RNA–Protein interactions for RNA: ENST00000438497.5

SCRN1-208, Transcript of secernin 1, humanhuman

TSL 4

Gene SCRN1, Length 560 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCRN1-208ENST00000438497 H3F3AP84243 136 aa7.42□□□□□ -1.22
SCRN1-208ENST00000438497 SF3A3Q12874 501 aaKnown RBP eCLIP7.42□□□□□ -1.22
SCRN1-208ENST00000438497 DAG1Q14118 895 aa7.42□□□□□ -1.22
SCRN1-208ENST00000438497 LASP1Q14847 261 aaKnown RBP7.42□□□□□ -1.22
SCRN1-208ENST00000438497 SLC17A1Q14916 467 aa7.42□□□□□ -1.22
SCRN1-208ENST00000438497 DNAL1Q4LDG9 190 aa7.42□□□□□ -1.22
SCRN1-208ENST00000438497 EXOSC6Q5RKV6 272 aaKnown RBP7.42□□□□□ -1.22
SCRN1-208ENST00000438497 ZNF678Q5SXM1 525 aa7.42□□□□□ -1.22
SCRN1-208ENST00000438497 DCST2Q5T1A1 773 aa7.42□□□□□ -1.22
SCRN1-208ENST00000438497 REP15Q6BDI9 236 aa7.42□□□□□ -1.22
SCRN1-208ENST00000438497 BLOC1S3Q6QNY0 202 aa7.42□□□□□ -1.22
SCRN1-208ENST00000438497 ADGRG3Q86Y34 549 aa7.42□□□□□ -1.22
SCRN1-208ENST00000438497 CENPSQ8N2Z9 138 aa7.42□□□□□ -1.22
SCRN1-208ENST00000438497 FAM169BQ8N8A8 192 aa7.42□□□□□ -1.22
SCRN1-208ENST00000438497 ICA1LQ8NDH6 482 aa7.42□□□□□ -1.22
SCRN1-208ENST00000438497 IL17RDQ8NFM7 739 aa7.42□□□□□ -1.22
SCRN1-208ENST00000438497 ZNF563Q8TA94 476 aa7.42□□□□□ -1.22
SCRN1-208ENST00000438497 YIPF5Q969M3 257 aa7.42□□□□□ -1.22
SCRN1-208ENST00000438497 FAM120BQ96EK7 910 aaKnown RBP7.42□□□□□ -1.22
SCRN1-208ENST00000438497 KCNA7Q96RP8 456 aa7.42□□□□□ -1.22
SCRN1-208ENST00000438497 ACTRT3Q9BYD9 372 aa7.42□□□□□ -1.22
SCRN1-208ENST00000438497 OR11A1Q9GZK7 315 aa7.42□□□□□ -1.22
SCRN1-208ENST00000438497 ZNF665Q9H7R5 613 aa7.42□□□□□ -1.22
SCRN1-208ENST00000438497 SEC61A2Q9H9S3 476 aa7.42□□□□□ -1.22
SCRN1-208ENST00000438497 ZMAT3Q9HA38 289 aaKnown RBP7.42□□□□□ -1.22
SCRN1-208ENST00000438497 C12orf10Q9HB07 376 aa7.42□□□□□ -1.22
SCRN1-208ENST00000438497 ACSS1Q9NUB1 689 aaPredicted RBP7.42□□□□□ -1.22
SCRN1-208ENST00000438497 ZCCHC3Q9NUD5 404 aaKnown RBP7.42□□□□□ -1.22
SCRN1-208ENST00000438497 OXSMQ9NWU1 459 aa7.42□□□□□ -1.22
SCRN1-208ENST00000438497 MKS1Q9NXB0 559 aa7.42□□□□□ -1.22
SCRN1-208ENST00000438497 PDP1Q9P0J1 537 aaPredicted RBP7.42□□□□□ -1.22
SCRN1-208ENST00000438497 CHRNA9Q9UGM1 479 aa7.42□□□□□ -1.22
SCRN1-208ENST00000438497 RAB26Q9ULW5 256 aa7.42□□□□□ -1.22
SCRN1-208ENST00000438497 CEPT1Q9Y6K0 416 aa7.42□□□□□ -1.22
SCRN1-208ENST00000438497 ARHGAP32A7KAX9 2087 aa7.42□□□□□ -1.22
SCRN1-208ENST00000438497 NUP214P35658 2090 aaPredicted RBP7.41□□□□□ -1.22
SCRN1-208ENST00000438497 ARPC4-TTLL3A0A0A6YYG9 625 aa7.41□□□□□ -1.22
SCRN1-208ENST00000438497 IGHV2OR16-5A0A0B4J2B6 119 aa7.41□□□□□ -1.22
SCRN1-208ENST00000438497 DNAJC9-AS1A6NH13 148 aa7.41□□□□□ -1.22
SCRN1-208ENST00000438497 M0QX08 132 aa7.41□□□□□ -1.22
SCRN1-208ENST00000438497 M0R233 179 aa7.41□□□□□ -1.22
SCRN1-208ENST00000438497 RGS13O14921 159 aa7.41□□□□□ -1.22
SCRN1-208ENST00000438497 ITM2AO43736 263 aa7.41□□□□□ -1.22
SCRN1-208ENST00000438497 CHEK2O96017 543 aa7.41□□□□□ -1.22
SCRN1-208ENST00000438497 CSTAP01040 98 aa7.41□□□□□ -1.22
SCRN1-208ENST00000438497 IGLV1-44P01699 117 aa7.41□□□□□ -1.22
SCRN1-208ENST00000438497 GSNP06396 782 aa7.41□□□□□ -1.22
SCRN1-208ENST00000438497 CELA3BP08861 270 aa7.41□□□□□ -1.22
SCRN1-208ENST00000438497 EFNA1P20827 205 aaPredicted RBP7.41□□□□□ -1.22
SCRN1-208ENST00000438497 IMPDH1P20839 514 aa7.41□□□□□ -1.22
SCRN1-208ENST00000438497 MDKP21741 143 aaPredicted RBP7.41□□□□□ -1.22
SCRN1-208ENST00000438497 RYKP34925 604 aa7.41□□□□□ -1.22
SCRN1-208ENST00000438497 ASMTP46597 345 aa7.41□□□□□ -1.22
SCRN1-208ENST00000438497 PLTPP55058 493 aa7.41□□□□□ -1.22
SCRN1-208ENST00000438497 PKNOX1P55347 436 aa7.41□□□□□ -1.22
SCRN1-208ENST00000438497 ACTR3P61158 418 aa7.41□□□□□ -1.22
SCRN1-208ENST00000438497 POU3F1Q03052 451 aaPredicted RBP7.41□□□□□ -1.22
SCRN1-208ENST00000438497 MVKQ03426 396 aa7.41□□□□□ -1.22
SCRN1-208ENST00000438497 SRSF4Q08170 494 aaKnown RBP7.41□□□□□ -1.22
SCRN1-208ENST00000438497 GPR68Q15743 365 aa7.41□□□□□ -1.22
SCRN1-208ENST00000438497 ZNF385BQ569K4 471 aa7.41□□□□□ -1.22
SCRN1-208ENST00000438497 PDZK1Q5T2W1 519 aa7.41□□□□□ -1.22
SCRN1-208ENST00000438497 KRT80Q6KB66 452 aa7.41□□□□□ -1.22
SCRN1-208ENST00000438497 DOK3Q7L591 496 aa7.41□□□□□ -1.22
SCRN1-208ENST00000438497 TMEM151AQ8N4L1 468 aa7.41□□□□□ -1.22
SCRN1-208ENST00000438497 ANKRD42Q8N9B4 389 aa7.41□□□□□ -1.22
SCRN1-208ENST00000438497 ZIC4Q8N9L1 334 aa7.41□□□□□ -1.22
SCRN1-208ENST00000438497 MAGEE2Q8TD90 523 aaPredicted RBP7.41□□□□□ -1.22
SCRN1-208ENST00000438497 MGARPQ8TDB4 240 aa7.41□□□□□ -1.22
SCRN1-208ENST00000438497 TAF15Q92804 592 aaKnown RBP eCLIP7.41□□□□□ -1.22
SCRN1-208ENST00000438497 PMM1Q92871 262 aa7.41□□□□□ -1.22
SCRN1-208ENST00000438497 SLC25A28Q96A46 364 aa7.41□□□□□ -1.22
SCRN1-208ENST00000438497 TMEM45BQ96B21 275 aa7.41□□□□□ -1.22
SCRN1-208ENST00000438497 PPCDCQ96CD2 204 aa7.41□□□□□ -1.22
SCRN1-208ENST00000438497 MAELQ96JY0 434 aaKnown RBP7.41□□□□□ -1.22
SCRN1-208ENST00000438497 AIFM2Q9BRQ8 373 aa7.41□□□□□ -1.22
SCRN1-208ENST00000438497 CCDC106Q9BWC9 280 aa7.41□□□□□ -1.22
SCRN1-208ENST00000438497 ZNF416Q9BWM5 594 aa7.41□□□□□ -1.22
SCRN1-208ENST00000438497 MRPL37Q9BZE1 423 aaKnown RBP7.41□□□□□ -1.22
SCRN1-208ENST00000438497 MMP27Q9H306 513 aa7.41□□□□□ -1.22
SCRN1-208ENST00000438497 REEP4Q9H6H4 257 aa7.41□□□□□ -1.22
SCRN1-208ENST00000438497 S100A14Q9HCY8 104 aa7.41□□□□□ -1.22
SCRN1-208ENST00000438497 ZDHHC2Q9UIJ5 367 aa7.41□□□□□ -1.22
SCRN1-208ENST00000438497 KMT2CQ8NEZ4 4911 aaKnown RBP7.4□□□□□ -1.22
SCRN1-208ENST00000438497 ZNF587BE7ETH6 402 aa7.4□□□□□ -1.22
SCRN1-208ENST00000438497 M0QZ24 198 aa7.4□□□□□ -1.22
SCRN1-208ENST00000438497 CASQ2O14958 399 aaPredicted RBP7.4□□□□□ -1.22
SCRN1-208ENST00000438497 TBX19O60806 448 aa7.4□□□□□ -1.22
SCRN1-208ENST00000438497 BAG2O95816 211 aa7.4□□□□□ -1.22
SCRN1-208ENST00000438497 IGKV3-15P01624 115 aa7.4□□□□□ -1.22
SCRN1-208ENST00000438497 RNASE1P07998 156 aaKnown RBP7.4□□□□□ -1.22
SCRN1-208ENST00000438497 NR4A1P22736 598 aa7.4□□□□□ -1.22
SCRN1-208ENST00000438497 OMGP23515 440 aa7.4□□□□□ -1.22
SCRN1-208ENST00000438497 GATA3P23771 443 aa7.4□□□□□ -1.22
SCRN1-208ENST00000438497 PCGF2P35227 344 aa7.4□□□□□ -1.22
SCRN1-208ENST00000438497 ARR3P36575 388 aa7.4□□□□□ -1.22
SCRN1-208ENST00000438497 FRKP42685 505 aaPredicted RBP7.4□□□□□ -1.22
SCRN1-208ENST00000438497 ALDH3B1P43353 468 aa7.4□□□□□ -1.22
SCRN1-208ENST00000438497 CCT3P49368 545 aaKnown RBP7.4□□□□□ -1.22
SCRN1-208ENST00000438497 MRPS11P82912 194 aaKnown RBP7.4□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms