RNA–Protein interactions for RNA: ENST00000428842.1

HMGCLL1-206, Transcript of 3-hydroxymethyl-3-methylglutaryl-CoA lyase like 1, humanhuman

TSL 1 (best) BASIC

Gene HMGCLL1, Length 2,437 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLL1-206ENST00000428842 FTCDNL1E5RQL4 147 aa8.52□□□□□ -1.05
HMGCLL1-206ENST00000428842 PTGES3LE9PB15 166 aa8.52□□□□□ -1.05
HMGCLL1-206ENST00000428842 KLRC4-KLRK1H3BQV0 150 aa8.52□□□□□ -1.05
HMGCLL1-206ENST00000428842 J3QRK9 145 aa8.52□□□□□ -1.05
HMGCLL1-206ENST00000428842 SULT2B1O00204 365 aa8.52□□□□□ -1.05
HMGCLL1-206ENST00000428842 AQP8O94778 261 aa8.52□□□□□ -1.05
HMGCLL1-206ENST00000428842 GLSO94925 669 aaPredicted RBP8.52□□□□□ -1.05
HMGCLL1-206ENST00000428842 HNRNPCP07910 306 aaKnown RBP eCLIP8.52□□□□□ -1.05
HMGCLL1-206ENST00000428842 OSMP13725 252 aa8.52□□□□□ -1.05
HMGCLL1-206ENST00000428842 ANXA8P13928 327 aa8.52□□□□□ -1.05
HMGCLL1-206ENST00000428842 HIST1H1CP16403 213 aaKnown RBP8.52□□□□□ -1.05
HMGCLL1-206ENST00000428842 IFNA8P32881 189 aa8.52□□□□□ -1.05
HMGCLL1-206ENST00000428842 GIPRP48546 466 aa8.52□□□□□ -1.05
HMGCLL1-206ENST00000428842 HCCSP53701 268 aa8.52□□□□□ -1.05
HMGCLL1-206ENST00000428842 FMODQ06828 376 aa8.52□□□□□ -1.05
HMGCLL1-206ENST00000428842 DOC2BQ14184 412 aa8.52□□□□□ -1.05
HMGCLL1-206ENST00000428842 ZNF362Q5T0B9 420 aaPredicted RBP8.52□□□□□ -1.05
HMGCLL1-206ENST00000428842 SYT6Q5T7P8 510 aaPredicted RBP8.52□□□□□ -1.05
HMGCLL1-206ENST00000428842 ZNF440Q8IYI8 595 aa8.52□□□□□ -1.05
HMGCLL1-206ENST00000428842 GCNT2Q8N0V5 402 aa8.52□□□□□ -1.05
HMGCLL1-206ENST00000428842 GTPBP8Q8N3Z3 284 aaPredicted RBP8.52□□□□□ -1.05
HMGCLL1-206ENST00000428842 FNDC9Q8TBE3 224 aa8.52□□□□□ -1.05
HMGCLL1-206ENST00000428842 SNRNP27Q8WVK2 155 aaKnown RBP8.52□□□□□ -1.05
HMGCLL1-206ENST00000428842 NMNAT3Q96T66 252 aa8.52□□□□□ -1.05
HMGCLL1-206ENST00000428842 DKK4Q9UBT3 224 aa8.52□□□□□ -1.05
HMGCLL1-206ENST00000428842 BOKQ9UMX3 212 aaPredicted RBP8.52□□□□□ -1.05
HMGCLL1-206ENST00000428842 KLF13Q9Y2Y9 288 aaPredicted RBP8.52□□□□□ -1.05
HMGCLL1-206ENST00000428842 TPRKBQ9Y3C4 175 aa8.52□□□□□ -1.05
HMGCLL1-206ENST00000428842 NCOA6Q14686 2063 aaPredicted RBP8.52□□□□□ -1.05
HMGCLL1-206ENST00000428842 TEX13CA0A0J9YWL9 993 aa8.52□□□□□ -1.05
HMGCLL1-206ENST00000428842 MS4A18H0YCH9 400 aa8.52□□□□□ -1.05
HMGCLL1-206ENST00000428842 RNF13O43567 381 aa8.52□□□□□ -1.05
HMGCLL1-206ENST00000428842 PTP4A3O75365 173 aa8.52□□□□□ -1.05
HMGCLL1-206ENST00000428842 OR7A10O76100 309 aa8.52□□□□□ -1.05
HMGCLL1-206ENST00000428842 ADAP00813 363 aa8.52□□□□□ -1.05
HMGCLL1-206ENST00000428842 ASAH2BP0C7U1 165 aa8.52□□□□□ -1.05
HMGCLL1-206ENST00000428842 POU3F2P20265 443 aaPredicted RBP8.52□□□□□ -1.05
HMGCLL1-206ENST00000428842 FPR3P25089 353 aa8.52□□□□□ -1.05
HMGCLL1-206ENST00000428842 LHX2P50458 406 aa8.52□□□□□ -1.05
HMGCLL1-206ENST00000428842 POU3F1Q03052 451 aaPredicted RBP8.52□□□□□ -1.05
HMGCLL1-206ENST00000428842 MS4A18Q3C1V0 323 aa8.52□□□□□ -1.05
HMGCLL1-206ENST00000428842 C3orf33Q6P1S2 294 aa8.52□□□□□ -1.05
HMGCLL1-206ENST00000428842 FGD2Q7Z6J4 655 aa8.52□□□□□ -1.05
HMGCLL1-206ENST00000428842 MISPQ8IVT2 679 aa8.52□□□□□ -1.05
HMGCLL1-206ENST00000428842 OR10D3Q8NH80 312 aa8.52□□□□□ -1.05
HMGCLL1-206ENST00000428842 TMEM234Q8WY98 164 aa8.52□□□□□ -1.05
HMGCLL1-206ENST00000428842 ST8SIA1Q92185 356 aa8.52□□□□□ -1.05
HMGCLL1-206ENST00000428842 MRGPRX4Q96LA9 322 aa8.52□□□□□ -1.05
HMGCLL1-206ENST00000428842 HS6ST2Q96MM7 605 aa8.52□□□□□ -1.05
HMGCLL1-206ENST00000428842 ERMAPQ96PL5 475 aaPredicted RBP8.52□□□□□ -1.05
HMGCLL1-206ENST00000428842 SIGLEC11Q96RL6 698 aa8.52□□□□□ -1.05
HMGCLL1-206ENST00000428842 SECISBP2Q96T21 854 aaKnown RBP8.52□□□□□ -1.05
HMGCLL1-206ENST00000428842 PITX2Q99697 317 aa8.52□□□□□ -1.05
HMGCLL1-206ENST00000428842 AKIP1Q9NQ31 210 aa8.52□□□□□ -1.05
HMGCLL1-206ENST00000428842 ASF1BQ9NVP2 202 aa8.52□□□□□ -1.05
HMGCLL1-206ENST00000428842 ERVK-18Q9QC07 812 aa8.52□□□□□ -1.05
HMGCLL1-206ENST00000428842 ING1Q9UK53 422 aaPredicted RBP8.52□□□□□ -1.05
HMGCLL1-206ENST00000428842 MGAT4BQ9UQ53 548 aa8.52□□□□□ -1.05
HMGCLL1-206ENST00000428842 POFUT2Q9Y2G5 429 aa8.52□□□□□ -1.05
HMGCLL1-206ENST00000428842 CADP27708 2225 aa8.52□□□□□ -1.05
HMGCLL1-206ENST00000428842 ESPL1Q14674 2120 aa8.51□□□□□ -1.05
HMGCLL1-206ENST00000428842 AKAP6Q13023 2319 aa8.51□□□□□ -1.05
HMGCLL1-206ENST00000428842 FAM208BQ5VWN6 2430 aa8.51□□□□□ -1.05
HMGCLL1-206ENST00000428842 IGKV1D-43A0A0B4J1Z2 117 aa8.51□□□□□ -1.05
HMGCLL1-206ENST00000428842 LIPT2A6NK58 231 aa8.51□□□□□ -1.05
HMGCLL1-206ENST00000428842 SLC22A1O15245 554 aa8.51□□□□□ -1.05
HMGCLL1-206ENST00000428842 MAGEB4O15481 346 aaPredicted RBP8.51□□□□□ -1.05
HMGCLL1-206ENST00000428842 WBP4O75554 376 aaKnown RBP8.51□□□□□ -1.05
HMGCLL1-206ENST00000428842 TGM6O95932 706 aa8.51□□□□□ -1.05
HMGCLL1-206ENST00000428842 OCM2P0CE71 109 aa8.51□□□□□ -1.05
HMGCLL1-206ENST00000428842 OCMP0CE72 109 aaPredicted RBP8.51□□□□□ -1.05
HMGCLL1-206ENST00000428842 LCN1P31025 176 aa8.51□□□□□ -1.05
HMGCLL1-206ENST00000428842 SRD5A2P31213 254 aa8.51□□□□□ -1.05
HMGCLL1-206ENST00000428842 OPRL1P41146 370 aa8.51□□□□□ -1.05
HMGCLL1-206ENST00000428842 SMIM11AP58511 58 aa8.51□□□□□ -1.05
HMGCLL1-206ENST00000428842 CTXN1P60606 82 aa8.51□□□□□ -1.05
HMGCLL1-206ENST00000428842 ZNF846Q147U1 533 aa8.51□□□□□ -1.05
HMGCLL1-206ENST00000428842 MAD2L1BPQ15013 274 aaPredicted RBP8.51□□□□□ -1.05
HMGCLL1-206ENST00000428842 TMEM44Q2T9K0 475 aa8.51□□□□□ -1.05
HMGCLL1-206ENST00000428842 CRTC2Q53ET0 693 aaPredicted RBP8.51□□□□□ -1.05
HMGCLL1-206ENST00000428842 TMPRSS11FQ6ZWK6 438 aa8.51□□□□□ -1.05
HMGCLL1-206ENST00000428842 NANOGNBQ7Z5D8 188 aa8.51□□□□□ -1.05
HMGCLL1-206ENST00000428842 GNPDA2Q8TDQ7 276 aa8.51□□□□□ -1.05
HMGCLL1-206ENST00000428842 RORBQ92753 470 aa8.51□□□□□ -1.05
HMGCLL1-206ENST00000428842 OSTF1Q92882 214 aa8.51□□□□□ -1.05
HMGCLL1-206ENST00000428842 SNRNP40Q96DI7 357 aaKnown RBP8.51□□□□□ -1.05
HMGCLL1-206ENST00000428842 FAM210AQ96ND0 272 aa8.51□□□□□ -1.05
HMGCLL1-206ENST00000428842 ZNF385AQ96PM9 386 aaKnown RBP8.51□□□□□ -1.05
HMGCLL1-206ENST00000428842 TSPAN32Q96QS1 320 aa8.51□□□□□ -1.05
HMGCLL1-206ENST00000428842 TIMP4Q99727 224 aa8.51□□□□□ -1.05
HMGCLL1-206ENST00000428842 APOL4Q9BPW4 351 aa8.51□□□□□ -1.05
HMGCLL1-206ENST00000428842 CHCHD3Q9NX63 227 aaKnown RBP8.51□□□□□ -1.05
HMGCLL1-206ENST00000428842 TRAV36DV7A0A075B6V5 113 aa8.51□□□□□ -1.05
HMGCLL1-206ENST00000428842 TRAV17A0A0B4J275 112 aa8.51□□□□□ -1.05
HMGCLL1-206ENST00000428842 FUOMA2VDF0 154 aa8.51□□□□□ -1.05
HMGCLL1-206ENST00000428842 ZAR1LA6NP61 321 aa8.51□□□□□ -1.05
HMGCLL1-206ENST00000428842 CLDN25C9JDP6 229 aa8.51□□□□□ -1.05
HMGCLL1-206ENST00000428842 BHLHE40O14503 412 aa8.51□□□□□ -1.05
HMGCLL1-206ENST00000428842 AHSA1O95433 338 aa8.51□□□□□ -1.05
HMGCLL1-206ENST00000428842 MRPL3P09001 348 aaKnown RBP8.51□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms