RNA–Protein interactions for RNA: ENST00000436724.5

PTPRF-207, Transcript of protein tyrosine phosphatase, receptor type F, humanhuman

TSL 1 (best)

Gene PTPRF, Length 2,168 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRF-207ENST00000436724 NAA10P41227 235 aaPredicted RBP19.03■□□□□ 0.64
PTPRF-207ENST00000436724 KRR1Q13601 381 aaKnown RBP19.03■□□□□ 0.64
PTPRF-207ENST00000436724 OR7A5Q15622 319 aa19.03■□□□□ 0.64
PTPRF-207ENST00000436724 GLYR1Q49A26 553 aaPredicted RBP19.03■□□□□ 0.64
PTPRF-207ENST00000436724 ARMC4Q5T2S8 1044 aa19.03■□□□□ 0.64
PTPRF-207ENST00000436724 SLC22A10Q63ZE4 541 aa19.03■□□□□ 0.64
PTPRF-207ENST00000436724 OR6K6Q8NGW6 343 aa19.03■□□□□ 0.64
PTPRF-207ENST00000436724 MRGPRX4Q96LA9 322 aa19.03■□□□□ 0.64
PTPRF-207ENST00000436724 JAM3Q9BX67 310 aa19.03■□□□□ 0.64
PTPRF-207ENST00000436724 EXOSC4Q9NPD3 245 aaKnown RBP19.03■□□□□ 0.64
PTPRF-207ENST00000436724 HAO2Q9NYQ3 351 aa19.03■□□□□ 0.64
PTPRF-207ENST00000436724 SLC6A5Q9Y345 797 aa19.03■□□□□ 0.64
PTPRF-207ENST00000436724 DCTN6O00399 190 aa19.03■□□□□ 0.64
PTPRF-207ENST00000436724 OR2T1O43869 369 aa19.03■□□□□ 0.64
PTPRF-207ENST00000436724 F10P00742 488 aa19.03■□□□□ 0.64
PTPRF-207ENST00000436724 TFP02787 698 aa19.03■□□□□ 0.64
PTPRF-207ENST00000436724 SERPINA7P05543 415 aa19.03■□□□□ 0.64
PTPRF-207ENST00000436724 CPEP16870 476 aa19.03■□□□□ 0.64
PTPRF-207ENST00000436724 GTF2E2P29084 291 aaKnown RBP19.03■□□□□ 0.64
PTPRF-207ENST00000436724 PYCR1P32322 319 aa19.03■□□□□ 0.64
PTPRF-207ENST00000436724 S100A5P33763 92 aa19.03■□□□□ 0.64
PTPRF-207ENST00000436724 GABREP78334 506 aa19.03■□□□□ 0.64
PTPRF-207ENST00000436724 SLC25A53Q5H9E4 307 aa19.03■□□□□ 0.64
PTPRF-207ENST00000436724 ZNF322Q6U7Q0 402 aaPredicted RBP19.03■□□□□ 0.64
PTPRF-207ENST00000436724 PLCZ1Q86YW0 608 aa19.03■□□□□ 0.64
PTPRF-207ENST00000436724 PSMF1Q92530 271 aa19.03■□□□□ 0.64
PTPRF-207ENST00000436724 JSRP1Q96MG2 331 aaPredicted RBP19.03■□□□□ 0.64
PTPRF-207ENST00000436724 UBL7Q96S82 380 aaPredicted RBP19.03■□□□□ 0.64
PTPRF-207ENST00000436724 ANGPTL4Q9BY76 406 aa19.03■□□□□ 0.64
PTPRF-207ENST00000436724 SP140LQ9H930 580 aa19.03■□□□□ 0.64
PTPRF-207ENST00000436724 PEX16Q9Y5Y5 336 aa19.03■□□□□ 0.64
PTPRF-207ENST00000436724 CUL9Q8IWT3 2517 aa19.03■□□□□ 0.64
PTPRF-207ENST00000436724 PLPP3O14495 311 aa19.02■□□□□ 0.64
PTPRF-207ENST00000436724 DXOO77932 396 aaKnown RBP19.02■□□□□ 0.64
PTPRF-207ENST00000436724 TXNDC12O95881 172 aa19.02■□□□□ 0.64
PTPRF-207ENST00000436724 CRYBB2P43320 205 aa19.02■□□□□ 0.64
PTPRF-207ENST00000436724 PON3Q15166 354 aa19.02■□□□□ 0.64
PTPRF-207ENST00000436724 TIMM50Q3ZCQ8 353 aa19.02■□□□□ 0.64
PTPRF-207ENST00000436724 ACER2Q5QJU3 275 aa19.02■□□□□ 0.64
PTPRF-207ENST00000436724 SSX6Q7RTT6 188 aa19.02■□□□□ 0.64
PTPRF-207ENST00000436724 KLBQ86Z14 1044 aa19.02■□□□□ 0.64
PTPRF-207ENST00000436724 DDIT4LQ96D03 193 aa19.02■□□□□ 0.64
PTPRF-207ENST00000436724 PTGES2Q9H7Z7 377 aa19.02■□□□□ 0.64
PTPRF-207ENST00000436724 WDR70Q9NW82 654 aa19.02■□□□□ 0.64
PTPRF-207ENST00000436724 RPH3AQ9Y2J0 694 aaPredicted RBP19.02■□□□□ 0.64
PTPRF-207ENST00000436724 A0A1W2PQL4 384 aaPredicted RBP19.02■□□□□ 0.63
PTPRF-207ENST00000436724 HLA-DOBP13765 273 aa19.02■□□□□ 0.63
PTPRF-207ENST00000436724 PSMA1P25786 263 aaKnown RBP19.02■□□□□ 0.63
PTPRF-207ENST00000436724 NBL1P41271 181 aa19.02■□□□□ 0.63
PTPRF-207ENST00000436724 TGIF1Q15583 401 aa19.02■□□□□ 0.63
PTPRF-207ENST00000436724 H3F3CQ6NXT2 135 aa19.02■□□□□ 0.63
PTPRF-207ENST00000436724 C5orf46Q6UWT4 87 aa19.02■□□□□ 0.63
PTPRF-207ENST00000436724 IL22RA1Q8N6P7 574 aa19.02■□□□□ 0.63
PTPRF-207ENST00000436724 OR52N1Q8NH53 320 aa19.02■□□□□ 0.63
PTPRF-207ENST00000436724 NKD1Q969G9 470 aa19.02■□□□□ 0.63
PTPRF-207ENST00000436724 ITFG2Q969R8 447 aa19.02■□□□□ 0.63
PTPRF-207ENST00000436724 THOC3Q96J01 351 aaKnown RBP19.02■□□□□ 0.63
PTPRF-207ENST00000436724 SRA1Q9HD15 236 aaKnown RBP19.02■□□□□ 0.63
PTPRF-207ENST00000436724 ARHGEF9O43307 516 aa19.01■□□□□ 0.63
PTPRF-207ENST00000436724 ZNF208O43345 1280 aa19.01■□□□□ 0.63
PTPRF-207ENST00000436724 SELENOFO60613 162 aa19.01■□□□□ 0.63
PTPRF-207ENST00000436724 ZNF85Q03923 595 aa19.01■□□□□ 0.63
PTPRF-207ENST00000436724 ACKR1Q16570 336 aa19.01■□□□□ 0.63
PTPRF-207ENST00000436724 TMEM81Q6P7N7 255 aa19.01■□□□□ 0.63
PTPRF-207ENST00000436724 SACM1LQ9NTJ5 587 aa19.01■□□□□ 0.63
PTPRF-207ENST00000436724 A0A0G2JMM0 328 aa19■□□□□ 0.63
PTPRF-207ENST00000436724 A0A1W2PPB8 328 aa19■□□□□ 0.63
PTPRF-207ENST00000436724 A0A1W2PRS3 328 aa19■□□□□ 0.63
PTPRF-207ENST00000436724 KIR3DP1A8MWS1 328 aa19■□□□□ 0.63
PTPRF-207ENST00000436724 MAGEB4O15481 346 aaPredicted RBP19■□□□□ 0.63
PTPRF-207ENST00000436724 OR6A2O95222 327 aa19■□□□□ 0.63
PTPRF-207ENST00000436724 ETV6P41212 452 aa19■□□□□ 0.63
PTPRF-207ENST00000436724 DIO1P49895 249 aa19■□□□□ 0.63
PTPRF-207ENST00000436724 RPS25P62851 125 aaKnown RBP19■□□□□ 0.63
PTPRF-207ENST00000436724 GALEQ14376 348 aa19■□□□□ 0.63
PTPRF-207ENST00000436724 LINC01590Q5TEZ4 76 aa19■□□□□ 0.63
PTPRF-207ENST00000436724 BEST3Q8N1M1 668 aa19■□□□□ 0.63
PTPRF-207ENST00000436724 EXD3Q8N9H8 876 aa19■□□□□ 0.63
PTPRF-207ENST00000436724 POC5Q8NA72 575 aa19■□□□□ 0.63
PTPRF-207ENST00000436724 ADAMTS17Q8TE56 1095 aa19■□□□□ 0.63
PTPRF-207ENST00000436724 TM9SF2Q99805 663 aa19■□□□□ 0.63
PTPRF-207ENST00000436724 SYT4Q9H2B2 425 aa19■□□□□ 0.63
PTPRF-207ENST00000436724 MRPL39Q9NYK5 338 aaKnown RBP19■□□□□ 0.63
PTPRF-207ENST00000436724 CAB39Q9Y376 341 aaPredicted RBP19■□□□□ 0.63
PTPRF-207ENST00000436724 LOC400499M0QZD8 3231 aa19■□□□□ 0.63
PTPRF-207ENST00000436724 CTDSP2O14595 271 aa19■□□□□ 0.63
PTPRF-207ENST00000436724 ATP6V1G1O75348 118 aa19■□□□□ 0.63
PTPRF-207ENST00000436724 CELP19835 753 aa19■□□□□ 0.63
PTPRF-207ENST00000436724 SHC1P29353 583 aa19■□□□□ 0.63
PTPRF-207ENST00000436724 SOX6P35712 828 aa19■□□□□ 0.63
PTPRF-207ENST00000436724 MYBPHQ13203 477 aa19■□□□□ 0.63
PTPRF-207ENST00000436724 TPBGQ13641 420 aa19■□□□□ 0.63
PTPRF-207ENST00000436724 EMC4Q5J8M3 183 aa19■□□□□ 0.63
PTPRF-207ENST00000436724 CCDC190Q86UF4 302 aa19■□□□□ 0.63
PTPRF-207ENST00000436724 ZNF511Q8NB15 262 aa19■□□□□ 0.63
PTPRF-207ENST00000436724 MFSD8Q8NHS3 518 aa19■□□□□ 0.63
PTPRF-207ENST00000436724 HTRA1Q92743 480 aa19■□□□□ 0.63
PTPRF-207ENST00000436724 UFD1Q92890 307 aa19■□□□□ 0.63
PTPRF-207ENST00000436724 CNN2Q99439 309 aaKnown RBP19■□□□□ 0.63
PTPRF-207ENST00000436724 ALG12Q9BV10 488 aa19■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 58.1 ms