMD1-202ENST00000440097 NUBP2Q9Y5Y2 271 aa12.89□□□□□ -0.35
LIMD1-202ENST00000440097 A0A087WUJ7 227 aa12.89□□□□□ -0.35
LIMD1-202ENST00000440097 A0A1W2PPL8 197 aa12.89□□□□□ -0.35
LIMD1-202ENST00000440097 GPR171O14626 319 aa12.89□□□□□ -0.35
LIMD1-202ENST00000440097 TPPPO94811 219 aa12.89□□□□□ -0.35
LIMD1-202ENST00000440097 GAAP10253 952 aa12.89□□□□□ -0.35
LIMD1-202ENST00000440097 GIFP27352 417 aa12.89□□□□□ -0.35
LIMD1-202ENST00000440097 PITPNBP48739 271 aa12.89□□□□□ -0.35
LIMD1-202ENST00000440097 YOD1Q5VVQ6 348 aaPredicted RBP12.89□□□□□ -0.35
LIMD1-202ENST00000440097 RHBDD2Q6NTF9 364 aa12.89□□□□□ -0.35
LIMD1-202ENST00000440097 MEPCEQ7L2J0 689 aaKnown RBP12.89□□□□□ -0.35
LIMD1-202ENST00000440097 KLBQ86Z14 1044 aa12.89□□□□□ -0.35
LIMD1-202ENST00000440097 OR52E2Q8NGJ4 325 aa12.89□□□□□ -0.35
LIMD1-202ENST00000440097 OR4K13Q8NH42 304 aa12.89□□□□□ -0.35
LIMD1-202ENST00000440097 RELTQ969Z4 430 aa12.89□□□□□ -0.35
LIMD1-202ENST00000440097 ADIPOR1Q96A54 375 aa12.89□□□□□ -0.35
LIMD1-202ENST00000440097 C3orf49Q96BT1 292 aa12.89□□□□□ -0.35
LIMD1-202ENST00000440097 ABHD1Q96SE0 405 aa12.89□□□□□ -0.35
LIMD1-202ENST00000440097 ZNF426Q9BUY5 554 aa12.89□□□□□ -0.35
LIMD1-202ENST00000440097 MCCC2Q9HCC0 563 aa12.89□□□□□ -0.35
LIMD1-202ENST00000440097 DLL4Q9NR61 685 aa12.89□□□□□ -0.35
LIMD1-202ENST00000440097 MAB21L2Q9Y586 359 aa12.89□□□□□ -0.35
LIMD1-202ENST00000440097 FER1L5A0AVI2 2057 aa12.89□□□□□ -0.35
LIMD1-202ENST00000440097 MEIKINA0A087WXM9 373 aa12.88□□□□□ -0.35
LIMD1-202ENST00000440097 IGHV5-10-1A0A0J9YXX1 117 aa12.88□□□□□ -0.35
LIMD1-202ENST00000440097 BLOC1S5-TXNDC5H3BN57 136 aa12.88□□□□□ -0.35
LIMD1-202ENST00000440097 PPM1BO75688 479 aa12.88□□□□□ -0.35
LIMD1-202ENST00000440097 TOXO94900 526 aa12.88□□□□□ -0.35
LIMD1-202ENST00000440097 IFNGP01579 166 aa12.88□□□□□ -0.35
LIMD1-202ENST00000440097 HEXBP07686 556 aa12.88□□□□□ -0.35
LIMD1-202ENST00000440097 PEPDP12955 493 aa12.88□□□□□ -0.35
LIMD1-202ENST00000440097 HOXA6P31267 233 aa12.88□□□□□ -0.35
LIMD1-202ENST00000440097 ST3GAL2Q16842 350 aa12.88□□□□□ -0.35
LIMD1-202ENST00000440097 NKAIN1Q4KMZ8 207 aa12.88□□□□□ -0.35
LIMD1-202ENST00000440097 WBP2NLQ6ICG8 309 aa12.88□□□□□ -0.35
LIMD1-202ENST00000440097 PWWP2BQ6NUJ5 590 aa12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 56.6 ms