RNA–Protein interactions for RNA: ENST00000419110.5

HMGB3-202, Transcript of high mobility group box 3, humanhuman

APPRIS ALT2 TSL 3

Gene HMGB3, Length 707 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3-202ENST00000419110 FAM122BQ7Z309 247 aa5.36□□□□□ -1.55
HMGB3-202ENST00000419110 GALNTL5Q7Z4T8 443 aa5.36□□□□□ -1.55
HMGB3-202ENST00000419110 YRDCQ86U90 279 aaKnown RBP5.36□□□□□ -1.55
HMGB3-202ENST00000419110 SATL1Q86VE3 508 aa5.36□□□□□ -1.55
HMGB3-202ENST00000419110 ZNF227Q86WZ6 799 aa5.36□□□□□ -1.55
HMGB3-202ENST00000419110 CPOQ8IVL8 374 aa5.36□□□□□ -1.55
HMGB3-202ENST00000419110 SPARTQ8N0X7 666 aa5.36□□□□□ -1.55
HMGB3-202ENST00000419110 FAM109AQ8N4B1 249 aa5.36□□□□□ -1.55
HMGB3-202ENST00000419110 CYB561A3Q8NBI2 242 aa5.36□□□□□ -1.55
HMGB3-202ENST00000419110 FAM83FQ8NEG4 500 aaPredicted RBP5.36□□□□□ -1.55
HMGB3-202ENST00000419110 NOXO1Q8NFA2 376 aa5.36□□□□□ -1.55
HMGB3-202ENST00000419110 BBS1Q8NFJ9 593 aa5.36□□□□□ -1.55
HMGB3-202ENST00000419110 OR52E2Q8NGJ4 325 aa5.36□□□□□ -1.55
HMGB3-202ENST00000419110 OR51G2Q8NGK0 314 aa5.36□□□□□ -1.55
HMGB3-202ENST00000419110 OR5M1Q8NGP8 315 aa5.36□□□□□ -1.55
HMGB3-202ENST00000419110 OR9Q1Q8NGQ5 310 aa5.36□□□□□ -1.55
HMGB3-202ENST00000419110 OR6K6Q8NGW6 343 aa5.36□□□□□ -1.55
HMGB3-202ENST00000419110 OR2T4Q8NH00 348 aa5.36□□□□□ -1.55
HMGB3-202ENST00000419110 OR4K13Q8NH42 304 aa5.36□□□□□ -1.55
HMGB3-202ENST00000419110 SGCDQ92629 289 aa5.36□□□□□ -1.55
HMGB3-202ENST00000419110 PNPLA2Q96AD5 504 aa5.36□□□□□ -1.55
HMGB3-202ENST00000419110 MIB2Q96AX9 1013 aa5.36□□□□□ -1.55
HMGB3-202ENST00000419110 NTNG2Q96CW9 530 aa5.36□□□□□ -1.55
HMGB3-202ENST00000419110 DNAJA3Q96EY1 480 aa5.36□□□□□ -1.55
HMGB3-202ENST00000419110 SCMH1Q96GD3 660 aa5.36□□□□□ -1.55
HMGB3-202ENST00000419110 CRELD1Q96HD1 420 aa5.36□□□□□ -1.55
HMGB3-202ENST00000419110 TMEM80Q96HE8 168 aa5.36□□□□□ -1.55
HMGB3-202ENST00000419110 ARL5BQ96KC2 179 aa5.36□□□□□ -1.55
HMGB3-202ENST00000419110 Q96M85 177 aa5.36□□□□□ -1.55
HMGB3-202ENST00000419110 GNRHR2Q96P88 292 aa5.36□□□□□ -1.55
HMGB3-202ENST00000419110 SIGLEC11Q96RL6 698 aa5.36□□□□□ -1.55
HMGB3-202ENST00000419110 NAA11Q9BSU3 229 aaPredicted RBP5.36□□□□□ -1.55
HMGB3-202ENST00000419110 TXNIPQ9H3M7 391 aa5.36□□□□□ -1.55
HMGB3-202ENST00000419110 CCDC86Q9H6F5 360 aaKnown RBP5.36□□□□□ -1.55
HMGB3-202ENST00000419110 PROK2Q9HC23 129 aa5.36□□□□□ -1.55
HMGB3-202ENST00000419110 AMBNQ9NP70 447 aa5.36□□□□□ -1.55
HMGB3-202ENST00000419110 ACOT13Q9NPJ3 140 aa5.36□□□□□ -1.55
HMGB3-202ENST00000419110 NRIP3Q9NQ35 241 aa5.36□□□□□ -1.55
HMGB3-202ENST00000419110 INPP5EQ9NRR6 644 aa5.36□□□□□ -1.55
HMGB3-202ENST00000419110 DEPPQ9NTK1 212 aa5.36□□□□□ -1.55
HMGB3-202ENST00000419110 QPCTLQ9NXS2 382 aa5.36□□□□□ -1.55
HMGB3-202ENST00000419110 PLA2G3Q9NZ20 509 aa5.36□□□□□ -1.55
HMGB3-202ENST00000419110 ERVK-18Q9QC07 812 aa5.36□□□□□ -1.55
HMGB3-202ENST00000419110 DIMT1Q9UNQ2 313 aaKnown RBP5.36□□□□□ -1.55
HMGB3-202ENST00000419110 RASD1Q9Y272 281 aa5.36□□□□□ -1.55
HMGB3-202ENST00000419110 ERGIC3Q9Y282 383 aa5.36□□□□□ -1.55
HMGB3-202ENST00000419110 MSRB2Q9Y3D2 182 aa5.36□□□□□ -1.55
HMGB3-202ENST00000419110 PCDHGB1Q9Y5G3 927 aa5.36□□□□□ -1.55
HMGB3-202ENST00000419110 NOX1Q9Y5S8 564 aa5.36□□□□□ -1.55
HMGB3-202ENST00000419110 SPTBN4Q9H254 2564 aa5.36□□□□□ -1.55
HMGB3-202ENST00000419110 PTPRQQ9UMZ3 2332 aa5.35□□□□□ -1.55
HMGB3-202ENST00000419110 DOCK7Q96N67 2140 aa5.35□□□□□ -1.55
HMGB3-202ENST00000419110 LOC100996750A0A140TA64 210 aa5.35□□□□□ -1.55
HMGB3-202ENST00000419110 A0A1W2PNR3 127 aa5.35□□□□□ -1.55
HMGB3-202ENST00000419110 TMEM129A0AVI4 362 aa5.35□□□□□ -1.55
HMGB3-202ENST00000419110 DPPA5A6NC42 116 aa5.35□□□□□ -1.55
HMGB3-202ENST00000419110 PINLYPA6NC86 204 aa5.35□□□□□ -1.55
HMGB3-202ENST00000419110 CCDC182A6NF36 153 aa5.35□□□□□ -1.55
HMGB3-202ENST00000419110 AQP7P3A6NL99 342 aa5.35□□□□□ -1.55
HMGB3-202ENST00000419110 NPIPA2E9PIF3 369 aa5.35□□□□□ -1.55
HMGB3-202ENST00000419110 NPIPA3F8WFD2 350 aa5.35□□□□□ -1.55
HMGB3-202ENST00000419110 MKRN2OSH3BPM6 223 aa5.35□□□□□ -1.55
HMGB3-202ENST00000419110 H7C1C5 153 aa5.35□□□□□ -1.55
HMGB3-202ENST00000419110 PLPP3O14495 311 aa5.35□□□□□ -1.55
HMGB3-202ENST00000419110 EIF1AYO14602 144 aaKnown RBP5.35□□□□□ -1.55
HMGB3-202ENST00000419110 TLX3O43711 291 aaPredicted RBP5.35□□□□□ -1.55
HMGB3-202ENST00000419110 CEACAM4O75871 244 aa5.35□□□□□ -1.55
HMGB3-202ENST00000419110 AKR7A3O95154 331 aa5.35□□□□□ -1.55
HMGB3-202ENST00000419110 VAMP5O95183 116 aa5.35□□□□□ -1.55
HMGB3-202ENST00000419110 APOL3O95236 402 aa5.35□□□□□ -1.55
HMGB3-202ENST00000419110 IGHG1P01857 330 aa5.35□□□□□ -1.55
HMGB3-202ENST00000419110 F13BP05160 661 aa5.35□□□□□ -1.55
HMGB3-202ENST00000419110 TFAP2AP05549 437 aa5.35□□□□□ -1.55
HMGB3-202ENST00000419110 HPNP05981 417 aa5.35□□□□□ -1.55
HMGB3-202ENST00000419110 STSP08842 583 aa5.35□□□□□ -1.55
HMGB3-202ENST00000419110 IMPDH2P12268 514 aa5.35□□□□□ -1.55
HMGB3-202ENST00000419110 SPI1P17947 270 aa5.35□□□□□ -1.55
HMGB3-202ENST00000419110 SPINK2P20155 84 aa5.35□□□□□ -1.55
HMGB3-202ENST00000419110 IL11P20809 199 aa5.35□□□□□ -1.55
HMGB3-202ENST00000419110 SLC2A5P22732 501 aa5.35□□□□□ -1.55
HMGB3-202ENST00000419110 ACVR1BP36896 505 aa5.35□□□□□ -1.55
HMGB3-202ENST00000419110 EIF2S3P41091 472 aaKnown RBP5.35□□□□□ -1.55
HMGB3-202ENST00000419110 MAP2K4P45985 399 aa5.35□□□□□ -1.55
HMGB3-202ENST00000419110 CENPAP49450 140 aa5.35□□□□□ -1.55
HMGB3-202ENST00000419110 TNFSF10P50591 281 aa5.35□□□□□ -1.55
HMGB3-202ENST00000419110 CCL11P51671 97 aa5.35□□□□□ -1.55
HMGB3-202ENST00000419110 BLVRAP53004 296 aa5.35□□□□□ -1.55
HMGB3-202ENST00000419110 TMPRSS3P57727 454 aa5.35□□□□□ -1.55
HMGB3-202ENST00000419110 RPS3AP61247 264 aaKnown RBP5.35□□□□□ -1.55
HMGB3-202ENST00000419110 RPL27P61353 136 aaKnown RBP5.35□□□□□ -1.55
HMGB3-202ENST00000419110 LCN6P62502 163 aa5.35□□□□□ -1.55
HMGB3-202ENST00000419110 ACTA2P62736 377 aa5.35□□□□□ -1.55
HMGB3-202ENST00000419110 RAC1P63000 192 aa5.35□□□□□ -1.55
HMGB3-202ENST00000419110 ACTG2P63267 376 aa5.35□□□□□ -1.55
HMGB3-202ENST00000419110 HSF1Q00613 529 aa5.35□□□□□ -1.55
HMGB3-202ENST00000419110 LTBQ06643 244 aa5.35□□□□□ -1.55
HMGB3-202ENST00000419110 PIGFQ07326 219 aa5.35□□□□□ -1.55
HMGB3-202ENST00000419110 FOXO1Q12778 655 aa5.35□□□□□ -1.55
HMGB3-202ENST00000419110 ZP4Q12836 540 aa5.35□□□□□ -1.55
HMGB3-202ENST00000419110 GGTLC2Q14390 218 aa5.35□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 80.2 ms