RNA–Protein interactions for RNA: ENST00000419277.5

HLA-DPA1-242, Transcript of major histocompatibility complex, class II, DP alpha 1, humanhuman

APPRIS P2 BASIC

Gene HLA-DPA1, Length 1,704 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPA1-242ENST00000419277 MAP2K3P46734 347 aa13.18□□□□□ -0.3
HLA-DPA1-242ENST00000419277 PITPNBP48739 271 aa13.18□□□□□ -0.3
HLA-DPA1-242ENST00000419277 CCL7P80098 99 aa13.18□□□□□ -0.3
HLA-DPA1-242ENST00000419277 LTBQ06643 244 aa13.18□□□□□ -0.3
HLA-DPA1-242ENST00000419277 ZP4Q12836 540 aa13.18□□□□□ -0.3
HLA-DPA1-242ENST00000419277 CPEB2Q7Z5Q1 589 aaKnown RBP13.18□□□□□ -0.3
HLA-DPA1-242ENST00000419277 UBQLNLQ8IYU4 475 aa13.18□□□□□ -0.3
HLA-DPA1-242ENST00000419277 ZNF454Q8N9F8 522 aa13.18□□□□□ -0.3
HLA-DPA1-242ENST00000419277 DUSP18Q8NEJ0 188 aa13.18□□□□□ -0.3
HLA-DPA1-242ENST00000419277 MFSD8Q8NHS3 518 aa13.18□□□□□ -0.3
HLA-DPA1-242ENST00000419277 INTS14Q96SY0 518 aa13.18□□□□□ -0.3
HLA-DPA1-242ENST00000419277 PTDSS2Q9BVG9 487 aa13.18□□□□□ -0.3
HLA-DPA1-242ENST00000419277 NRSN2Q9GZP1 204 aa13.18□□□□□ -0.3
HLA-DPA1-242ENST00000419277 AKAP7Q9P0M2 348 aaPredicted RBP13.18□□□□□ -0.3
HLA-DPA1-242ENST00000419277 EXTL2Q9UBQ6 330 aa13.18□□□□□ -0.3
HLA-DPA1-242ENST00000419277 LAMP5Q9UJQ1 280 aa13.18□□□□□ -0.3
HLA-DPA1-242ENST00000419277 RASD1Q9Y272 281 aa13.18□□□□□ -0.3
HLA-DPA1-242ENST00000419277 DNAH14Q0VDD8 3507 aa13.17□□□□□ -0.3
HLA-DPA1-242ENST00000419277 TNFSF12-TNFSF13A0A0A6YY99 330 aa13.17□□□□□ -0.3
HLA-DPA1-242ENST00000419277 A0A0G2JK05 382 aa13.17□□□□□ -0.3
HLA-DPA1-242ENST00000419277 A0A1W2PRG6 482 aa13.17□□□□□ -0.3
HLA-DPA1-242ENST00000419277 PRSS37A4D1T9 235 aa13.17□□□□□ -0.3
HLA-DPA1-242ENST00000419277 CDC14CA4D256 554 aa13.17□□□□□ -0.3
HLA-DPA1-242ENST00000419277 UBL3O95164 117 aa13.17□□□□□ -0.3
HLA-DPA1-242ENST00000419277 PRKCAP17252 672 aa13.17□□□□□ -0.3
HLA-DPA1-242ENST00000419277 CCKBRP32239 447 aa13.17□□□□□ -0.3
HLA-DPA1-242ENST00000419277 RFX2P48378 723 aa13.17□□□□□ -0.3
HLA-DPA1-242ENST00000419277 DAP3P51398 398 aaKnown RBP13.17□□□□□ -0.3
HLA-DPA1-242ENST00000419277 SLC25A53Q5H9E4 307 aa13.17□□□□□ -0.3
HLA-DPA1-242ENST00000419277 PWWP2BQ6NUJ5 590 aa13.17□□□□□ -0.3
HLA-DPA1-242ENST00000419277 FDX2Q6P4F2 183 aa13.17□□□□□ -0.3
HLA-DPA1-242ENST00000419277 TMEM81Q6P7N7 255 aa13.17□□□□□ -0.3
HLA-DPA1-242ENST00000419277 PLET1Q6UQ28 207 aa13.17□□□□□ -0.3
HLA-DPA1-242ENST00000419277 HDDC2Q7Z4H3 204 aa13.17□□□□□ -0.3
HLA-DPA1-242ENST00000419277 PRSS58Q8IYP2 241 aa13.17□□□□□ -0.3
HLA-DPA1-242ENST00000419277 ZNF519Q8TB69 540 aa13.17□□□□□ -0.3
HLA-DPA1-242ENST00000419277 ADAMTS14Q8WXS8 1223 aa13.17□□□□□ -0.3
HLA-DPA1-242ENST00000419277 DDIT4LQ96D03 193 aa13.17□□□□□ -0.3
HLA-DPA1-242ENST00000419277 MRGPRX4Q96LA9 322 aa13.17□□□□□ -0.3
HLA-DPA1-242ENST00000419277 GUCD1Q96NT3 240 aa13.17□□□□□ -0.3
HLA-DPA1-242ENST00000419277 GFM1Q96RP9 751 aaKnown RBP13.17□□□□□ -0.3
HLA-DPA1-242ENST00000419277 SPSB2Q99619 263 aa13.17□□□□□ -0.3
HLA-DPA1-242ENST00000419277 C7orf50Q9BRJ6 194 aaKnown RBP13.17□□□□□ -0.3
HLA-DPA1-242ENST00000419277 COMMD4Q9H0A8 199 aa13.17□□□□□ -0.3
HLA-DPA1-242ENST00000419277 SPATA2Q9UM82 520 aa13.17□□□□□ -0.3
HLA-DPA1-242ENST00000419277 ASCC3Q8N3C0 2202 aaKnown RBP13.17□□□□□ -0.3
HLA-DPA1-242ENST00000419277 SCO2O43819 266 aa13.16□□□□□ -0.3
HLA-DPA1-242ENST00000419277 SYPP08247 313 aa13.16□□□□□ -0.3
HLA-DPA1-242ENST00000419277 EPXP11678 715 aa13.16□□□□□ -0.3
HLA-DPA1-242ENST00000419277 CFPP27918 469 aa13.16□□□□□ -0.3
HLA-DPA1-242ENST00000419277 CASP3P42574 277 aa13.16□□□□□ -0.3
HLA-DPA1-242ENST00000419277 RGS19P49795 217 aa13.16□□□□□ -0.3
HLA-DPA1-242ENST00000419277 TPTEP56180 551 aa13.16□□□□□ -0.3
HLA-DPA1-242ENST00000419277 CAV3P56539 151 aa13.16□□□□□ -0.3
HLA-DPA1-242ENST00000419277 RPS11P62280 158 aaKnown RBP eCLIP13.16□□□□□ -0.3
HLA-DPA1-242ENST00000419277 COL28A1Q2UY09 1125 aa13.16□□□□□ -0.3
HLA-DPA1-242ENST00000419277 Q499Y3 187 aa13.16□□□□□ -0.3
HLA-DPA1-242ENST00000419277 KCTD18Q6PI47 426 aaPredicted RBP13.16□□□□□ -0.3
HLA-DPA1-242ENST00000419277 LRRN1Q6UXK5 716 aa13.16□□□□□ -0.3
HLA-DPA1-242ENST00000419277 ADGRG3Q86Y34 549 aa13.16□□□□□ -0.3
HLA-DPA1-242ENST00000419277 EID2Q8N6I1 236 aa13.16□□□□□ -0.3
HLA-DPA1-242ENST00000419277 ADPRHL1Q8NDY3 354 aa13.16□□□□□ -0.3
HLA-DPA1-242ENST00000419277 OR51L1Q8NGJ5 315 aa13.16□□□□□ -0.3
HLA-DPA1-242ENST00000419277 TRMT10AQ8TBZ6 339 aaKnown RBP13.16□□□□□ -0.3
HLA-DPA1-242ENST00000419277 HGDQ93099 445 aa13.16□□□□□ -0.3
HLA-DPA1-242ENST00000419277 CRB3Q9BUF7 120 aa13.16□□□□□ -0.3
HLA-DPA1-242ENST00000419277 POTEKPQ9BYX7 375 aa13.16□□□□□ -0.3
HLA-DPA1-242ENST00000419277 GAREM1Q9H706 876 aa13.16□□□□□ -0.3
HLA-DPA1-242ENST00000419277 TAS2R5Q9NYW4 299 aa13.16□□□□□ -0.3
HLA-DPA1-242ENST00000419277 PISDQ9UG56 409 aa13.16□□□□□ -0.3
HLA-DPA1-242ENST00000419277 ATXN7L1Q9ULK2 861 aaPredicted RBP13.16□□□□□ -0.3
HLA-DPA1-242ENST00000419277 COPS3Q9UNS2 423 aa13.16□□□□□ -0.3
HLA-DPA1-242ENST00000419277 D6RAR5 112 aa13.16□□□□□ -0.3
HLA-DPA1-242ENST00000419277 AIPO00170 330 aa13.16□□□□□ -0.3
HLA-DPA1-242ENST00000419277 CTDSPLO15194 276 aa13.16□□□□□ -0.3
HLA-DPA1-242ENST00000419277 ABHD16AO95870 558 aa13.16□□□□□ -0.3
HLA-DPA1-242ENST00000419277 F13BP05160 661 aa13.16□□□□□ -0.3
HLA-DPA1-242ENST00000419277 GP1BAP07359 652 aa13.16□□□□□ -0.3
HLA-DPA1-242ENST00000419277 IMPDH2P12268 514 aa13.16□□□□□ -0.3
HLA-DPA1-242ENST00000419277 ELK1P19419 428 aa13.16□□□□□ -0.3
HLA-DPA1-242ENST00000419277 ALOX5APP20292 161 aa13.16□□□□□ -0.3
HLA-DPA1-242ENST00000419277 CCR9P51686 369 aa13.16□□□□□ -0.3
HLA-DPA1-242ENST00000419277 GLO1Q04760 184 aa13.16□□□□□ -0.3
HLA-DPA1-242ENST00000419277 CSTF1Q05048 431 aaKnown RBP13.16□□□□□ -0.3
HLA-DPA1-242ENST00000419277 SIGLEC14Q08ET2 396 aa13.16□□□□□ -0.3
HLA-DPA1-242ENST00000419277 SNTA1Q13424 505 aa13.16□□□□□ -0.3
HLA-DPA1-242ENST00000419277 ALKBH1Q13686 389 aaKnown RBP13.16□□□□□ -0.3
HLA-DPA1-242ENST00000419277 INSL4Q14641 139 aa13.16□□□□□ -0.3
HLA-DPA1-242ENST00000419277 GXYLT1Q4G148 440 aa13.16□□□□□ -0.3
HLA-DPA1-242ENST00000419277 BICRALQ6AI39 1079 aa13.16□□□□□ -0.3
HLA-DPA1-242ENST00000419277 MRPL14Q6P1L8 145 aaKnown RBP13.16□□□□□ -0.3
HLA-DPA1-242ENST00000419277 RPTNQ6XPR3 784 aa13.16□□□□□ -0.3
HLA-DPA1-242ENST00000419277 TMPRSS9Q7Z410 1059 aa13.16□□□□□ -0.3
HLA-DPA1-242ENST00000419277 NR2C2APQ86WQ0 139 aa13.16□□□□□ -0.3
HLA-DPA1-242ENST00000419277 SAMD12Q8N8I0 201 aa13.16□□□□□ -0.3
HLA-DPA1-242ENST00000419277 AGBL5Q8NDL9 886 aa13.16□□□□□ -0.3
HLA-DPA1-242ENST00000419277 OTOSQ8NHW6 89 aa13.16□□□□□ -0.3
HLA-DPA1-242ENST00000419277 IFI44Q8TCB0 444 aa13.16□□□□□ -0.3
HLA-DPA1-242ENST00000419277 NXPE2Q96DL1 559 aa13.16□□□□□ -0.3
HLA-DPA1-242ENST00000419277 FRMD6Q96NE9 622 aa13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms