RNA–Protein interactions for RNA: ENST00000438647.3

RAPGEF1-206, Transcript of Rap guanine nucleotide exchange factor 1, humanhuman

TSL 3

Gene RAPGEF1, Length 588 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF1-206ENST00000438647 ST3GAL3Q11203 375 aa21.66■■□□□ 1.06
RAPGEF1-206ENST00000438647 ZP4Q12836 540 aa21.66■■□□□ 1.06
RAPGEF1-206ENST00000438647 TBRG1Q3YBR2 411 aa21.66■■□□□ 1.06
RAPGEF1-206ENST00000438647 HIKESHIQ53FT3 197 aa21.66■■□□□ 1.06
RAPGEF1-206ENST00000438647 ANKRD16Q6P6B7 361 aa21.66■■□□□ 1.06
RAPGEF1-206ENST00000438647 CBLL1Q75N03 491 aa21.66■■□□□ 1.06
RAPGEF1-206ENST00000438647 LINGO2Q7L985 606 aa21.66■■□□□ 1.06
RAPGEF1-206ENST00000438647 NKAIN4Q8IVV8 208 aa21.66■■□□□ 1.06
RAPGEF1-206ENST00000438647 MAGEE2Q8TD90 523 aaPredicted RBP21.66■■□□□ 1.06
RAPGEF1-206ENST00000438647 TMEM239Q8WW34 195 aa21.66■■□□□ 1.06
RAPGEF1-206ENST00000438647 B3GAT2Q9NPZ5 323 aa21.66■■□□□ 1.06
RAPGEF1-206ENST00000438647 MEPEQ9NQ76 525 aaPredicted RBP21.66■■□□□ 1.06
RAPGEF1-206ENST00000438647 FAIMQ9NVQ4 179 aa21.66■■□□□ 1.06
RAPGEF1-206ENST00000438647 TEP1Q99973 2627 aaKnown RBP21.65■■□□□ 1.06
RAPGEF1-206ENST00000438647 SLC35F4A4IF30 521 aa21.65■■□□□ 1.06
RAPGEF1-206ENST00000438647 SHISA9B4DS77 424 aa21.65■■□□□ 1.06
RAPGEF1-206ENST00000438647 SERPINI2O75830 405 aa21.65■■□□□ 1.06
RAPGEF1-206ENST00000438647 ASAH2BP0C7U1 165 aa21.65■■□□□ 1.06
RAPGEF1-206ENST00000438647 CD99P14209 185 aa21.65■■□□□ 1.06
RAPGEF1-206ENST00000438647 SLC22A25Q6T423 547 aa21.65■■□□□ 1.06
RAPGEF1-206ENST00000438647 NANOGNBQ7Z5D8 188 aa21.65■■□□□ 1.06
RAPGEF1-206ENST00000438647 VTCN1Q7Z7D3 282 aa21.65■■□□□ 1.06
RAPGEF1-206ENST00000438647 SMAP2Q8WU79 429 aaPredicted RBP21.65■■□□□ 1.06
RAPGEF1-206ENST00000438647 TMEM255BQ8WV15 326 aa21.65■■□□□ 1.06
RAPGEF1-206ENST00000438647 IGFBPL1Q8WX77 278 aa21.65■■□□□ 1.06
RAPGEF1-206ENST00000438647 BCL2L2Q92843 193 aaPredicted RBP21.65■■□□□ 1.06
RAPGEF1-206ENST00000438647 FAM162AQ96A26 154 aa21.65■■□□□ 1.06
RAPGEF1-206ENST00000438647 EMC6Q9BV81 110 aa21.65■■□□□ 1.06
RAPGEF1-206ENST00000438647 GSX2Q9BZM3 304 aa21.65■■□□□ 1.06
RAPGEF1-206ENST00000438647 CRLF2Q9HC73 371 aa21.65■■□□□ 1.06
RAPGEF1-206ENST00000438647 GPR35Q9HC97 309 aa21.65■■□□□ 1.06
RAPGEF1-206ENST00000438647 MED29Q9NX70 200 aa21.65■■□□□ 1.06
RAPGEF1-206ENST00000438647 CISD1Q9NZ45 108 aaKnown RBP21.65■■□□□ 1.06
RAPGEF1-206ENST00000438647 ADA2Q9NZK5 511 aa21.65■■□□□ 1.06
RAPGEF1-206ENST00000438647 LAMP3Q9UQV4 416 aa21.65■■□□□ 1.06
RAPGEF1-206ENST00000438647 MED31Q9Y3C7 131 aa21.65■■□□□ 1.06
RAPGEF1-206ENST00000438647 ARID1AO14497 2285 aa21.65■■□□□ 1.06
RAPGEF1-206ENST00000438647 MED13LQ71F56 2210 aa21.65■■□□□ 1.06
RAPGEF1-206ENST00000438647 ZNF469Q96JG9 3925 aaPredicted RBP21.64■■□□□ 1.06
RAPGEF1-206ENST00000438647 C11orf98E9PRG8 122 aa21.64■■□□□ 1.05
RAPGEF1-206ENST00000438647 RNF13O43567 381 aa21.64■■□□□ 1.05
RAPGEF1-206ENST00000438647 GMNNO75496 209 aa21.64■■□□□ 1.05
RAPGEF1-206ENST00000438647 SERPINA1P01009 418 aa21.64■■□□□ 1.05
RAPGEF1-206ENST00000438647 RPS4XP62701 263 aaKnown RBP21.64■■□□□ 1.05
RAPGEF1-206ENST00000438647 SLC25A3Q00325 362 aa21.64■■□□□ 1.05
RAPGEF1-206ENST00000438647 IFI44LQ53G44 452 aa21.64■■□□□ 1.05
RAPGEF1-206ENST00000438647 CARD17Q5XLA6 110 aa21.64■■□□□ 1.05
RAPGEF1-206ENST00000438647 FKBP9P1Q75LS8 142 aa21.64■■□□□ 1.05
RAPGEF1-206ENST00000438647 C20orf196Q8IYI0 205 aa21.64■■□□□ 1.05
RAPGEF1-206ENST00000438647 NEUROG1Q92886 237 aa21.64■■□□□ 1.05
RAPGEF1-206ENST00000438647 ADAD1Q96M93 576 aaKnown RBP21.64■■□□□ 1.05
RAPGEF1-206ENST00000438647 TMUB1Q9BVT8 246 aa21.64■■□□□ 1.05
RAPGEF1-206ENST00000438647 C1QTNF6Q9BXI9 259 aa21.64■■□□□ 1.05
RAPGEF1-206ENST00000438647 TAS2R5Q9NYW4 299 aa21.64■■□□□ 1.05
RAPGEF1-206ENST00000438647 RPS6KA6Q9UK32 745 aa21.64■■□□□ 1.05
RAPGEF1-206ENST00000438647 POU2F3Q9UKI9 436 aa21.64■■□□□ 1.05
RAPGEF1-206ENST00000438647 A4GNTQ9UNA3 340 aa21.64■■□□□ 1.05
RAPGEF1-206ENST00000438647 ARPC4-TTLL3A0A0A6YYG9 625 aa21.63■■□□□ 1.05
RAPGEF1-206ENST00000438647 HTR3EA5X5Y0 456 aa21.63■■□□□ 1.05
RAPGEF1-206ENST00000438647 M0R3G1 203 aa21.63■■□□□ 1.05
RAPGEF1-206ENST00000438647 DANCRP0C864 163 aa21.63■■□□□ 1.05
RAPGEF1-206ENST00000438647 PAX1P15863 534 aa21.63■■□□□ 1.05
RAPGEF1-206ENST00000438647 UGT2B15P54855 530 aa21.63■■□□□ 1.05
RAPGEF1-206ENST00000438647 CEACAM16Q2WEN9 425 aa21.63■■□□□ 1.05
RAPGEF1-206ENST00000438647 PRSS57Q6UWY2 283 aa21.63■■□□□ 1.05
RAPGEF1-206ENST00000438647 NHLRC1Q6VVB1 395 aa21.63■■□□□ 1.05
RAPGEF1-206ENST00000438647 SLC46A3Q7Z3Q1 461 aa21.63■■□□□ 1.05
RAPGEF1-206ENST00000438647 LRRC17Q8N6Y2 441 aa21.63■■□□□ 1.05
RAPGEF1-206ENST00000438647 OR6N1Q8NGY5 312 aa21.63■■□□□ 1.05
RAPGEF1-206ENST00000438647 PFN4Q8NHR9 129 aa21.63■■□□□ 1.05
RAPGEF1-206ENST00000438647 SGTBQ96EQ0 304 aa21.63■■□□□ 1.05
RAPGEF1-206ENST00000438647 PERPQ96FX8 193 aa21.63■■□□□ 1.05
RAPGEF1-206ENST00000438647 TXNDC15Q96J42 360 aa21.63■■□□□ 1.05
RAPGEF1-206ENST00000438647 TAGLN3Q9UI15 199 aa21.63■■□□□ 1.05
RAPGEF1-206ENST00000438647 ZNF99A8MXY4 864 aaPredicted RBP21.62■■□□□ 1.05
RAPGEF1-206ENST00000438647 IFNGR1P15260 489 aa21.62■■□□□ 1.05
RAPGEF1-206ENST00000438647 PTH2RP49190 550 aa21.62■■□□□ 1.05
RAPGEF1-206ENST00000438647 ARF1P84077 181 aaKnown RBP21.62■■□□□ 1.05
RAPGEF1-206ENST00000438647 FOXD4Q12950 439 aaPredicted RBP21.62■■□□□ 1.05
RAPGEF1-206ENST00000438647 CAMK2DQ13557 499 aa21.62■■□□□ 1.05
RAPGEF1-206ENST00000438647 Q5PR19 223 aa21.62■■□□□ 1.05
RAPGEF1-206ENST00000438647 SLC35D2Q76EJ3 337 aa21.62■■□□□ 1.05
RAPGEF1-206ENST00000438647 OFCC1Q8IZS5 231 aa21.62■■□□□ 1.05
RAPGEF1-206ENST00000438647 ANKS4BQ8N8V4 417 aa21.62■■□□□ 1.05
RAPGEF1-206ENST00000438647 WFDC11Q8NEX6 87 aa21.62■■□□□ 1.05
RAPGEF1-206ENST00000438647 OR6X1Q8NH79 312 aa21.62■■□□□ 1.05
RAPGEF1-206ENST00000438647 HSH2DQ96JZ2 352 aa21.62■■□□□ 1.05
RAPGEF1-206ENST00000438647 FNDC11Q9BVV2 318 aa21.62■■□□□ 1.05
RAPGEF1-206ENST00000438647 ZNF701Q9NV72 531 aaPredicted RBP21.62■■□□□ 1.05
RAPGEF1-206ENST00000438647 NDE1Q9NXR1 346 aa21.62■■□□□ 1.05
RAPGEF1-206ENST00000438647 A0A096LPE4 126 aa21.61■■□□□ 1.05
RAPGEF1-206ENST00000438647 A0A1W2PPZ6 126 aa21.61■■□□□ 1.05
RAPGEF1-206ENST00000438647 BLOC1S5-TXNDC5H3BN57 136 aa21.61■■□□□ 1.05
RAPGEF1-206ENST00000438647 OR7A10O76100 309 aa21.61■■□□□ 1.05
RAPGEF1-206ENST00000438647 FUT1P19526 365 aa21.61■■□□□ 1.05
RAPGEF1-206ENST00000438647 CSNK1A1P48729 337 aa21.61■■□□□ 1.05
RAPGEF1-206ENST00000438647 BIDP55957 195 aa21.61■■□□□ 1.05
RAPGEF1-206ENST00000438647 CCDC36Q8IYA8 594 aa21.61■■□□□ 1.05
RAPGEF1-206ENST00000438647 PGAM4Q8N0Y7 254 aa21.61■■□□□ 1.05
RAPGEF1-206ENST00000438647 LIPHQ8WWY8 451 aa21.61■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms