RNA–Protein interactions for RNA: ENST00000433394.1

USP54-206, Transcript of ubiquitin specific peptidase 54, humanhuman

TSL 5

Gene USP54, Length 600 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP54-206ENST00000433394 SMAD5-AS1Q9Y6J3 95 aa4.37□□□□□ -1.71
USP54-206ENST00000433394 BCORL1Q5H9F3 1711 aa4.37□□□□□ -1.71
USP54-206ENST00000433394 RAB3GAP2Q9H2M9 1393 aa4.37□□□□□ -1.71
USP54-206ENST00000433394 ANKRD50Q9ULJ7 1429 aa4.37□□□□□ -1.71
USP54-206ENST00000433394 ZMYM4Q5VZL5 1548 aa4.36□□□□□ -1.71
USP54-206ENST00000433394 KDM5DQ9BY66 1539 aa4.36□□□□□ -1.71
USP54-206ENST00000433394 INO80Q9ULG1 1556 aaPredicted RBP4.36□□□□□ -1.71
USP54-206ENST00000433394 NSG1A0A0A6YYJ2 146 aa4.36□□□□□ -1.71
USP54-206ENST00000433394 A0A0G2JRQ6 117 aa4.36□□□□□ -1.71
USP54-206ENST00000433394 LSM1O15116 133 aaKnown RBP4.36□□□□□ -1.71
USP54-206ENST00000433394 HDAC3O15379 428 aa4.36□□□□□ -1.71
USP54-206ENST00000433394 MGRN1O60291 552 aa4.36□□□□□ -1.71
USP54-206ENST00000433394 TMEM50AO95807 157 aa4.36□□□□□ -1.71
USP54-206ENST00000433394 HPGDP15428 266 aa4.36□□□□□ -1.71
USP54-206ENST00000433394 ZNF24P17028 368 aa4.36□□□□□ -1.71
USP54-206ENST00000433394 CXCR2P25025 360 aa4.36□□□□□ -1.71
USP54-206ENST00000433394 PRDX3P30048 256 aaKnown RBP4.36□□□□□ -1.71
USP54-206ENST00000433394 FDFT1P37268 417 aa4.36□□□□□ -1.71
USP54-206ENST00000433394 TNNT2P45379 298 aaPredicted RBP4.36□□□□□ -1.71
USP54-206ENST00000433394 GSSP48637 474 aa4.36□□□□□ -1.71
USP54-206ENST00000433394 RIPPLY3P57055 190 aa4.36□□□□□ -1.71
USP54-206ENST00000433394 PLP1P60201 277 aa4.36□□□□□ -1.71
USP54-206ENST00000433394 EGFEM1PQ0D2K5 195 aa4.36□□□□□ -1.71
USP54-206ENST00000433394 SRSF5Q13243 272 aaKnown RBP4.36□□□□□ -1.71
USP54-206ENST00000433394 ARHGAP19Q14CB8 494 aa4.36□□□□□ -1.71
USP54-206ENST00000433394 VPS26BQ4G0F5 336 aa4.36□□□□□ -1.71
USP54-206ENST00000433394 GPRC6AQ5T6X5 926 aa4.36□□□□□ -1.71
USP54-206ENST00000433394 PSTKQ8IV42 348 aaKnown RBP4.36□□□□□ -1.71
USP54-206ENST00000433394 LINC00612Q8N6U2 182 aa4.36□□□□□ -1.71
USP54-206ENST00000433394 OR4F6Q8NGB9 312 aa4.36□□□□□ -1.71
USP54-206ENST00000433394 OR52K2Q8NGK3 314 aa4.36□□□□□ -1.71
USP54-206ENST00000433394 RAB3IL1Q8TBN0 382 aa4.36□□□□□ -1.71
USP54-206ENST00000433394 CHCHD10Q8WYQ3 142 aaPredicted RBP4.36□□□□□ -1.71
USP54-206ENST00000433394 MCUR1Q96AQ8 359 aa4.36□□□□□ -1.71
USP54-206ENST00000433394 KCTD14Q9BQ13 255 aaPredicted RBP4.36□□□□□ -1.71
USP54-206ENST00000433394 GPR61Q9BZJ8 451 aa4.36□□□□□ -1.71
USP54-206ENST00000433394 ZFP14Q9HCL3 533 aa4.36□□□□□ -1.71
USP54-206ENST00000433394 TP53TG3Q9ULZ0 132 aa4.36□□□□□ -1.71
USP54-206ENST00000433394 KIF15Q9NS87 1388 aa4.36□□□□□ -1.71
USP54-206ENST00000433394 DENND4BO75064 1496 aaPredicted RBP4.36□□□□□ -1.71
USP54-206ENST00000433394 ATP7AQ04656 1500 aa4.36□□□□□ -1.71
USP54-206ENST00000433394 ZFYVE16Q7Z3T8 1539 aa4.36□□□□□ -1.71
USP54-206ENST00000433394 HECW2Q9P2P5 1572 aa4.36□□□□□ -1.71
USP54-206ENST00000433394 REREQ9P2R6 1566 aa4.36□□□□□ -1.71
USP54-206ENST00000433394 KIF13AQ9H1H9 1805 aa4.35□□□□□ -1.71
USP54-206ENST00000433394 DLGAP1O14490 977 aa4.35□□□□□ -1.71
USP54-206ENST00000433394 RNF13O43567 381 aa4.35□□□□□ -1.71
USP54-206ENST00000433394 ZNF780AO75290 641 aaPredicted RBP4.35□□□□□ -1.71
USP54-206ENST00000433394 SRSF10O75494 262 aaKnown RBP4.35□□□□□ -1.71
USP54-206ENST00000433394 UPK3AO75631 287 aa4.35□□□□□ -1.71
USP54-206ENST00000433394 OR7A10O76100 309 aa4.35□□□□□ -1.71
USP54-206ENST00000433394 FGF1P05230 155 aa4.35□□□□□ -1.71
USP54-206ENST00000433394 GIG44P09565 113 aaPredicted RBP4.35□□□□□ -1.71
USP54-206ENST00000433394 STX17P56962 302 aa4.35□□□□□ -1.71
USP54-206ENST00000433394 RPS14P62263 151 aaKnown RBP4.35□□□□□ -1.71
USP54-206ENST00000433394 TGFBR3Q03167 851 aa4.35□□□□□ -1.71
USP54-206ENST00000433394 GK3PQ14409 553 aa4.35□□□□□ -1.71
USP54-206ENST00000433394 ZNF77Q15935 545 aa4.35□□□□□ -1.71
USP54-206ENST00000433394 XKR7Q5GH72 579 aa4.35□□□□□ -1.71
USP54-206ENST00000433394 OR2G6Q5TZ20 316 aa4.35□□□□□ -1.71
USP54-206ENST00000433394 PRAMEF20Q5VT98 475 aa4.35□□□□□ -1.71
USP54-206ENST00000433394 OR6C4Q8NGE1 309 aa4.35□□□□□ -1.71
USP54-206ENST00000433394 GPR151Q8TDV0 419 aa4.35□□□□□ -1.71
USP54-206ENST00000433394 TSG101Q99816 390 aa4.35□□□□□ -1.71
USP54-206ENST00000433394 PELOQ9BRX2 385 aaKnown RBP4.35□□□□□ -1.71
USP54-206ENST00000433394 EXD2Q9NVH0 621 aa4.35□□□□□ -1.71
USP54-206ENST00000433394 ADAM22Q9P0K1 906 aa4.35□□□□□ -1.71
USP54-206ENST00000433394 PTPRKQ15262 1439 aa4.35□□□□□ -1.71
USP54-206ENST00000433394 SCAPERQ9BY12 1400 aa4.35□□□□□ -1.71
USP54-206ENST00000433394 UNC13BO14795 1591 aa4.35□□□□□ -1.71
USP54-206ENST00000433394 DEPDC5O75140 1603 aa4.35□□□□□ -1.71
USP54-206ENST00000433394 RICTORQ6R327 1708 aa4.35□□□□□ -1.71
USP54-206ENST00000433394 FRMPD3Q5JV73 1810 aa4.35□□□□□ -1.71
USP54-206ENST00000433394 A0A0J9YXY3 114 aa4.34□□□□□ -1.71
USP54-206ENST00000433394 GFYI3L273 518 aa4.34□□□□□ -1.71
USP54-206ENST00000433394 TCN1P20061 433 aaPredicted RBP4.34□□□□□ -1.71
USP54-206ENST00000433394 NPR2P20594 1047 aa4.34□□□□□ -1.71
USP54-206ENST00000433394 FMO3P31513 532 aa4.34□□□□□ -1.71
USP54-206ENST00000433394 RORAP35398 523 aa4.34□□□□□ -1.71
USP54-206ENST00000433394 ATP5C1P36542 298 aaKnown RBP4.34□□□□□ -1.71
USP54-206ENST00000433394 SYKP43405 635 aa4.34□□□□□ -1.71
USP54-206ENST00000433394 UGT2B15P54855 530 aa4.34□□□□□ -1.71
USP54-206ENST00000433394 PRMT2P55345 433 aa4.34□□□□□ -1.71
USP54-206ENST00000433394 KRTAP10-7P60409 375 aaPredicted RBP4.34□□□□□ -1.71
USP54-206ENST00000433394 CCNA1P78396 465 aa4.34□□□□□ -1.71
USP54-206ENST00000433394 SPANXN2Q5MJ10 180 aa4.34□□□□□ -1.71
USP54-206ENST00000433394 C1orf100Q5SVJ3 147 aa4.34□□□□□ -1.71
USP54-206ENST00000433394 RNF165Q6ZSG1 346 aa4.34□□□□□ -1.71
USP54-206ENST00000433394 PEX26Q7Z412 305 aa4.34□□□□□ -1.71
USP54-206ENST00000433394 ZNF546Q86UE3 836 aa4.34□□□□□ -1.71
USP54-206ENST00000433394 OTUD6BQ8N6M0 293 aa4.34□□□□□ -1.71
USP54-206ENST00000433394 SDR9C7Q8NEX9 313 aa4.34□□□□□ -1.71
USP54-206ENST00000433394 OR2G2Q8NGZ5 317 aa4.34□□□□□ -1.71
USP54-206ENST00000433394 FAM81AQ8TBF8 368 aa4.34□□□□□ -1.71
USP54-206ENST00000433394 ZNF564Q8TBZ8 553 aaPredicted RBP4.34□□□□□ -1.71
USP54-206ENST00000433394 FANK1Q8TC84 345 aa4.34□□□□□ -1.71
USP54-206ENST00000433394 PIBF1Q8WXW3 757 aa4.34□□□□□ -1.71
USP54-206ENST00000433394 ITCHQ96J02 903 aa4.34□□□□□ -1.71
USP54-206ENST00000433394 OXGR1Q96P68 337 aa4.34□□□□□ -1.71
USP54-206ENST00000433394 SORT1Q99523 831 aa4.34□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 109.3 ms