RNA–Protein interactions for RNA: ENST00000428962.2

THBS3-202, Transcript of thrombospondin 3, humanhuman

TSL 2

Gene THBS3, Length 1,833 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THBS3-202ENST00000428962 TMEM72A0PK05 275 aa12.41□□□□□ -0.42
THBS3-202ENST00000428962 FAM172BPA6NC97 362 aa12.41□□□□□ -0.42
THBS3-202ENST00000428962 RGS13O14921 159 aa12.41□□□□□ -0.42
THBS3-202ENST00000428962 EEF1E1O43324 174 aaKnown RBP12.41□□□□□ -0.42
THBS3-202ENST00000428962 SNRPBP14678 240 aaKnown RBP12.41□□□□□ -0.42
THBS3-202ENST00000428962 PRKCAP17252 672 aa12.41□□□□□ -0.42
THBS3-202ENST00000428962 SRMP19623 302 aa12.41□□□□□ -0.42
THBS3-202ENST00000428962 SLC6A1P30531 599 aa12.41□□□□□ -0.42
THBS3-202ENST00000428962 CENPAP49450 140 aa12.41□□□□□ -0.42
THBS3-202ENST00000428962 MMP15P51511 669 aa12.41□□□□□ -0.42
THBS3-202ENST00000428962 BTG1P62324 171 aa12.41□□□□□ -0.42
THBS3-202ENST00000428962 EGR3Q06889 387 aa12.41□□□□□ -0.42
THBS3-202ENST00000428962 EFR3AQ14156 821 aa12.41□□□□□ -0.42
THBS3-202ENST00000428962 GPR176Q14439 515 aa12.41□□□□□ -0.42
THBS3-202ENST00000428962 SGCBQ16585 318 aa12.41□□□□□ -0.42
THBS3-202ENST00000428962 EEF1A1P5Q5VTE0 462 aa12.41□□□□□ -0.42
THBS3-202ENST00000428962 RHBDD2Q6NTF9 364 aa12.41□□□□□ -0.42
THBS3-202ENST00000428962 RABEPKQ7Z6M1 372 aa12.41□□□□□ -0.42
THBS3-202ENST00000428962 EDAQ92838 391 aa12.41□□□□□ -0.42
THBS3-202ENST00000428962 CCDC74AQ96AQ1 378 aa12.41□□□□□ -0.42
THBS3-202ENST00000428962 INTS14Q96SY0 518 aa12.41□□□□□ -0.42
THBS3-202ENST00000428962 RTN4RQ9BZR6 473 aa12.41□□□□□ -0.42
THBS3-202ENST00000428962 SRA1Q9HD15 236 aaKnown RBP12.41□□□□□ -0.42
THBS3-202ENST00000428962 CAMK2AQ9UQM7 478 aa12.41□□□□□ -0.42
THBS3-202ENST00000428962 ADAMTS20P59510 1910 aa12.41□□□□□ -0.42
THBS3-202ENST00000428962 OR6C70A6NIJ9 312 aa12.41□□□□□ -0.42
THBS3-202ENST00000428962 A8MV72 311 aaPredicted RBP12.41□□□□□ -0.42
THBS3-202ENST00000428962 INMT-MINDY4F8WBC2 141 aa12.41□□□□□ -0.42
THBS3-202ENST00000428962 AIPO00170 330 aa12.41□□□□□ -0.42
THBS3-202ENST00000428962 KHNYNO15037 678 aaKnown RBP12.41□□□□□ -0.42
THBS3-202ENST00000428962 SCO2O43819 266 aa12.41□□□□□ -0.42
THBS3-202ENST00000428962 GMFGO60234 142 aa12.41□□□□□ -0.42
THBS3-202ENST00000428962 SUSD5O60279 629 aa12.41□□□□□ -0.42
THBS3-202ENST00000428962 ZFPL1O95159 310 aa12.41□□□□□ -0.42
THBS3-202ENST00000428962 YES1P07947 543 aa12.41□□□□□ -0.42
THBS3-202ENST00000428962 GIMD1P0DJR0 217 aa12.41□□□□□ -0.42
THBS3-202ENST00000428962 OR8G3PP0DMU2 310 aa12.41□□□□□ -0.42
THBS3-202ENST00000428962 PNLIPP16233 465 aa12.41□□□□□ -0.42
THBS3-202ENST00000428962 BLVRAP53004 296 aa12.41□□□□□ -0.42
THBS3-202ENST00000428962 RAB25P57735 213 aa12.41□□□□□ -0.42
THBS3-202ENST00000428962 ACY1Q03154 408 aa12.41□□□□□ -0.42
THBS3-202ENST00000428962 ALKBH1Q13686 389 aaKnown RBP12.41□□□□□ -0.42
THBS3-202ENST00000428962 BCL2A1Q16548 175 aa12.41□□□□□ -0.42
THBS3-202ENST00000428962 FAM69AQ5T7M9 428 aa12.41□□□□□ -0.42
THBS3-202ENST00000428962 ASB18Q6ZVZ8 466 aa12.41□□□□□ -0.42
THBS3-202ENST00000428962 GRINAQ7Z429 371 aa12.41□□□□□ -0.42
THBS3-202ENST00000428962 TCTE3Q8IZS6 198 aa12.41□□□□□ -0.42
THBS3-202ENST00000428962 OR5H6Q8NGV6 325 aa12.41□□□□□ -0.42
THBS3-202ENST00000428962 OR6N2Q8NGY6 317 aa12.41□□□□□ -0.42
THBS3-202ENST00000428962 OR5AK2Q8NH90 309 aa12.41□□□□□ -0.42
THBS3-202ENST00000428962 METTL21AQ8WXB1 218 aa12.41□□□□□ -0.42
THBS3-202ENST00000428962 THRSPQ92748 146 aa12.41□□□□□ -0.42
THBS3-202ENST00000428962 ZNF524Q96C55 264 aa12.41□□□□□ -0.42
THBS3-202ENST00000428962 DMRTB1Q96MA1 342 aa12.41□□□□□ -0.42
THBS3-202ENST00000428962 TSSK2Q96PF2 358 aa12.41□□□□□ -0.42
THBS3-202ENST00000428962 DERL3Q96Q80 235 aa12.41□□□□□ -0.42
THBS3-202ENST00000428962 ABHD1Q96SE0 405 aa12.41□□□□□ -0.42
THBS3-202ENST00000428962 ELF4Q99607 663 aaPredicted RBP12.41□□□□□ -0.42
THBS3-202ENST00000428962 SMAD5Q99717 465 aaKnown RBP12.41□□□□□ -0.42
THBS3-202ENST00000428962 C7orf50Q9BRJ6 194 aaKnown RBP12.41□□□□□ -0.42
THBS3-202ENST00000428962 NUDT22Q9BRQ3 303 aa12.41□□□□□ -0.42
THBS3-202ENST00000428962 TMEM165Q9HC07 324 aa12.41□□□□□ -0.42
THBS3-202ENST00000428962 CTSFQ9UBX1 484 aa12.41□□□□□ -0.42
THBS3-202ENST00000428962 ZNF346Q9UL40 294 aaKnown RBP12.41□□□□□ -0.42
THBS3-202ENST00000428962 AK6Q9Y3D8 172 aaKnown RBP12.41□□□□□ -0.42
THBS3-202ENST00000428962 GON4LQ3T8J9 2241 aa12.4□□□□□ -0.42
THBS3-202ENST00000428962 TMED7-TICAM2A0A0A6YYA0 188 aa12.4□□□□□ -0.42
THBS3-202ENST00000428962 C4orf47A7E2U8 309 aa12.4□□□□□ -0.42
THBS3-202ENST00000428962 A8MVM7 634 aa12.4□□□□□ -0.42
THBS3-202ENST00000428962 PRR33A8MZF0 331 aa12.4□□□□□ -0.42
THBS3-202ENST00000428962 CTDSPLO15194 276 aa12.4□□□□□ -0.42
THBS3-202ENST00000428962 FADS1O60427 444 aa12.4□□□□□ -0.42
THBS3-202ENST00000428962 SLC26A5P58743 744 aa12.4□□□□□ -0.42
THBS3-202ENST00000428962 NANOS3P60323 173 aaKnown RBP12.4□□□□□ -0.42
THBS3-202ENST00000428962 ZXDAP98168 799 aa12.4□□□□□ -0.42
THBS3-202ENST00000428962 TOMM34Q15785 309 aaPredicted RBP12.4□□□□□ -0.42
THBS3-202ENST00000428962 Q499Y3 187 aa12.4□□□□□ -0.42
THBS3-202ENST00000428962 TMEM71Q6P5X7 295 aa12.4□□□□□ -0.42
THBS3-202ENST00000428962 POMZP3Q6PJE2 187 aa12.4□□□□□ -0.42
THBS3-202ENST00000428962 NOXA1Q86UR1 476 aa12.4□□□□□ -0.42
THBS3-202ENST00000428962 GLCCI1Q86VQ1 547 aa12.4□□□□□ -0.42
THBS3-202ENST00000428962 TOMM5Q8N4H5 51 aa12.4□□□□□ -0.42
THBS3-202ENST00000428962 LGALS14Q8TCE9 139 aa12.4□□□□□ -0.42
THBS3-202ENST00000428962 STK35Q8TDR2 534 aa12.4□□□□□ -0.42
THBS3-202ENST00000428962 TMEM234Q8WY98 164 aa12.4□□□□□ -0.42
THBS3-202ENST00000428962 DUSP23Q9BVJ7 150 aa12.4□□□□□ -0.42
THBS3-202ENST00000428962 COMMD4Q9H0A8 199 aa12.4□□□□□ -0.42
THBS3-202ENST00000428962 TP63Q9H3D4 680 aaPredicted RBP12.4□□□□□ -0.42
THBS3-202ENST00000428962 DPAGT1Q9H3H5 408 aa12.4□□□□□ -0.42
THBS3-202ENST00000428962 CCDC86Q9H6F5 360 aaKnown RBP12.4□□□□□ -0.42
THBS3-202ENST00000428962 RANGRFQ9HD47 186 aaPredicted RBP12.4□□□□□ -0.42
THBS3-202ENST00000428962 ING3Q9NXR8 418 aa12.4□□□□□ -0.42
THBS3-202ENST00000428962 TAS2R10Q9NYW0 307 aa12.4□□□□□ -0.42
THBS3-202ENST00000428962 MRM2Q9UI43 246 aaKnown RBP12.4□□□□□ -0.42
THBS3-202ENST00000428962 IKZF2Q9UKS7 526 aa12.4□□□□□ -0.42
THBS3-202ENST00000428962 RBMX2Q9Y388 322 aaKnown RBP12.4□□□□□ -0.42
THBS3-202ENST00000428962 TMED7Q9Y3B3 224 aa12.4□□□□□ -0.42
THBS3-202ENST00000428962 FKBP7Q9Y680 259 aa12.4□□□□□ -0.42
THBS3-202ENST00000428962 ARPC4-TTLL3A0A0A6YYG9 625 aa12.39□□□□□ -0.43
THBS3-202ENST00000428962 ACOD1A6NK06 481 aa12.39□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms