RNA–Protein interactions for RNA: ENST00000438395.5

VPS50-204, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 3

Gene VPS50, Length 538 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-204ENST00000438395 BBS10Q8TAM1 723 aa6.75□□□□□ -1.33
VPS50-204ENST00000438395 MAGEE2Q8TD90 523 aaPredicted RBP6.75□□□□□ -1.33
VPS50-204ENST00000438395 BCL2L2Q92843 193 aaPredicted RBP6.75□□□□□ -1.33
VPS50-204ENST00000438395 SLC38A4Q969I6 547 aa6.75□□□□□ -1.33
VPS50-204ENST00000438395 ZBTB9Q96C00 473 aa6.75□□□□□ -1.33
VPS50-204ENST00000438395 FOXN4Q96NZ1 517 aa6.75□□□□□ -1.33
VPS50-204ENST00000438395 EPYCQ99645 322 aa6.75□□□□□ -1.33
VPS50-204ENST00000438395 SPATA5L1Q9BVQ7 753 aa6.75□□□□□ -1.33
VPS50-204ENST00000438395 LINC00470Q9BZP3 86 aa6.75□□□□□ -1.33
VPS50-204ENST00000438395 ZIM2Q9NZV7 527 aa6.75□□□□□ -1.33
VPS50-204ENST00000438395 USP22Q9UPT9 525 aa6.75□□□□□ -1.33
VPS50-204ENST00000438395 SPEF1Q9Y4P9 236 aa6.75□□□□□ -1.33
VPS50-204ENST00000438395 IGHV4-61A0A0C4DH41 118 aa6.74□□□□□ -1.33
VPS50-204ENST00000438395 SH3PXD2BA1X283 911 aa6.74□□□□□ -1.33
VPS50-204ENST00000438395 NR5A2O00482 541 aa6.74□□□□□ -1.33
VPS50-204ENST00000438395 ENTPD5O75356 428 aa6.74□□□□□ -1.33
VPS50-204ENST00000438395 UPK3AO75631 287 aa6.74□□□□□ -1.33
VPS50-204ENST00000438395 C1QCP02747 245 aa6.74□□□□□ -1.33
VPS50-204ENST00000438395 F13BP05160 661 aa6.74□□□□□ -1.33
VPS50-204ENST00000438395 PRG2P13727 222 aa6.74□□□□□ -1.33
VPS50-204ENST00000438395 DAOP14920 347 aa6.74□□□□□ -1.33
VPS50-204ENST00000438395 ZNF23P17027 643 aa6.74□□□□□ -1.33
VPS50-204ENST00000438395 PPIBP23284 216 aaKnown RBP6.74□□□□□ -1.33
VPS50-204ENST00000438395 APEX1P27695 318 aaKnown RBP6.74□□□□□ -1.33
VPS50-204ENST00000438395 IL12AP29459 219 aa6.74□□□□□ -1.33
VPS50-204ENST00000438395 THBS2P35442 1172 aa6.74□□□□□ -1.33
VPS50-204ENST00000438395 ACAA2P42765 397 aaKnown RBP6.74□□□□□ -1.33
VPS50-204ENST00000438395 RPS23P62266 143 aaKnown RBP6.74□□□□□ -1.33
VPS50-204ENST00000438395 HOXC5Q00444 222 aa6.74□□□□□ -1.33
VPS50-204ENST00000438395 LGALS3BPQ08380 585 aa6.74□□□□□ -1.33
VPS50-204ENST00000438395 FADDQ13158 208 aa6.74□□□□□ -1.33
VPS50-204ENST00000438395 SCGB2A2Q13296 93 aa6.74□□□□□ -1.33
VPS50-204ENST00000438395 SNTB2Q13425 540 aaKnown RBP6.74□□□□□ -1.33
VPS50-204ENST00000438395 MPP2Q14168 576 aa6.74□□□□□ -1.33
VPS50-204ENST00000438395 MFSD13AQ14CX5 517 aa6.74□□□□□ -1.33
VPS50-204ENST00000438395 EFNB3Q15768 340 aa6.74□□□□□ -1.33
VPS50-204ENST00000438395 C3orf36Q3SXR2 165 aa6.74□□□□□ -1.33
VPS50-204ENST00000438395 FAM69AQ5T7M9 428 aa6.74□□□□□ -1.33
VPS50-204ENST00000438395 GKAP1Q5VSY0 366 aaPredicted RBP6.74□□□□□ -1.33
VPS50-204ENST00000438395 UGT2A3Q6UWM9 527 aa6.74□□□□□ -1.33
VPS50-204ENST00000438395 IL17RELQ6ZVW7 336 aa6.74□□□□□ -1.33
VPS50-204ENST00000438395 UEVLDQ8IX04 471 aa6.74□□□□□ -1.33
VPS50-204ENST00000438395 CLIP4Q8N3C7 705 aa6.74□□□□□ -1.33
VPS50-204ENST00000438395 SVOPLQ8N434 492 aa6.74□□□□□ -1.33
VPS50-204ENST00000438395 ARIH2OSQ8N7S6 290 aa6.74□□□□□ -1.33
VPS50-204ENST00000438395 FAM169BQ8N8A8 192 aa6.74□□□□□ -1.33
VPS50-204ENST00000438395 NUP37Q8NFH4 326 aa6.74□□□□□ -1.33
VPS50-204ENST00000438395 IL17RDQ8NFM7 739 aa6.74□□□□□ -1.33
VPS50-204ENST00000438395 DNAJA4Q8WW22 397 aaPredicted RBP6.74□□□□□ -1.33
VPS50-204ENST00000438395 NEU4Q8WWR8 484 aaPredicted RBP6.74□□□□□ -1.33
VPS50-204ENST00000438395 SLC35B4Q969S0 331 aa6.74□□□□□ -1.33
VPS50-204ENST00000438395 VPS33AQ96AX1 596 aa6.74□□□□□ -1.33
VPS50-204ENST00000438395 MSI2Q96DH6 328 aaKnown RBP6.74□□□□□ -1.33
VPS50-204ENST00000438395 OXGR1Q96P68 337 aa6.74□□□□□ -1.33
VPS50-204ENST00000438395 C19orf24Q9BVV8 132 aa6.74□□□□□ -1.33
VPS50-204ENST00000438395 ASPNQ9BXN1 380 aa6.74□□□□□ -1.33
VPS50-204ENST00000438395 PARD6BQ9BYG5 372 aa6.74□□□□□ -1.33
VPS50-204ENST00000438395 BPESC1Q9GZL8 116 aa6.74□□□□□ -1.33
VPS50-204ENST00000438395 PLK3Q9H4B4 646 aa6.74□□□□□ -1.33
VPS50-204ENST00000438395 ZNF442Q9H7R0 627 aa6.74□□□□□ -1.33
VPS50-204ENST00000438395 CRLF2Q9HC73 371 aa6.74□□□□□ -1.33
VPS50-204ENST00000438395 A4GALTQ9NPC4 353 aa6.74□□□□□ -1.33
VPS50-204ENST00000438395 SDR39U1Q9NRG7 319 aaPredicted RBP6.74□□□□□ -1.33
VPS50-204ENST00000438395 HIF3AQ9Y2N7 669 aa6.74□□□□□ -1.33
VPS50-204ENST00000438395 CMAHPQ9Y471 501 aa6.74□□□□□ -1.33
VPS50-204ENST00000438395 CR1P17927 2039 aa6.73□□□□□ -1.33
VPS50-204ENST00000438395 TRAV36DV7A0A075B6V5 113 aa6.73□□□□□ -1.33
VPS50-204ENST00000438395 IGHV2OR16-5A0A0B4J2B6 119 aa6.73□□□□□ -1.33
VPS50-204ENST00000438395 PRORSD1PA6NEY8 169 aa6.73□□□□□ -1.33
VPS50-204ENST00000438395 ZNF726A6NNF4 738 aa6.73□□□□□ -1.33
VPS50-204ENST00000438395 M0R233 179 aa6.73□□□□□ -1.33
VPS50-204ENST00000438395 M0R3G1 203 aa6.73□□□□□ -1.33
VPS50-204ENST00000438395 CLIC1O00299 241 aa6.73□□□□□ -1.33
VPS50-204ENST00000438395 POLR3GO15318 223 aaPredicted RBP6.73□□□□□ -1.33
VPS50-204ENST00000438395 NPIPB7O75200 414 aa6.73□□□□□ -1.33
VPS50-204ENST00000438395 SNNO75324 88 aaPredicted RBP6.73□□□□□ -1.33
VPS50-204ENST00000438395 SERPINI2O75830 405 aa6.73□□□□□ -1.33
VPS50-204ENST00000438395 SEC14L2O76054 403 aa6.73□□□□□ -1.33
VPS50-204ENST00000438395 ZNF432O94892 652 aa6.73□□□□□ -1.33
VPS50-204ENST00000438395 RAB36O95755 333 aa6.73□□□□□ -1.33
VPS50-204ENST00000438395 IGLV1-44P01699 117 aa6.73□□□□□ -1.33
VPS50-204ENST00000438395 CD79AP11912 226 aa6.73□□□□□ -1.33
VPS50-204ENST00000438395 IFNGR1P15260 489 aa6.73□□□□□ -1.33
VPS50-204ENST00000438395 CBR1P16152 277 aa6.73□□□□□ -1.33
VPS50-204ENST00000438395 GRPRP30550 384 aa6.73□□□□□ -1.33
VPS50-204ENST00000438395 PRKAR1BP31321 381 aa6.73□□□□□ -1.33
VPS50-204ENST00000438395 THBS4P35443 961 aa6.73□□□□□ -1.33
VPS50-204ENST00000438395 RGS8P57771 180 aaPredicted RBP6.73□□□□□ -1.33
VPS50-204ENST00000438395 GALK2Q01415 458 aa6.73□□□□□ -1.33
VPS50-204ENST00000438395 DAG1Q14118 895 aa6.73□□□□□ -1.33
VPS50-204ENST00000438395 RGNQ15493 299 aa6.73□□□□□ -1.33
VPS50-204ENST00000438395 ADRM1Q16186 407 aa6.73□□□□□ -1.33
VPS50-204ENST00000438395 GSG1Q2KHT4 349 aa6.73□□□□□ -1.33
VPS50-204ENST00000438395 MST1LQ2TV78 715 aa6.73□□□□□ -1.33
VPS50-204ENST00000438395 CR1LQ2VPA4 569 aa6.73□□□□□ -1.33
VPS50-204ENST00000438395 CEACAM16Q2WEN9 425 aa6.73□□□□□ -1.33
VPS50-204ENST00000438395 TRMT5Q32P41 509 aaKnown RBP6.73□□□□□ -1.33
VPS50-204ENST00000438395 KRTAP24-1Q3LI83 254 aa6.73□□□□□ -1.33
VPS50-204ENST00000438395 GTDC1Q4AE62 458 aa6.73□□□□□ -1.33
VPS50-204ENST00000438395 ALG10BQ5I7T1 473 aa6.73□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms