RNA–Protein interactions for RNA: ENST00000427897.1

HSPG2-205, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 5

Gene HSPG2, Length 589 nt, Biotype non stop decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-205ENST00000427897 OR2M2Q96R28 347 aa18.08■□□□□ 0.48
HSPG2-205ENST00000427897 DHRS9Q9BPW9 319 aa18.08■□□□□ 0.48
HSPG2-205ENST00000427897 CRLF2Q9HC73 371 aa18.08■□□□□ 0.48
HSPG2-205ENST00000427897 GPR35Q9HC97 309 aa18.08■□□□□ 0.48
HSPG2-205ENST00000427897 MOV10Q9HCE1 1003 aaKnown RBP18.08■□□□□ 0.48
HSPG2-205ENST00000427897 DLL4Q9NR61 685 aa18.08■□□□□ 0.48
HSPG2-205ENST00000427897 USP22Q9UPT9 525 aa18.08■□□□□ 0.48
HSPG2-205ENST00000427897 SLC35F4A4IF30 521 aa18.07■□□□□ 0.48
HSPG2-205ENST00000427897 E7EQL1 145 aa18.07■□□□□ 0.48
HSPG2-205ENST00000427897 PLPP3O14495 311 aa18.07■□□□□ 0.48
HSPG2-205ENST00000427897 RNF13O43567 381 aa18.07■□□□□ 0.48
HSPG2-205ENST00000427897 ZNF432O94892 652 aa18.07■□□□□ 0.48
HSPG2-205ENST00000427897 BMP4P12644 408 aa18.07■□□□□ 0.48
HSPG2-205ENST00000427897 HLA-DOBP13765 273 aa18.07■□□□□ 0.48
HSPG2-205ENST00000427897 HOXB1P14653 301 aaPredicted RBP18.07■□□□□ 0.48
HSPG2-205ENST00000427897 TNFRSF1BP20333 461 aa18.07■□□□□ 0.48
HSPG2-205ENST00000427897 PRDX6P30041 224 aa18.07■□□□□ 0.48
HSPG2-205ENST00000427897 KDELR2P33947 212 aa18.07■□□□□ 0.48
HSPG2-205ENST00000427897 SLC25A3Q00325 362 aa18.07■□□□□ 0.48
HSPG2-205ENST00000427897 SPOCK1Q08629 439 aa18.07■□□□□ 0.48
HSPG2-205ENST00000427897 CEACAM16Q2WEN9 425 aa18.07■□□□□ 0.48
HSPG2-205ENST00000427897 CYBRD1Q53TN4 286 aa18.07■□□□□ 0.48
HSPG2-205ENST00000427897 CLEC9AQ6UXN8 241 aa18.07■□□□□ 0.48
HSPG2-205ENST00000427897 PXKQ7Z7A4 578 aa18.07■□□□□ 0.48
HSPG2-205ENST00000427897 MICU2Q8IYU8 434 aa18.07■□□□□ 0.48
HSPG2-205ENST00000427897 ANKK1Q8NFD2 765 aa18.07■□□□□ 0.48
HSPG2-205ENST00000427897 IGFBPL1Q8WX77 278 aa18.07■□□□□ 0.48
HSPG2-205ENST00000427897 BCL2L2Q92843 193 aaPredicted RBP18.07■□□□□ 0.48
HSPG2-205ENST00000427897 ADAD1Q96M93 576 aaKnown RBP18.07■□□□□ 0.48
HSPG2-205ENST00000427897 HOPXQ9BPY8 73 aaPredicted RBP18.07■□□□□ 0.48
HSPG2-205ENST00000427897 TRAF4Q9BUZ4 470 aaPredicted RBP18.07■□□□□ 0.48
HSPG2-205ENST00000427897 MED29Q9NX70 200 aa18.07■□□□□ 0.48
HSPG2-205ENST00000427897 MOKQ9UQ07 419 aa18.07■□□□□ 0.48
HSPG2-205ENST00000427897 POFUT2Q9Y2G5 429 aa18.07■□□□□ 0.48
HSPG2-205ENST00000427897 PRR14LQ5THK1 2151 aa18.06■□□□□ 0.48
HSPG2-205ENST00000427897 RPL36A-HNRNPH2H7BZ11 118 aa18.06■□□□□ 0.48
HSPG2-205ENST00000427897 TRAF3IP2O43734 574 aaPredicted RBP18.06■□□□□ 0.48
HSPG2-205ENST00000427897 FZD7O75084 574 aa18.06■□□□□ 0.48
HSPG2-205ENST00000427897 HPRP00739 348 aa18.06■□□□□ 0.48
HSPG2-205ENST00000427897 CRYAAP02489 173 aa18.06■□□□□ 0.48
HSPG2-205ENST00000427897 TTKP33981 857 aa18.06■□□□□ 0.48
HSPG2-205ENST00000427897 OR1E2P47887 323 aa18.06■□□□□ 0.48
HSPG2-205ENST00000427897 CAMK2DQ13557 499 aa18.06■□□□□ 0.48
HSPG2-205ENST00000427897 LINGO2Q7L985 606 aa18.06■□□□□ 0.48
HSPG2-205ENST00000427897 MUC15Q8N387 334 aa18.06■□□□□ 0.48
HSPG2-205ENST00000427897 MAGEE2Q8TD90 523 aaPredicted RBP18.06■□□□□ 0.48
HSPG2-205ENST00000427897 SLC38A2Q96QD8 506 aa18.06■□□□□ 0.48
HSPG2-205ENST00000427897 SLC19A3Q9BZV2 496 aa18.06■□□□□ 0.48
HSPG2-205ENST00000427897 POLR2J2Q9GZM3 115 aaKnown RBP18.06■□□□□ 0.48
HSPG2-205ENST00000427897 PCDHAC1Q9H158 963 aa18.06■□□□□ 0.48
HSPG2-205ENST00000427897 POLR2J3Q9H1A7 115 aaKnown RBP18.06■□□□□ 0.48
HSPG2-205ENST00000427897 CBLN4Q9NTU7 201 aa18.06■□□□□ 0.48
HSPG2-205ENST00000427897 TRIM64A6NGJ6 449 aa18.05■□□□□ 0.48
HSPG2-205ENST00000427897 TRIM64BA6NI03 449 aa18.05■□□□□ 0.48
HSPG2-205ENST00000427897 OVOL3O00110 214 aa18.05■□□□□ 0.48
HSPG2-205ENST00000427897 TUBA1BP68363 451 aa18.05■□□□□ 0.48
HSPG2-205ENST00000427897 TUBA4AP68366 448 aa18.05■□□□□ 0.48
HSPG2-205ENST00000427897 CHRNB3Q05901 458 aa18.05■□□□□ 0.48
HSPG2-205ENST00000427897 ETFDHQ16134 617 aa18.05■□□□□ 0.48
HSPG2-205ENST00000427897 ZNF74Q16587 644 aa18.05■□□□□ 0.48
HSPG2-205ENST00000427897 CLEC12BQ2HXU8 276 aa18.05■□□□□ 0.48
HSPG2-205ENST00000427897 WDR88Q6ZMY6 472 aa18.05■□□□□ 0.48
HSPG2-205ENST00000427897 TUBA1AQ71U36 451 aa18.05■□□□□ 0.48
HSPG2-205ENST00000427897 TREML1Q86YW5 311 aa18.05■□□□□ 0.48
HSPG2-205ENST00000427897 BOD1Q96IK1 185 aa18.05■□□□□ 0.48
HSPG2-205ENST00000427897 TXNDC15Q96J42 360 aa18.05■□□□□ 0.48
HSPG2-205ENST00000427897 LRR1Q96L50 414 aa18.05■□□□□ 0.48
HSPG2-205ENST00000427897 SMR3AQ99954 134 aa18.05■□□□□ 0.48
HSPG2-205ENST00000427897 ULBP2Q9BZM5 246 aa18.05■□□□□ 0.48
HSPG2-205ENST00000427897 BARX1Q9HBU1 254 aaPredicted RBP18.05■□□□□ 0.48
HSPG2-205ENST00000427897 RIMS3Q9UJD0 308 aa18.05■□□□□ 0.48
HSPG2-205ENST00000427897 TEP1Q99973 2627 aaKnown RBP18.04■□□□□ 0.48
HSPG2-205ENST00000427897 ARPC4-TTLL3A0A0A6YYG9 625 aa18.04■□□□□ 0.48
HSPG2-205ENST00000427897 BLOC1S5-TXNDC5H3BN57 136 aa18.04■□□□□ 0.48
HSPG2-205ENST00000427897 APOBEC3AP31941 199 aaPredicted RBP18.04■□□□□ 0.48
HSPG2-205ENST00000427897 NUDT2P50583 147 aa18.04■□□□□ 0.48
HSPG2-205ENST00000427897 BIDP55957 195 aa18.04■□□□□ 0.48
HSPG2-205ENST00000427897 SELENOWP63302 87 aa18.04■□□□□ 0.48
HSPG2-205ENST00000427897 LIPEQ05469 1076 aa18.04■□□□□ 0.48
HSPG2-205ENST00000427897 ZNF544Q6NX49 715 aa18.04■□□□□ 0.48
HSPG2-205ENST00000427897 Q71RC1 249 aaPredicted RBP18.04■□□□□ 0.48
HSPG2-205ENST00000427897 NANOGNBQ7Z5D8 188 aa18.04■□□□□ 0.48
HSPG2-205ENST00000427897 DTX2Q86UW9 622 aa18.04■□□□□ 0.48
HSPG2-205ENST00000427897 CCDC36Q8IYA8 594 aa18.04■□□□□ 0.48
HSPG2-205ENST00000427897 C20orf196Q8IYI0 205 aa18.04■□□□□ 0.48
HSPG2-205ENST00000427897 TMEM123Q8N131 208 aa18.04■□□□□ 0.48
HSPG2-205ENST00000427897 GRIP2Q9C0E4 1043 aa18.04■□□□□ 0.48
HSPG2-205ENST00000427897 ZNF229Q9UJW7 825 aa18.04■□□□□ 0.48
HSPG2-205ENST00000427897 PMF1-BGLAPU3KQ54 211 aa18.04■□□□□ 0.48
HSPG2-205ENST00000427897 MAP1AP78559 2803 aaPredicted RBP18.03■□□□□ 0.48
HSPG2-205ENST00000427897 IGHV1-18A0A0C4DH31 117 aa18.03■□□□□ 0.48
HSPG2-205ENST00000427897 VSTM5A8MXK1 200 aa18.03■□□□□ 0.48
HSPG2-205ENST00000427897 ZNF99A8MXY4 864 aaPredicted RBP18.03■□□□□ 0.48
HSPG2-205ENST00000427897 ATP6V1G2-DDX39BF2Z307 99 aa18.03■□□□□ 0.48
HSPG2-205ENST00000427897 OR5F1O95221 314 aa18.03■□□□□ 0.48
HSPG2-205ENST00000427897 ZNF682O95780 498 aa18.03■□□□□ 0.48
HSPG2-205ENST00000427897 CD8AP01732 235 aa18.03■□□□□ 0.48
HSPG2-205ENST00000427897 THY1P04216 161 aa18.03■□□□□ 0.48
HSPG2-205ENST00000427897 IFNGR1P15260 489 aa18.03■□□□□ 0.48
HSPG2-205ENST00000427897 CSNK1A1P48729 337 aa18.03■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms